RNA–Protein interactions for RNA: ENST00000478509.1

FAM50A-204, Transcript of family with sequence similarity 50 member A, humanhuman

TSL 3

Gene FAM50A, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM50A-204ENST00000478509 SGIP1Q9BQI5 828 aa20.4■□□□□ 0.86
FAM50A-204ENST00000478509 ATP6V1AP38606 617 aa20.39■□□□□ 0.85
FAM50A-204ENST00000478509 MSL1Q68DK7 614 aa20.39■□□□□ 0.85
FAM50A-204ENST00000478509 KLHL34Q8N239 644 aa20.39■□□□□ 0.85
FAM50A-204ENST00000478509 RBM42Q9BTD8 480 aaKnown RBP20.39■□□□□ 0.85
FAM50A-204ENST00000478509 ITPK1Q13572 414 aa20.38■□□□□ 0.85
FAM50A-204ENST00000478509 AMIGO3Q86WK7 504 aa20.38■□□□□ 0.85
FAM50A-204ENST00000478509 FHDC1Q9C0D6 1143 aaPredicted RBP20.38■□□□□ 0.85
FAM50A-204ENST00000478509 COL5A3P25940 1745 aaPredicted RBP20.37■□□□□ 0.85
FAM50A-204ENST00000478509 PPP2R1AP30153 589 aa20.37■□□□□ 0.85
FAM50A-204ENST00000478509 ARXQ96QS3 562 aa20.37■□□□□ 0.85
FAM50A-204ENST00000478509 MTHFSDQ2M296 383 aaKnown RBP20.36■□□□□ 0.85
FAM50A-204ENST00000478509 AKAP4Q5JQC9 854 aa20.36■□□□□ 0.85
FAM50A-204ENST00000478509 SLC16A10Q8TF71 515 aa20.36■□□□□ 0.85
FAM50A-204ENST00000478509 CFAP53Q96M91 514 aa20.36■□□□□ 0.85
FAM50A-204ENST00000478509 UTRNP46939 3433 aa20.35■□□□□ 0.85
FAM50A-204ENST00000478509 POLD1P28340 1107 aa20.35■□□□□ 0.85
FAM50A-204ENST00000478509 NFATC2IPQ8NCF5 419 aa20.35■□□□□ 0.85
FAM50A-204ENST00000478509 SLC4A9Q96Q91 983 aa20.34■□□□□ 0.85
FAM50A-204ENST00000478509 LGR6Q9HBX8 967 aa20.34■□□□□ 0.85
FAM50A-204ENST00000478509 ZNF831Q5JPB2 1677 aa20.33■□□□□ 0.85
FAM50A-204ENST00000478509 GNPATO15228 680 aa20.33■□□□□ 0.85
FAM50A-204ENST00000478509 PTCD1O75127 700 aaKnown RBP20.33■□□□□ 0.85
FAM50A-204ENST00000478509 SYT17Q9BSW7 474 aa20.33■□□□□ 0.85
FAM50A-204ENST00000478509 TJP1Q07157 1748 aa20.33■□□□□ 0.84
FAM50A-204ENST00000478509 MRC1P22897 1456 aa20.32■□□□□ 0.84
FAM50A-204ENST00000478509 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.32■□□□□ 0.84
FAM50A-204ENST00000478509 ADAMTS7Q9UKP4 1686 aa20.32■□□□□ 0.84
FAM50A-204ENST00000478509 MYH14Q7Z406 1995 aaKnown RBP20.32■□□□□ 0.84
FAM50A-204ENST00000478509 RNMTO43148 476 aaKnown RBP20.31■□□□□ 0.84
FAM50A-204ENST00000478509 HMGB2P26583 209 aaKnown RBP20.3■□□□□ 0.84
FAM50A-204ENST00000478509 PRKAR2BP31323 418 aa20.3■□□□□ 0.84
FAM50A-204ENST00000478509 GOLGB1Q14789 3259 aaKnown RBP20.29■□□□□ 0.84
FAM50A-204ENST00000478509 FLAD1Q8NFF5 587 aa20.29■□□□□ 0.84
FAM50A-204ENST00000478509 SLC52A2Q9HAB3 445 aa20.29■□□□□ 0.84
FAM50A-204ENST00000478509 C4AP0C0L4 1744 aa20.28■□□□□ 0.84
FAM50A-204ENST00000478509 U2AF1L5P0DN76 240 aaPredicted RBP20.28■□□□□ 0.84
FAM50A-204ENST00000478509 U2AF1Q01081 240 aaKnown RBP eCLIP20.28■□□□□ 0.84
FAM50A-204ENST00000478509 SLC39A6Q13433 755 aa20.28■□□□□ 0.84
FAM50A-204ENST00000478509 NUDCQ9Y266 331 aa20.28■□□□□ 0.84
FAM50A-204ENST00000478509 MAP3K5Q99683 1374 aa20.28■□□□□ 0.84
FAM50A-204ENST00000478509 DCAF8L1A6NGE4 600 aa20.27■□□□□ 0.84
FAM50A-204ENST00000478509 SSFA2P28290 1259 aa20.27■□□□□ 0.84
FAM50A-204ENST00000478509 RSPH6AQ9H0K4 717 aa20.27■□□□□ 0.84
FAM50A-204ENST00000478509 DDX10Q13206 875 aaKnown RBP20.26■□□□□ 0.83
FAM50A-204ENST00000478509 GAS2L2Q8NHY3 880 aa20.26■□□□□ 0.83
FAM50A-204ENST00000478509 PHACTR3Q96KR7 559 aa20.26■□□□□ 0.83
FAM50A-204ENST00000478509 SIPA1L3O60292 1781 aaPredicted RBP20.26■□□□□ 0.83
FAM50A-204ENST00000478509 CICQ96RK0 1608 aaPredicted RBP20.25■□□□□ 0.83
FAM50A-204ENST00000478509 KCPQ6ZWJ8 1503 aa20.25■□□□□ 0.83
FAM50A-204ENST00000478509 UBR2Q8IWV8 1755 aa20.25■□□□□ 0.83
FAM50A-204ENST00000478509 NLGN2Q8NFZ4 835 aa20.24■□□□□ 0.83
FAM50A-204ENST00000478509 RTCBQ9Y3I0 505 aaKnown RBP20.24■□□□□ 0.83
FAM50A-204ENST00000478509 CNTNAP4Q9C0A0 1308 aa20.24■□□□□ 0.83
FAM50A-204ENST00000478509 GNAT3A8MTJ3 354 aa20.23■□□□□ 0.83
FAM50A-204ENST00000478509 PELP1Q8IZL8 1130 aaKnown RBP20.23■□□□□ 0.83
FAM50A-204ENST00000478509 DNAJC10Q8IXB1 793 aa20.22■□□□□ 0.83
FAM50A-204ENST00000478509 CRKLP46109 303 aaKnown RBP20.21■□□□□ 0.83
FAM50A-204ENST00000478509 TRAPPC3LQ5T215 181 aa20.21■□□□□ 0.83
FAM50A-204ENST00000478509 IL17REQ8NFR9 667 aa20.21■□□□□ 0.83
FAM50A-204ENST00000478509 DLG5Q8TDM6 1919 aa20.21■□□□□ 0.83
FAM50A-204ENST00000478509 TEFQ10587 303 aa20.2■□□□□ 0.82
FAM50A-204ENST00000478509 RC3H1Q5TC82 1133 aaKnown RBP20.19■□□□□ 0.82
FAM50A-204ENST00000478509 RPS6KA4O75676 772 aa20.18■□□□□ 0.82
FAM50A-204ENST00000478509 YY1P25490 414 aa20.18■□□□□ 0.82
FAM50A-204ENST00000478509 TTC5Q8N0Z6 440 aa20.18■□□□□ 0.82
FAM50A-204ENST00000478509 ARHGEF1Q92888 912 aaKnown RBP20.18■□□□□ 0.82
FAM50A-204ENST00000478509 CHD4Q14839 1912 aa20.17■□□□□ 0.82
FAM50A-204ENST00000478509 RFC4P35249 363 aa20.17■□□□□ 0.82
FAM50A-204ENST00000478509 GPR162Q16538 588 aa20.17■□□□□ 0.82
FAM50A-204ENST00000478509 FCHSD2O94868 740 aa20.16■□□□□ 0.82
FAM50A-204ENST00000478509 MCM10Q7L590 875 aa20.16■□□□□ 0.82
FAM50A-204ENST00000478509 WWC3Q9ULE0 1092 aa20.16■□□□□ 0.82
FAM50A-204ENST00000478509 MMP10P09238 476 aa20.15■□□□□ 0.82
FAM50A-204ENST00000478509 ADRA2BP18089 450 aa20.15■□□□□ 0.82
FAM50A-204ENST00000478509 DCTN1Q14203 1278 aa20.15■□□□□ 0.82
FAM50A-204ENST00000478509 INTS5Q6P9B9 1019 aaKnown RBP20.15■□□□□ 0.82
FAM50A-204ENST00000478509 CCDC87Q9NVE4 849 aa20.15■□□□□ 0.82
FAM50A-204ENST00000478509 SRP68Q9UHB9 627 aaKnown RBP20.15■□□□□ 0.82
FAM50A-204ENST00000478509 CEMIPQ8WUJ3 1361 aa20.15■□□□□ 0.82
FAM50A-204ENST00000478509 RALBP1Q15311 655 aa20.14■□□□□ 0.81
FAM50A-204ENST00000478509 RTF1Q92541 710 aaKnown RBP20.14■□□□□ 0.81
FAM50A-204ENST00000478509 CYP19A1P11511 503 aaPredicted RBP20.13■□□□□ 0.81
FAM50A-204ENST00000478509 GYS1P13807 737 aa20.13■□□□□ 0.81
FAM50A-204ENST00000478509 ZNF496Q96IT1 587 aaPredicted RBP20.13■□□□□ 0.81
FAM50A-204ENST00000478509 ZBTB1Q9Y2K1 713 aa20.13■□□□□ 0.81
FAM50A-204ENST00000478509 BTBD11A6QL63 1104 aa20.12■□□□□ 0.81
FAM50A-204ENST00000478509 KCNQ3O43525 872 aa20.12■□□□□ 0.81
FAM50A-204ENST00000478509 ZNF790Q6PG37 636 aa20.12■□□□□ 0.81
FAM50A-204ENST00000478509 N4BP2Q86UW6 1770 aaPredicted RBP20.11■□□□□ 0.81
FAM50A-204ENST00000478509 SOS1Q07889 1333 aaPredicted RBP20.11■□□□□ 0.81
FAM50A-204ENST00000478509 USP42Q9H9J4 1324 aaKnown RBP20.11■□□□□ 0.81
FAM50A-204ENST00000478509 NEFMP07197 916 aa20.11■□□□□ 0.81
FAM50A-204ENST00000478509 CD2APQ9Y5K6 639 aa20.11■□□□□ 0.81
FAM50A-204ENST00000478509 KIF13BQ9NQT8 1826 aa20.11■□□□□ 0.81
FAM50A-204ENST00000478509 COL15A1P39059 1388 aa20.1■□□□□ 0.81
FAM50A-204ENST00000478509 HEG1Q9ULI3 1381 aa20.1■□□□□ 0.81
FAM50A-204ENST00000478509 MYBBP1AQ9BQG0 1328 aaKnown RBP20.1■□□□□ 0.81
FAM50A-204ENST00000478509 YBX3P16989 372 aaKnown RBP eCLIP20.1■□□□□ 0.81
FAM50A-204ENST00000478509 CANXP27824 592 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms