RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 XAGE2Q96GT9 111 aa5.29□□□□□ -1.56
FNDC3B-209ENST00000478016 ETNK1Q9HBU6 452 aa5.29□□□□□ -1.56
FNDC3B-209ENST00000478016 RBM19Q9Y4C8 960 aaKnown RBP5.29□□□□□ -1.56
FNDC3B-209ENST00000478016 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.28□□□□□ -1.56
FNDC3B-209ENST00000478016 ZBTB7BO15156 539 aaPredicted RBP5.28□□□□□ -1.56
FNDC3B-209ENST00000478016 MAN1A2O60476 641 aa5.28□□□□□ -1.56
FNDC3B-209ENST00000478016 INHAP05111 366 aa5.28□□□□□ -1.56
FNDC3B-209ENST00000478016 RNF144AP50876 292 aaPredicted RBP5.28□□□□□ -1.56
FNDC3B-209ENST00000478016 CRTC2Q53ET0 693 aaPredicted RBP5.28□□□□□ -1.56
FNDC3B-209ENST00000478016 TAF7LQ5H9L4 462 aa5.28□□□□□ -1.56
FNDC3B-209ENST00000478016 SIX5Q8N196 739 aa5.28□□□□□ -1.56
FNDC3B-209ENST00000478016 ZNF594Q96JF6 807 aaPredicted RBP5.28□□□□□ -1.56
FNDC3B-209ENST00000478016 KIAA1024Q9UPX6 916 aa5.28□□□□□ -1.56
FNDC3B-209ENST00000478016 POTECB2RU33 542 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 TMEM229AB2RXF0 380 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 USP17L15C9J2P7 530 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 USP17L10C9JJH3 530 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 USP17L13C9JLJ4 530 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 USP17L12C9JPN9 530 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 USP17L11C9JVI0 530 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 USP17L21D6R901 530 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 USP17L18D6R9N7 530 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 USP17L22D6RA61 530 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 USP17L17D6RBQ6 530 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 USP17L19D6RCP7 530 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 USP17L20D6RJB6 530 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 BACH1O14867 736 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 STAU1O95793 577 aaKnown RBP5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 SRPK2P78362 688 aaKnown RBP5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 USP17L24Q0WX57 530 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 PTK7Q13308 1070 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 CDCA8Q53HL2 280 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 SLC27A3Q5K4L6 730 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 FOXD4L5Q5VV16 416 aaPredicted RBP5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 ZNF787Q6DD87 383 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 RNF217Q8TC41 542 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 ARID3AQ99856 593 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 HRH3Q9Y5N1 445 aa5.27□□□□□ -1.57
FNDC3B-209ENST00000478016 IGSF3O75054 1194 aa5.26□□□□□ -1.57
FNDC3B-209ENST00000478016 PPP1R15AO75807 674 aaPredicted RBP5.26□□□□□ -1.57
FNDC3B-209ENST00000478016 SNRPBP14678 240 aaKnown RBP5.26□□□□□ -1.57
FNDC3B-209ENST00000478016 GTF2E1P29083 439 aaPredicted RBP5.26□□□□□ -1.57
FNDC3B-209ENST00000478016 CENPCQ03188 943 aa5.26□□□□□ -1.57
FNDC3B-209ENST00000478016 PDE4CQ08493 712 aa5.26□□□□□ -1.57
FNDC3B-209ENST00000478016 TLR1Q15399 786 aa5.26□□□□□ -1.57
FNDC3B-209ENST00000478016 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.26□□□□□ -1.575e-14■□□□□ 9
FNDC3B-209ENST00000478016 ANKMY2Q8IV38 441 aa5.26□□□□□ -1.57
FNDC3B-209ENST00000478016 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.26□□□□□ -1.57
FNDC3B-209ENST00000478016 SLC4A9Q96Q91 983 aa5.26□□□□□ -1.57
FNDC3B-209ENST00000478016 ZNF358Q9NW07 568 aa5.26□□□□□ -1.57
FNDC3B-209ENST00000478016 SERTAD1Q9UHV2 236 aa5.26□□□□□ -1.57
FNDC3B-209ENST00000478016 DNMT3LQ9UJW3 386 aa5.26□□□□□ -1.57
FNDC3B-209ENST00000478016 FIGNL2A6NMB9 653 aa5.25□□□□□ -1.57
FNDC3B-209ENST00000478016 M0R2N6 131 aa5.25□□□□□ -1.57
FNDC3B-209ENST00000478016 DKK1O94907 266 aa5.25□□□□□ -1.57
FNDC3B-209ENST00000478016 ATG7O95352 703 aa5.25□□□□□ -1.57
FNDC3B-209ENST00000478016 SMTNP53814 917 aa5.25□□□□□ -1.57
FNDC3B-209ENST00000478016 SEC13P55735 322 aa5.25□□□□□ -1.57
FNDC3B-209ENST00000478016 DPYDQ12882 1025 aa5.25□□□□□ -1.57
FNDC3B-209ENST00000478016 LYSMD3Q7Z3D4 306 aa5.25□□□□□ -1.57
FNDC3B-209ENST00000478016 ZSCAN10Q96SZ4 725 aaPredicted RBP5.25□□□□□ -1.57
FNDC3B-209ENST00000478016 FHDC1Q9C0D6 1143 aaPredicted RBP5.25□□□□□ -1.57
FNDC3B-209ENST00000478016 GRIP2Q9C0E4 1043 aa5.25□□□□□ -1.57
FNDC3B-209ENST00000478016 A6NJY4 79 aa5.24□□□□□ -1.57
FNDC3B-209ENST00000478016 SOBPA7XYQ1 873 aa5.24□□□□□ -1.57
FNDC3B-209ENST00000478016 SFI1A8K8P3 1242 aa5.24□□□□□ -1.57
FNDC3B-209ENST00000478016 NEFLP07196 543 aa5.24□□□□□ -1.57
FNDC3B-209ENST00000478016 ELOAQ14241 798 aaKnown RBP5.24□□□□□ -1.57
FNDC3B-209ENST00000478016 GNASQ5JWF2 1037 aa5.24□□□□□ -1.57
FNDC3B-209ENST00000478016 TMEM214Q6NUQ4 689 aaKnown RBP5.24□□□□□ -1.57
FNDC3B-209ENST00000478016 PRICKLE2Q7Z3G6 844 aa5.24□□□□□ -1.57
FNDC3B-209ENST00000478016 NBPF15Q8N660 670 aa5.24□□□□□ -1.57
FNDC3B-209ENST00000478016 NOVA2Q9UNW9 492 aaKnown RBP5.24□□□□□ -1.57
FNDC3B-209ENST00000478016 SPATA31C2B4DYI2 1134 aa5.23□□□□□ -1.57
FNDC3B-209ENST00000478016 CDK2AP1O14519 115 aa5.23□□□□□ -1.57
FNDC3B-209ENST00000478016 MTFR1Q15390 333 aa5.23□□□□□ -1.57
FNDC3B-209ENST00000478016 WDR44Q5JSH3 913 aa5.23□□□□□ -1.57
FNDC3B-209ENST00000478016 TAS1R3Q7RTX0 852 aa5.23□□□□□ -1.57
FNDC3B-209ENST00000478016 PPARGC1BQ86YN6 1023 aaKnown RBP5.23□□□□□ -1.57
FNDC3B-209ENST00000478016 FAM200AQ8TCP9 573 aa5.23□□□□□ -1.57
FNDC3B-209ENST00000478016 SCHIP1Q9P0W5 487 aaPredicted RBP5.23□□□□□ -1.57
FNDC3B-209ENST00000478016 EPHA4P54764 986 aa5.22□□□□□ -1.57
FNDC3B-209ENST00000478016 POU4F2Q12837 409 aa5.22□□□□□ -1.57
FNDC3B-209ENST00000478016 NBPF10Q6P3W6 841 aaKnown RBP5.22□□□□□ -1.57
FNDC3B-209ENST00000478016 TNS4Q8IZW8 715 aa5.22□□□□□ -1.57
FNDC3B-209ENST00000478016 TSEN2Q8NCE0 465 aaKnown RBP5.22□□□□□ -1.57
FNDC3B-209ENST00000478016 RHBDD1Q8TEB9 315 aa5.22□□□□□ -1.57
FNDC3B-209ENST00000478016 NIFKQ9BYG3 293 aaKnown RBP5.22□□□□□ -1.57
FNDC3B-209ENST00000478016 ACIN1Q9UKV3 1341 aaKnown RBP5.22□□□□□ -1.57
FNDC3B-209ENST00000478016 RHOQP17081 205 aa5.21□□□□□ -1.58
FNDC3B-209ENST00000478016 FOXK2Q01167 660 aa5.21□□□□□ -1.58
FNDC3B-209ENST00000478016 PTSQ03393 145 aa5.21□□□□□ -1.58
FNDC3B-209ENST00000478016 SLC9A9Q8IVB4 645 aa5.21□□□□□ -1.58
FNDC3B-209ENST00000478016 STK32AQ8WU08 396 aa5.21□□□□□ -1.58
FNDC3B-209ENST00000478016 HINFPQ9BQA5 517 aa5.21□□□□□ -1.58
FNDC3B-209ENST00000478016 ZMIZ1Q9ULJ6 1067 aa5.21□□□□□ -1.58
FNDC3B-209ENST00000478016 IQSEC3Q9UPP2 1182 aaPredicted RBP5.21□□□□□ -1.58
FNDC3B-209ENST00000478016 SWI5Q1ZZU3 235 aa5.2□□□□□ -1.58
FNDC3B-209ENST00000478016 C4orf17Q53FE4 359 aa5.2□□□□□ -1.58
FNDC3B-209ENST00000478016 TSPAN10Q9H1Z9 355 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms