RNA–Protein interactions for RNA: ENST00000478843.5

PRKCD-205, Transcript of protein kinase C delta, humanhuman

TSL 4

Gene PRKCD, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-205ENST00000478843 GNPATO15228 680 aa13.35□□□□□ -0.27
PRKCD-205ENST00000478843 TMF1P82094 1093 aa13.35□□□□□ -0.27
PRKCD-205ENST00000478843 PLEKHG2Q9H7P9 1386 aa13.34□□□□□ -0.27
PRKCD-205ENST00000478843 TJP1Q07157 1748 aa13.34□□□□□ -0.27
PRKCD-205ENST00000478843 CARD14Q9BXL6 1004 aa13.33□□□□□ -0.28
PRKCD-205ENST00000478843 TMOD3Q9NYL9 352 aa13.33□□□□□ -0.28
PRKCD-205ENST00000478843 ASAP1Q9ULH1 1129 aa13.33□□□□□ -0.28
PRKCD-205ENST00000478843 TNRC6CQ9HCJ0 1690 aaKnown RBP13.32□□□□□ -0.28
PRKCD-205ENST00000478843 ADAMTS7Q9UKP4 1686 aa13.32□□□□□ -0.28
PRKCD-205ENST00000478843 MMP10P09238 476 aa13.32□□□□□ -0.28
PRKCD-205ENST00000478843 PHKG2P15735 406 aa13.32□□□□□ -0.28
PRKCD-205ENST00000478843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.32□□□□□ -0.28
PRKCD-205ENST00000478843 SPG7Q9UQ90 795 aa13.32□□□□□ -0.28
PRKCD-205ENST00000478843 WASHC2AQ641Q2 1341 aa13.32□□□□□ -0.28
PRKCD-205ENST00000478843 EYA1Q99502 592 aa13.31□□□□□ -0.28
PRKCD-205ENST00000478843 PCNTO95613 3336 aa13.31□□□□□ -0.28
PRKCD-205ENST00000478843 ATP6V1AP38606 617 aa13.3□□□□□ -0.28
PRKCD-205ENST00000478843 ATG3Q9NT62 314 aa13.3□□□□□ -0.28
PRKCD-205ENST00000478843 KDM6AO15550 1401 aaPredicted RBP13.3□□□□□ -0.28
PRKCD-205ENST00000478843 SBF1O95248 1867 aa13.29□□□□□ -0.28
PRKCD-205ENST00000478843 APLP1P51693 650 aa13.29□□□□□ -0.28
PRKCD-205ENST00000478843 IFNL2Q8IZJ0 200 aa13.29□□□□□ -0.28
PRKCD-205ENST00000478843 SLC4A9Q96Q91 983 aa13.29□□□□□ -0.28
PRKCD-205ENST00000478843 DLEC1Q9Y238 1755 aa13.29□□□□□ -0.28
PRKCD-205ENST00000478843 SCN11AQ9UI33 1791 aa13.28□□□□□ -0.28
PRKCD-205ENST00000478843 VIRMAQ69YN4 1812 aaKnown RBP13.28□□□□□ -0.28
PRKCD-205ENST00000478843 PPM1GO15355 546 aaPredicted RBP13.28□□□□□ -0.28
PRKCD-205ENST00000478843 TGFB2P61812 414 aa13.28□□□□□ -0.28
PRKCD-205ENST00000478843 CDCA8Q53HL2 280 aa13.28□□□□□ -0.28
PRKCD-205ENST00000478843 CNTNAP4Q9C0A0 1308 aa13.28□□□□□ -0.28
PRKCD-205ENST00000478843 ADRA2BP18089 450 aa13.27□□□□□ -0.29
PRKCD-205ENST00000478843 DNAJC5GQ8N7S2 189 aa13.27□□□□□ -0.29
PRKCD-205ENST00000478843 PCGF6Q9BYE7 350 aa13.27□□□□□ -0.29
PRKCD-205ENST00000478843 NMRK2Q9NPI5 230 aa13.27□□□□□ -0.29
PRKCD-205ENST00000478843 POLKQ9UBT6 870 aa13.27□□□□□ -0.29
PRKCD-205ENST00000478843 BCS1LQ9Y276 419 aa13.27□□□□□ -0.29
PRKCD-205ENST00000478843 A0A0G2JLW4 131 aa13.26□□□□□ -0.29
PRKCD-205ENST00000478843 TOMM70O94826 608 aa13.26□□□□□ -0.29
PRKCD-205ENST00000478843 GYS1P13807 737 aa13.26□□□□□ -0.29
PRKCD-205ENST00000478843 EIF4A2Q14240 407 aaKnown RBP13.26□□□□□ -0.29
PRKCD-205ENST00000478843 TIAM2Q8IVF5 1701 aa13.26□□□□□ -0.29
PRKCD-205ENST00000478843 RTCBQ9Y3I0 505 aaKnown RBP13.26□□□□□ -0.29
PRKCD-205ENST00000478843 AFDNP55196 1824 aaKnown RBP13.25□□□□□ -0.29
PRKCD-205ENST00000478843 KCPQ6ZWJ8 1503 aa13.25□□□□□ -0.29
PRKCD-205ENST00000478843 DPEP1P16444 411 aa13.25□□□□□ -0.29
PRKCD-205ENST00000478843 RC3H1Q5TC82 1133 aaKnown RBP13.25□□□□□ -0.29
PRKCD-205ENST00000478843 NLGN1Q8N2Q7 840 aa13.25□□□□□ -0.29
PRKCD-205ENST00000478843 CCDC87Q9NVE4 849 aa13.25□□□□□ -0.29
PRKCD-205ENST00000478843 NRXN2Q9P2S2 1712 aa13.25□□□□□ -0.29
PRKCD-205ENST00000478843 TRAPPC3LQ5T215 181 aa13.24□□□□□ -0.29
PRKCD-205ENST00000478843 ARHGEF1Q92888 912 aaKnown RBP13.24□□□□□ -0.29
PRKCD-205ENST00000478843 ERVV-2B6SEH9 535 aa13.23□□□□□ -0.29
PRKCD-205ENST00000478843 FCHSD2O94868 740 aa13.23□□□□□ -0.29
PRKCD-205ENST00000478843 KCNA3P22001 575 aa13.23□□□□□ -0.29
PRKCD-205ENST00000478843 ARHGAP27Q6ZUM4 889 aa13.23□□□□□ -0.29
PRKCD-205ENST00000478843 RBM46Q8TBY0 533 aaKnown RBP13.23□□□□□ -0.29
PRKCD-205ENST00000478843 RPS6KA4O75676 772 aa13.22□□□□□ -0.29
PRKCD-205ENST00000478843 DCAF5Q96JK2 942 aa13.22□□□□□ -0.29
PRKCD-205ENST00000478843 RBM42Q9BTD8 480 aaKnown RBP13.22□□□□□ -0.29
PRKCD-205ENST00000478843 DDR1Q08345 913 aa13.21□□□□□ -0.29
PRKCD-205ENST00000478843 C9orf131Q5VYM1 1079 aa13.21□□□□□ -0.29
PRKCD-205ENST00000478843 PARP3Q9Y6F1 533 aa13.21□□□□□ -0.29
PRKCD-205ENST00000478843 MRC1P22897 1456 aa13.21□□□□□ -0.3
PRKCD-205ENST00000478843 USP42Q9H9J4 1324 aaKnown RBP13.2□□□□□ -0.3
PRKCD-205ENST00000478843 HSP90AB1P08238 724 aaKnown RBP13.2□□□□□ -0.3
PRKCD-205ENST00000478843 RFC4P35249 363 aa13.2□□□□□ -0.3
PRKCD-205ENST00000478843 CCDC88AQ3V6T2 1871 aa13.2□□□□□ -0.3
PRKCD-205ENST00000478843 UBR2Q8IWV8 1755 aa13.2□□□□□ -0.3
PRKCD-205ENST00000478843 CRKLP46109 303 aaKnown RBP13.19□□□□□ -0.3
PRKCD-205ENST00000478843 HTRA3P83110 453 aa13.19□□□□□ -0.3
PRKCD-205ENST00000478843 FKBP8Q14318 412 aa13.19□□□□□ -0.3
PRKCD-205ENST00000478843 ZNF530Q6P9A1 599 aaPredicted RBP13.19□□□□□ -0.3
PRKCD-205ENST00000478843 JMYQ8N9B5 988 aa13.19□□□□□ -0.3
PRKCD-205ENST00000478843 KLRG1Q96E93 195 aa13.19□□□□□ -0.3
PRKCD-205ENST00000478843 SRP68Q9UHB9 627 aaKnown RBP13.19□□□□□ -0.3
PRKCD-205ENST00000478843 TNNT2P45379 298 aaPredicted RBP13.18□□□□□ -0.3
PRKCD-205ENST00000478843 FSTL1Q12841 308 aa13.18□□□□□ -0.3
PRKCD-205ENST00000478843 PIM2Q9P1W9 311 aa13.18□□□□□ -0.3
PRKCD-205ENST00000478843 SCN7AQ01118 1682 aa13.18□□□□□ -0.3
PRKCD-205ENST00000478843 COL11A2P13942 1736 aaPredicted RBP13.17□□□□□ -0.3
PRKCD-205ENST00000478843 CABP4P57796 275 aa13.17□□□□□ -0.3
PRKCD-205ENST00000478843 DALRD3Q5D0E6 543 aaKnown RBP13.17□□□□□ -0.3
PRKCD-205ENST00000478843 AEBP1Q8IUX7 1158 aa13.17□□□□□ -0.3
PRKCD-205ENST00000478843 RNF181Q9P0P0 153 aa13.17□□□□□ -0.3
PRKCD-205ENST00000478843 ANKRD31Q8N7Z5 1873 aa13.16□□□□□ -0.3
PRKCD-205ENST00000478843 KDM2BQ8NHM5 1336 aa13.16□□□□□ -0.3
PRKCD-205ENST00000478843 POLRMTO00411 1230 aaKnown RBP13.16□□□□□ -0.3
PRKCD-205ENST00000478843 PTCD1O75127 700 aaKnown RBP13.16□□□□□ -0.3
PRKCD-205ENST00000478843 CHRNA5P30532 468 aa13.16□□□□□ -0.3
PRKCD-205ENST00000478843 PLEKHO1Q53GL0 409 aaPredicted RBP13.16□□□□□ -0.3
PRKCD-205ENST00000478843 DICER1Q9UPY3 1922 aaKnown RBP13.15□□□□□ -0.3
PRKCD-205ENST00000478843 AMOTQ4VCS5 1084 aa13.15□□□□□ -0.3
PRKCD-205ENST00000478843 C16orf71Q8IYS4 520 aaPredicted RBP13.15□□□□□ -0.3
PRKCD-205ENST00000478843 ZC3H4Q9UPT8 1303 aaKnown RBP13.14□□□□□ -0.31
PRKCD-205ENST00000478843 MTHFSP49914 203 aa13.14□□□□□ -0.31
PRKCD-205ENST00000478843 COL13A1Q5TAT6 717 aaPredicted RBP13.14□□□□□ -0.31
PRKCD-205ENST00000478843 INTS5Q6P9B9 1019 aaKnown RBP13.14□□□□□ -0.31
PRKCD-205ENST00000478843 SOS1Q07889 1333 aaPredicted RBP13.13□□□□□ -0.31
PRKCD-205ENST00000478843 FER1L6Q2WGJ9 1857 aa13.13□□□□□ -0.31
PRKCD-205ENST00000478843 TM4SF1P30408 202 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms