RNA–Protein interactions for RNA: ENST00000478203.1

GCAT-207, Transcript of glycine C-acetyltransferase, humanhuman

TSL 2

Gene GCAT, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCAT-207ENST00000478203 ATG3Q9NT62 314 aa23.81■■□□□ 1.4
GCAT-207ENST00000478203 PER1O15534 1290 aaPredicted RBP23.8■■□□□ 1.4
GCAT-207ENST00000478203 PHF14O94880 888 aa23.8■■□□□ 1.4
GCAT-207ENST00000478203 GPR162Q16538 588 aa23.8■■□□□ 1.4
GCAT-207ENST00000478203 LINC00116Q8NCU8 138 aa23.79■■□□□ 1.4
GCAT-207ENST00000478203 KDRP35968 1356 aa23.78■■□□□ 1.4
GCAT-207ENST00000478203 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.78■■□□□ 1.4
GCAT-207ENST00000478203 SSFA2P28290 1259 aa23.78■■□□□ 1.4
GCAT-207ENST00000478203 CNGB1Q14028 1251 aaPredicted RBP23.77■■□□□ 1.4
GCAT-207ENST00000478203 PELP1Q8IZL8 1130 aaKnown RBP23.77■■□□□ 1.4
GCAT-207ENST00000478203 RBM42Q9BTD8 480 aaKnown RBP23.77■■□□□ 1.4
GCAT-207ENST00000478203 GNPATO15228 680 aa23.76■■□□□ 1.39
GCAT-207ENST00000478203 ITPK1Q13572 414 aa23.76■■□□□ 1.39
GCAT-207ENST00000478203 DIAPH1O60610 1272 aaKnown RBP23.75■■□□□ 1.39
GCAT-207ENST00000478203 KDM6AO15550 1401 aaPredicted RBP23.75■■□□□ 1.39
GCAT-207ENST00000478203 NPC1L1Q9UHC9 1359 aa23.74■■□□□ 1.39
GCAT-207ENST00000478203 GOLGB1Q14789 3259 aaKnown RBP23.73■■□□□ 1.39
GCAT-207ENST00000478203 UBR3Q6ZT12 1888 aa23.73■■□□□ 1.39
GCAT-207ENST00000478203 HMOX1P09601 288 aa23.72■■□□□ 1.39
GCAT-207ENST00000478203 AKAP4Q5JQC9 854 aa23.72■■□□□ 1.39
GCAT-207ENST00000478203 NLGN2Q8NFZ4 835 aa23.72■■□□□ 1.39
GCAT-207ENST00000478203 AMIGO3Q86WK7 504 aa23.71■■□□□ 1.39
GCAT-207ENST00000478203 NFATC2IPQ8NCF5 419 aa23.71■■□□□ 1.39
GCAT-207ENST00000478203 RTCBQ9Y3I0 505 aaKnown RBP23.71■■□□□ 1.39
GCAT-207ENST00000478203 SMIM5Q71RC9 77 aa23.7■■□□□ 1.38
GCAT-207ENST00000478203 CD2APQ9Y5K6 639 aa23.7■■□□□ 1.38
GCAT-207ENST00000478203 TRAPPC3LQ5T215 181 aa23.69■■□□□ 1.38
GCAT-207ENST00000478203 PTCD1O75127 700 aaKnown RBP23.68■■□□□ 1.38
GCAT-207ENST00000478203 RC3H1Q5TC82 1133 aaKnown RBP23.68■■□□□ 1.38
GCAT-207ENST00000478203 ZNF831Q5JPB2 1677 aa23.67■■□□□ 1.38
GCAT-207ENST00000478203 CHD4Q14839 1912 aa23.67■■□□□ 1.38
GCAT-207ENST00000478203 SLC4A9Q96Q91 983 aa23.67■■□□□ 1.38
GCAT-207ENST00000478203 U2SURPO15042 1029 aaKnown RBP23.66■■□□□ 1.38
GCAT-207ENST00000478203 GRIN3BO60391 1043 aa23.66■■□□□ 1.38
GCAT-207ENST00000478203 CNTNAP4Q9C0A0 1308 aa23.65■■□□□ 1.38
GCAT-207ENST00000478203 ADRA2BP18089 450 aa23.65■■□□□ 1.38
GCAT-207ENST00000478203 CFAP53Q96M91 514 aa23.65■■□□□ 1.38
GCAT-207ENST00000478203 SLC52A2Q9HAB3 445 aa23.64■■□□□ 1.37
GCAT-207ENST00000478203 SCN11AQ9UI33 1791 aa23.64■■□□□ 1.37
GCAT-207ENST00000478203 RFC4P35249 363 aa23.63■■□□□ 1.37
GCAT-207ENST00000478203 RNMTO43148 476 aaKnown RBP23.62■■□□□ 1.37
GCAT-207ENST00000478203 RPS6KA4O75676 772 aa23.62■■□□□ 1.37
GCAT-207ENST00000478203 MTHFSDQ2M296 383 aaKnown RBP23.62■■□□□ 1.37
GCAT-207ENST00000478203 ZNF784Q8NCA9 323 aaPredicted RBP23.62■■□□□ 1.37
GCAT-207ENST00000478203 LGR6Q9HBX8 967 aa23.62■■□□□ 1.37
GCAT-207ENST00000478203 NLGN1Q8N2Q7 840 aa23.61■■□□□ 1.37
GCAT-207ENST00000478203 COL5A3P25940 1745 aaPredicted RBP23.61■■□□□ 1.37
GCAT-207ENST00000478203 MMP10P09238 476 aa23.6■■□□□ 1.37
GCAT-207ENST00000478203 ARHGEF1Q92888 912 aaKnown RBP23.6■■□□□ 1.37
GCAT-207ENST00000478203 YBX3P16989 372 aaKnown RBP eCLIP23.59■■□□□ 1.371e-7■■■■□ 19.5
GCAT-207ENST00000478203 CRKLP46109 303 aaKnown RBP23.59■■□□□ 1.37
GCAT-207ENST00000478203 COL3A1P02461 1466 aaPredicted RBP23.58■■□□□ 1.37
GCAT-207ENST00000478203 GAS2L2Q8NHY3 880 aa23.58■■□□□ 1.37
GCAT-207ENST00000478203 NUDCQ9Y266 331 aa23.58■■□□□ 1.37
GCAT-207ENST00000478203 MRC1P22897 1456 aa23.56■■□□□ 1.36
GCAT-207ENST00000478203 GNAT3A8MTJ3 354 aa23.54■■□□□ 1.36
GCAT-207ENST00000478203 GYS1P13807 737 aa23.54■■□□□ 1.36
GCAT-207ENST00000478203 TEFQ10587 303 aa23.54■■□□□ 1.36
GCAT-207ENST00000478203 SLC39A6Q13433 755 aa23.54■■□□□ 1.36
GCAT-207ENST00000478203 TTC5Q8N0Z6 440 aa23.54■■□□□ 1.36
GCAT-207ENST00000478203 PARP3Q9Y6F1 533 aa23.54■■□□□ 1.36
GCAT-207ENST00000478203 DNAJC10Q8IXB1 793 aa23.53■■□□□ 1.36
GCAT-207ENST00000478203 CCDC87Q9NVE4 849 aa23.53■■□□□ 1.36
GCAT-207ENST00000478203 MYH14Q7Z406 1995 aaKnown RBP23.52■■□□□ 1.36
GCAT-207ENST00000478203 VIRMAQ69YN4 1812 aaKnown RBP23.52■■□□□ 1.36
GCAT-207ENST00000478203 TJP1Q07157 1748 aa23.52■■□□□ 1.36
GCAT-207ENST00000478203 PPP2R1AP30153 589 aa23.51■■□□□ 1.35
GCAT-207ENST00000478203 CICQ96RK0 1608 aaPredicted RBP23.51■■□□□ 1.35
GCAT-207ENST00000478203 ZPR1O75312 459 aa23.5■■□□□ 1.35
GCAT-207ENST00000478203 PRKAR2BP31323 418 aa23.5■■□□□ 1.35
GCAT-207ENST00000478203 INTS5Q6P9B9 1019 aaKnown RBP23.5■■□□□ 1.35
GCAT-207ENST00000478203 VSIG10Q8N0Z9 540 aa23.5■■□□□ 1.35
GCAT-207ENST00000478203 WWC3Q9ULE0 1092 aa23.5■■□□□ 1.35
GCAT-207ENST00000478203 ADAMTS7Q9UKP4 1686 aa23.49■■□□□ 1.35
GCAT-207ENST00000478203 U2AF1L5P0DN76 240 aaPredicted RBP23.49■■□□□ 1.35
GCAT-207ENST00000478203 TGFB2P61812 414 aa23.49■■□□□ 1.35
GCAT-207ENST00000478203 U2AF1Q01081 240 aaKnown RBP eCLIP23.49■■□□□ 1.35
GCAT-207ENST00000478203 USP42Q9H9J4 1324 aaKnown RBP23.49■■□□□ 1.35
GCAT-207ENST00000478203 C4AP0C0L4 1744 aa23.48■■□□□ 1.35
GCAT-207ENST00000478203 SRP68Q9UHB9 627 aaKnown RBP23.48■■□□□ 1.35
GCAT-207ENST00000478203 ZNF316A6NFI3 1004 aaPredicted RBP23.47■■□□□ 1.35
GCAT-207ENST00000478203 CYP19A1P11511 503 aaPredicted RBP23.47■■□□□ 1.35
GCAT-207ENST00000478203 RSPH6AQ9H0K4 717 aa23.47■■□□□ 1.35
GCAT-207ENST00000478203 KCPQ6ZWJ8 1503 aa23.47■■□□□ 1.35
GCAT-207ENST00000478203 STARD3NLO95772 234 aa23.46■■□□□ 1.35
GCAT-207ENST00000478203 IL17REQ8NFR9 667 aa23.46■■□□□ 1.35
GCAT-207ENST00000478203 SOS1Q07889 1333 aaPredicted RBP23.45■■□□□ 1.34
GCAT-207ENST00000478203 FKBP8Q14318 412 aa23.45■■□□□ 1.34
GCAT-207ENST00000478203 C10orf71Q711Q0 1435 aa23.44■■□□□ 1.34
GCAT-207ENST00000478203 FCHSD2O94868 740 aa23.44■■□□□ 1.34
GCAT-207ENST00000478203 ZNF790Q6PG37 636 aa23.44■■□□□ 1.34
GCAT-207ENST00000478203 RTF1Q92541 710 aaKnown RBP23.44■■□□□ 1.34
GCAT-207ENST00000478203 PHACTR3Q96KR7 559 aa23.44■■□□□ 1.34
GCAT-207ENST00000478203 TEX13AQ9BXU3 409 aaPredicted RBP23.43■■□□□ 1.34
GCAT-207ENST00000478203 ZBTB1Q9Y2K1 713 aa23.43■■□□□ 1.34
GCAT-207ENST00000478203 PXDNLA1KZ92 1463 aa23.43■■□□□ 1.34
GCAT-207ENST00000478203 KIF13BQ9NQT8 1826 aa23.43■■□□□ 1.34
GCAT-207ENST00000478203 COL15A1P39059 1388 aa23.42■■□□□ 1.34
GCAT-207ENST00000478203 A0A0G2JLW4 131 aa23.42■■□□□ 1.34
GCAT-207ENST00000478203 GIGYF1O75420 1035 aaPredicted RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms