RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 SYT17Q9BSW7 474 aa7.74□□□□□ -1.17
TRA2B-211ENST00000477939 NSD3Q9BZ95 1437 aa7.74□□□□□ -1.17
TRA2B-211ENST00000477939 PNPLA7Q6ZV29 1317 aa7.74□□□□□ -1.17
TRA2B-211ENST00000477939 CHD4Q14839 1912 aa7.74□□□□□ -1.17
TRA2B-211ENST00000477939 TAF1LQ8IZX4 1826 aa7.73□□□□□ -1.17
TRA2B-211ENST00000477939 INSRP06213 1382 aa7.73□□□□□ -1.17
TRA2B-211ENST00000477939 FLT4P35916 1363 aa7.73□□□□□ -1.17
TRA2B-211ENST00000477939 KIF24Q5T7B8 1368 aa7.73□□□□□ -1.17
TRA2B-211ENST00000477939 MAP3K5Q99683 1374 aa7.73□□□□□ -1.17
TRA2B-211ENST00000477939 NCAPD2Q15021 1401 aa7.73□□□□□ -1.17
TRA2B-211ENST00000477939 PRIM1P49642 420 aaKnown RBP7.73□□□□□ -1.17
TRA2B-211ENST00000477939 HSP90AB2PQ58FF8 381 aa7.73□□□□□ -1.17
TRA2B-211ENST00000477939 SLC27A3Q5K4L6 730 aa7.73□□□□□ -1.17
TRA2B-211ENST00000477939 ZCRB1Q8TBF4 217 aaKnown RBP7.73□□□□□ -1.17
TRA2B-211ENST00000477939 SYTL4Q96C24 671 aaPredicted RBP7.73□□□□□ -1.17
TRA2B-211ENST00000477939 CARD14Q9BXL6 1004 aa7.73□□□□□ -1.17
TRA2B-211ENST00000477939 SUPT16HQ9Y5B9 1047 aaKnown RBP7.73□□□□□ -1.17
TRA2B-211ENST00000477939 ITGB4P16144 1822 aa7.73□□□□□ -1.17
TRA2B-211ENST00000477939 ZFP91Q96JP5 570 aaPredicted RBP7.72□□□□□ -1.17
TRA2B-211ENST00000477939 CGNL1Q0VF96 1302 aa7.72□□□□□ -1.17
TRA2B-211ENST00000477939 MAP2P11137 1827 aaKnown RBP7.71□□□□□ -1.17
TRA2B-211ENST00000477939 DCAF8L1A6NGE4 600 aa7.71□□□□□ -1.18
TRA2B-211ENST00000477939 CLGNO14967 610 aa7.71□□□□□ -1.18
TRA2B-211ENST00000477939 CALD1Q05682 793 aaKnown RBP7.71□□□□□ -1.18
TRA2B-211ENST00000477939 CDCA8Q53HL2 280 aa7.71□□□□□ -1.18
TRA2B-211ENST00000477939 BBXQ8WY36 941 aaPredicted RBP7.71□□□□□ -1.18
TRA2B-211ENST00000477939 RAPGEF4Q8WZA2 1011 aa7.71□□□□□ -1.18
TRA2B-211ENST00000477939 EMILIN1Q9Y6C2 1016 aa7.71□□□□□ -1.18
TRA2B-211ENST00000477939 PCDH11XQ9BZA7 1347 aa7.71□□□□□ -1.18
TRA2B-211ENST00000477939 PCDH11YQ9BZA8 1340 aa7.71□□□□□ -1.18
TRA2B-211ENST00000477939 C4BP0C0L5 1744 aa7.7□□□□□ -1.18
TRA2B-211ENST00000477939 IGSF3O75054 1194 aa7.7□□□□□ -1.18
TRA2B-211ENST00000477939 ANP32AP39687 249 aaKnown RBP7.7□□□□□ -1.18
TRA2B-211ENST00000477939 GRIPAP1Q4V328 841 aa7.7□□□□□ -1.18
TRA2B-211ENST00000477939 TFCP2L1Q9NZI6 479 aa7.7□□□□□ -1.18
TRA2B-211ENST00000477939 CCNL1Q9UK58 526 aaPredicted RBP7.7□□□□□ -1.18
TRA2B-211ENST00000477939 RBM19Q9Y4C8 960 aaKnown RBP7.7□□□□□ -1.18
TRA2B-211ENST00000477939 PALLDQ8WX93 1383 aa7.7□□□□□ -1.18
TRA2B-211ENST00000477939 UBR3Q6ZT12 1888 aa7.69□□□□□ -1.18
TRA2B-211ENST00000477939 PPM1GO15355 546 aaPredicted RBP7.69□□□□□ -1.18
TRA2B-211ENST00000477939 CYP27B1O15528 508 aa7.69□□□□□ -1.18
TRA2B-211ENST00000477939 TATP17735 454 aaPredicted RBP7.69□□□□□ -1.18
TRA2B-211ENST00000477939 HSP90AA2PQ14568 343 aaPredicted RBP7.69□□□□□ -1.18
TRA2B-211ENST00000477939 AXDND1Q5T1B0 1012 aaPredicted RBP7.69□□□□□ -1.18
TRA2B-211ENST00000477939 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.69□□□□□ -1.18
TRA2B-211ENST00000477939 SLC16A10Q8TF71 515 aa7.69□□□□□ -1.18
TRA2B-211ENST00000477939 ZNF784Q8NCA9 323 aaPredicted RBP7.68□□□□□ -1.18
TRA2B-211ENST00000477939 ZNF592Q92610 1267 aa7.68□□□□□ -1.18
TRA2B-211ENST00000477939 CEP350Q5VT06 3117 aa7.68□□□□□ -1.18
TRA2B-211ENST00000477939 POLD1P28340 1107 aa7.67□□□□□ -1.18
TRA2B-211ENST00000477939 CC2D2BQ6DHV5 1058 aa7.67□□□□□ -1.18
TRA2B-211ENST00000477939 AMIGO3Q86WK7 504 aa7.67□□□□□ -1.18
TRA2B-211ENST00000477939 COL23A1Q86Y22 540 aaPredicted RBP7.67□□□□□ -1.18
TRA2B-211ENST00000477939 NLGN2Q8NFZ4 835 aa7.67□□□□□ -1.18
TRA2B-211ENST00000477939 WASHC2AQ641Q2 1341 aa7.67□□□□□ -1.18
TRA2B-211ENST00000477939 MSL1Q68DK7 614 aa7.66□□□□□ -1.18
TRA2B-211ENST00000477939 MPRIPQ6WCQ1 1025 aa7.66□□□□□ -1.18
TRA2B-211ENST00000477939 ZNF622Q969S3 477 aaKnown RBP eCLIP7.66□□□□□ -1.18
TRA2B-211ENST00000477939 EYA1Q99502 592 aa7.66□□□□□ -1.18
TRA2B-211ENST00000477939 RNF216Q9NWF9 866 aaPredicted RBP7.66□□□□□ -1.18
TRA2B-211ENST00000477939 POLKQ9UBT6 870 aa7.66□□□□□ -1.18
TRA2B-211ENST00000477939 NKX1-1Q15270 411 aaPredicted RBP7.65□□□□□ -1.18
TRA2B-211ENST00000477939 CNPY4Q8N129 248 aa7.65□□□□□ -1.18
TRA2B-211ENST00000477939 PIGBQ92521 554 aa7.65□□□□□ -1.18
TRA2B-211ENST00000477939 COL5A3P25940 1745 aaPredicted RBP7.64□□□□□ -1.19
TRA2B-211ENST00000477939 KDRP35968 1356 aa7.64□□□□□ -1.19
TRA2B-211ENST00000477939 PLEKHG2Q9H7P9 1386 aa7.64□□□□□ -1.19
TRA2B-211ENST00000477939 IGSF1Q8N6C5 1336 aa7.64□□□□□ -1.19
TRA2B-211ENST00000477939 MSH5O43196 834 aa7.64□□□□□ -1.19
TRA2B-211ENST00000477939 PHF14O94880 888 aa7.64□□□□□ -1.19
TRA2B-211ENST00000477939 YBX3P16989 372 aaKnown RBP eCLIP7.64□□□□□ -1.19
TRA2B-211ENST00000477939 TNNT2P45379 298 aaPredicted RBP7.64□□□□□ -1.19
TRA2B-211ENST00000477939 EIF4A2Q14240 407 aaKnown RBP7.64□□□□□ -1.19
TRA2B-211ENST00000477939 GPR162Q16538 588 aa7.64□□□□□ -1.19
TRA2B-211ENST00000477939 SMIM5Q71RC9 77 aa7.64□□□□□ -1.19
TRA2B-211ENST00000477939 SECISBP2LQ93073 1101 aaKnown RBP7.64□□□□□ -1.19
TRA2B-211ENST00000477939 TRIM44Q96DX7 344 aaPredicted RBP7.64□□□□□ -1.19
TRA2B-211ENST00000477939 ZNF831Q5JPB2 1677 aa7.63□□□□□ -1.19
TRA2B-211ENST00000477939 HSPA5P11021 654 aaKnown RBP7.63□□□□□ -1.19
TRA2B-211ENST00000477939 PHKG2P15735 406 aa7.63□□□□□ -1.19
TRA2B-211ENST00000477939 FAM43AQ8N2R8 423 aa7.63□□□□□ -1.19
TRA2B-211ENST00000477939 LINC00116Q8NCU8 138 aa7.63□□□□□ -1.19
TRA2B-211ENST00000477939 SMARCC1Q92922 1105 aaPredicted RBP7.63□□□□□ -1.19
TRA2B-211ENST00000477939 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.63□□□□□ -1.197e-10■■■□□ 17.6
TRA2B-211ENST00000477939 SPG7Q9UQ90 795 aa7.63□□□□□ -1.19
TRA2B-211ENST00000477939 C4AP0C0L4 1744 aa7.63□□□□□ -1.19
TRA2B-211ENST00000477939 KDM6AO15550 1401 aaPredicted RBP7.62□□□□□ -1.19
TRA2B-211ENST00000477939 KIAA1551Q9HCM1 1747 aa7.62□□□□□ -1.19
TRA2B-211ENST00000477939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.62□□□□□ -1.19
TRA2B-211ENST00000477939 LOC102724428A0A0B4J2F2 783 aa7.62□□□□□ -1.19
TRA2B-211ENST00000477939 SIK1P57059 783 aa7.62□□□□□ -1.19
TRA2B-211ENST00000477939 EIF4G2P78344 907 aaKnown RBP eCLIP7.62□□□□□ -1.19
TRA2B-211ENST00000477939 ITPK1Q13572 414 aa7.62□□□□□ -1.19
TRA2B-211ENST00000477939 AK7Q96M32 723 aa7.62□□□□□ -1.19
TRA2B-211ENST00000477939 CHMP4BQ9H444 224 aaKnown RBP7.62□□□□□ -1.19
TRA2B-211ENST00000477939 TMOD3Q9NYL9 352 aa7.62□□□□□ -1.19
TRA2B-211ENST00000477939 ASAP1Q9ULH1 1129 aa7.62□□□□□ -1.19
TRA2B-211ENST00000477939 KIF13BQ9NQT8 1826 aa7.62□□□□□ -1.19
TRA2B-211ENST00000477939 MYH14Q7Z406 1995 aaKnown RBP7.61□□□□□ -1.19
TRA2B-211ENST00000477939 CICQ96RK0 1608 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms