RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 MYT1Q01538 1121 aa15.29■□□□□ 0.04
CBWD3-206ENST00000478048 SEPT12Q8IYM1 358 aa15.29■□□□□ 0.04
CBWD3-206ENST00000478048 RAPGEF4Q8WZA2 1011 aa15.29■□□□□ 0.04
CBWD3-206ENST00000478048 RGS12O14924 1447 aa15.28■□□□□ 0.04
CBWD3-206ENST00000478048 TATP17735 454 aaPredicted RBP15.28■□□□□ 0.04
CBWD3-206ENST00000478048 RSPH6AQ9H0K4 717 aa15.28■□□□□ 0.04
CBWD3-206ENST00000478048 CCER2I3L3R5 266 aa15.27■□□□□ 0.04
CBWD3-206ENST00000478048 PLCG2P16885 1265 aa15.27■□□□□ 0.04
CBWD3-206ENST00000478048 POTEGQ6S5H5 508 aa15.27■□□□□ 0.04
CBWD3-206ENST00000478048 PNISRQ8TF01 805 aaKnown RBP15.27■□□□□ 0.04
CBWD3-206ENST00000478048 ADAMTS8Q9UP79 889 aa15.27■□□□□ 0.04
CBWD3-206ENST00000478048 OVOS2A0A0G2JMS6 1433 aa15.27■□□□□ 0.04
CBWD3-206ENST00000478048 PARP4Q9UKK3 1724 aaKnown RBP15.27■□□□□ 0.03
CBWD3-206ENST00000478048 BRWD3Q6RI45 1802 aa15.27■□□□□ 0.03
CBWD3-206ENST00000478048 LRRC37A3O60309 1634 aa15.26■□□□□ 0.03
CBWD3-206ENST00000478048 WDR43Q15061 677 aaKnown RBP eCLIP15.26■□□□□ 0.03
CBWD3-206ENST00000478048 CDCA7Q9BWT1 371 aaPredicted RBP15.26■□□□□ 0.03
CBWD3-206ENST00000478048 PRKAR2BP31323 418 aa15.26■□□□□ 0.03
CBWD3-206ENST00000478048 ZNF467Q7Z7K2 595 aaPredicted RBP15.26■□□□□ 0.03
CBWD3-206ENST00000478048 PCDHB8Q9UN66 801 aa15.26■□□□□ 0.03
CBWD3-206ENST00000478048 EXOC5O00471 708 aa15.25■□□□□ 0.03
CBWD3-206ENST00000478048 FCHSD2O94868 740 aa15.25■□□□□ 0.03
CBWD3-206ENST00000478048 DDB1Q16531 1140 aa15.25■□□□□ 0.03
CBWD3-206ENST00000478048 SHANK3Q9BYB0 1731 aa15.24■□□□□ 0.03
CBWD3-206ENST00000478048 PHACTR3Q96KR7 559 aa15.24■□□□□ 0.03
CBWD3-206ENST00000478048 CHRM1P11229 460 aaPredicted RBP15.23■□□□□ 0.03
CBWD3-206ENST00000478048 FAM182BQ5T319 152 aa15.23■□□□□ 0.03
CBWD3-206ENST00000478048 ZCRB1Q8TBF4 217 aaKnown RBP15.23■□□□□ 0.03
CBWD3-206ENST00000478048 PLEKHF1Q96S99 279 aa15.23■□□□□ 0.03
CBWD3-206ENST00000478048 PKD1L3Q7Z443 1732 aa15.23■□□□□ 0.03
CBWD3-206ENST00000478048 TNS2Q63HR2 1409 aa15.23■□□□□ 0.03
CBWD3-206ENST00000478048 IRX5P78411 483 aaPredicted RBP15.23■□□□□ 0.03
CBWD3-206ENST00000478048 CCDC146Q8IYE0 955 aa15.23■□□□□ 0.03
CBWD3-206ENST00000478048 FAM9BQ8IZU0 186 aa15.23■□□□□ 0.03
CBWD3-206ENST00000478048 DDX54Q8TDD1 881 aaKnown RBP15.22■□□□□ 0.03
CBWD3-206ENST00000478048 CYP27B1O15528 508 aa15.21■□□□□ 0.03
CBWD3-206ENST00000478048 PDE3BQ13370 1112 aa15.21■□□□□ 0.03
CBWD3-206ENST00000478048 MTHFSDQ2M296 383 aaKnown RBP15.21■□□□□ 0.03
CBWD3-206ENST00000478048 PLEKHO1Q53GL0 409 aaPredicted RBP15.21■□□□□ 0.03
CBWD3-206ENST00000478048 KRT27Q7Z3Y8 459 aa15.21■□□□□ 0.03
CBWD3-206ENST00000478048 MARCH10Q8NA82 808 aaPredicted RBP15.21■□□□□ 0.03
CBWD3-206ENST00000478048 FAM163AQ96GL9 167 aaPredicted RBP15.2■□□□□ 0.02
CBWD3-206ENST00000478048 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.2■□□□□ 0.02
CBWD3-206ENST00000478048 SPG7Q9UQ90 795 aa15.2■□□□□ 0.02
CBWD3-206ENST00000478048 AMOTQ4VCS5 1084 aa15.2■□□□□ 0.02
CBWD3-206ENST00000478048 OCEL1Q9H607 264 aa15.2■□□□□ 0.02
CBWD3-206ENST00000478048 ZNF530Q6P9A1 599 aaPredicted RBP15.19■□□□□ 0.02
CBWD3-206ENST00000478048 ILDR2Q71H61 639 aa15.19■□□□□ 0.02
CBWD3-206ENST00000478048 PLSCR2Q9NRY7 297 aa15.19■□□□□ 0.02
CBWD3-206ENST00000478048 PCDH11XQ9BZA7 1347 aa15.18■□□□□ 0.02
CBWD3-206ENST00000478048 PCDH11YQ9BZA8 1340 aa15.18■□□□□ 0.02
CBWD3-206ENST00000478048 SENP3-EIF4A1A0A087X0R7 540 aa15.18■□□□□ 0.02
CBWD3-206ENST00000478048 PCDH10Q9P2E7 1040 aa15.18■□□□□ 0.02
CBWD3-206ENST00000478048 PLEKHG2Q9H7P9 1386 aa15.18■□□□□ 0.02
CBWD3-206ENST00000478048 KAT6BQ8WYB5 2073 aa15.18■□□□□ 0.02
CBWD3-206ENST00000478048 EP400Q96L91 3159 aa15.18■□□□□ 0.02
CBWD3-206ENST00000478048 PHKG2P15735 406 aa15.17■□□□□ 0.02
CBWD3-206ENST00000478048 SPOCK2Q92563 424 aa15.17■□□□□ 0.02
CBWD3-206ENST00000478048 RUNDC1Q96C34 613 aa15.17■□□□□ 0.02
CBWD3-206ENST00000478048 PNNQ9H307 717 aaKnown RBP15.17■□□□□ 0.02
CBWD3-206ENST00000478048 IFNL2Q8IZJ0 200 aa15.17■□□□□ 0.02
CBWD3-206ENST00000478048 MAPK8IP3Q9UPT6 1336 aa15.16■□□□□ 0.02
CBWD3-206ENST00000478048 GAS2L2Q8NHY3 880 aa15.16■□□□□ 0.02
CBWD3-206ENST00000478048 NEFMP07197 916 aa15.15■□□□□ 0.02
CBWD3-206ENST00000478048 RRP7AQ9Y3A4 280 aaKnown RBP15.15■□□□□ 0.02
CBWD3-206ENST00000478048 DLG5Q8TDM6 1919 aa15.15■□□□□ 0.02
CBWD3-206ENST00000478048 AKAP4Q5JQC9 854 aa15.14■□□□□ 0.01
CBWD3-206ENST00000478048 C1orf141Q5JVX7 400 aa15.14■□□□□ 0.01
CBWD3-206ENST00000478048 IFNLR1Q8IU57 520 aaPredicted RBP15.14■□□□□ 0.01
CBWD3-206ENST00000478048 APAF1O14727 1248 aa15.14■□□□□ 0.01
CBWD3-206ENST00000478048 TMPOP42166 694 aaKnown RBP15.14■□□□□ 0.01
CBWD3-206ENST00000478048 NFE2L2Q16236 605 aa15.14■□□□□ 0.01
CBWD3-206ENST00000478048 MPRIPQ6WCQ1 1025 aa15.14■□□□□ 0.01
CBWD3-206ENST00000478048 NKX1-1Q15270 411 aaPredicted RBP15.13■□□□□ 0.01
CBWD3-206ENST00000478048 NEUROD2Q15784 382 aa15.13■□□□□ 0.01
CBWD3-206ENST00000478048 LCE2DQ5TA82 110 aaPredicted RBP15.13■□□□□ 0.01
CBWD3-206ENST00000478048 ACSBG1Q96GR2 724 aa15.13■□□□□ 0.01
CBWD3-206ENST00000478048 VIRMAQ69YN4 1812 aaKnown RBP15.12■□□□□ 0.01
CBWD3-206ENST00000478048 KDM6AO15550 1401 aaPredicted RBP15.12■□□□□ 0.01
CBWD3-206ENST00000478048 LGR6Q9HBX8 967 aa15.12■□□□□ 0.01
CBWD3-206ENST00000478048 TOGARAM1Q9Y4F4 1720 aa15.12■□□□□ 0.01
CBWD3-206ENST00000478048 SBF2Q86WG5 1849 aa15.12■□□□□ 0.01
CBWD3-206ENST00000478048 MAP3K5Q99683 1374 aa15.12■□□□□ 0.01
CBWD3-206ENST00000478048 GNAT3A8MTJ3 354 aa15.12■□□□□ 0.01
CBWD3-206ENST00000478048 RIPK4P57078 832 aa15.12■□□□□ 0.01
CBWD3-206ENST00000478048 FAM196AQ6ZSG2 479 aa15.12■□□□□ 0.01
CBWD3-206ENST00000478048 PTF1AQ7RTS3 328 aa15.12■□□□□ 0.01
CBWD3-206ENST00000478048 SLAIN1Q8ND83 568 aa15.12■□□□□ 0.01
CBWD3-206ENST00000478048 DOT1LQ8TEK3 1739 aa15.11■□□□□ 0.01
CBWD3-206ENST00000478048 KCNQ2O43526 872 aa15.11■□□□□ 0.01
CBWD3-206ENST00000478048 GOLGA2Q08379 1002 aa15.11■□□□□ 0.01
CBWD3-206ENST00000478048 DCTN1Q14203 1278 aa15.11■□□□□ 0.01
CBWD3-206ENST00000478048 IL17REQ8NFR9 667 aa15.11■□□□□ 0.01
CBWD3-206ENST00000478048 BCL9O00512 1426 aa15.1■□□□□ 0.01
CBWD3-206ENST00000478048 MCM10Q7L590 875 aa15.1■□□□□ 0.01
CBWD3-206ENST00000478048 DCAF5Q96JK2 942 aa15.1■□□□□ 0.01
CBWD3-206ENST00000478048 SCN11AQ9UI33 1791 aa15.1■□□□□ 0.01
CBWD3-206ENST00000478048 RNMTO43148 476 aaKnown RBP15.09■□□□□ 0.01
CBWD3-206ENST00000478048 HSP90AB1P08238 724 aaKnown RBP15.09■□□□□ 0.01
CBWD3-206ENST00000478048 PRIM1P49642 420 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms