RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 EXOC5O00471 708 aa12.16□□□□□ -0.46
PGK1-204ENST00000477335 DDB1Q16531 1140 aa12.16□□□□□ -0.46
PGK1-204ENST00000477335 DUSP27Q5VZP5 1158 aa12.16□□□□□ -0.46
PGK1-204ENST00000477335 SIPA1L3O60292 1781 aaPredicted RBP12.15□□□□□ -0.46
PGK1-204ENST00000477335 IL16Q14005 1332 aa12.15□□□□□ -0.46
PGK1-204ENST00000477335 POLA2Q14181 598 aa12.15□□□□□ -0.46
PGK1-204ENST00000477335 SEPT12Q8IYM1 358 aa12.15□□□□□ -0.46
PGK1-204ENST00000477335 RTF1Q92541 710 aaKnown RBP12.15□□□□□ -0.46
PGK1-204ENST00000477335 TSR2Q969E8 191 aaKnown RBP12.15□□□□□ -0.46
PGK1-204ENST00000477335 MIS18AQ9NYP9 233 aa12.15□□□□□ -0.46
PGK1-204ENST00000477335 VIRMAQ69YN4 1812 aaKnown RBP12.15□□□□□ -0.46
PGK1-204ENST00000477335 FANCIQ9NVI1 1328 aa12.14□□□□□ -0.47
PGK1-204ENST00000477335 RGS12O14924 1447 aa12.14□□□□□ -0.47
PGK1-204ENST00000477335 DCAF5Q96JK2 942 aa12.14□□□□□ -0.47
PGK1-204ENST00000477335 E9PSI1 815 aa12.13□□□□□ -0.47
PGK1-204ENST00000477335 CHL1O00533 1208 aa12.13□□□□□ -0.47
PGK1-204ENST00000477335 KCNQ3O43525 872 aa12.13□□□□□ -0.47
PGK1-204ENST00000477335 RBM6P78332 1123 aaKnown RBP12.13□□□□□ -0.47
PGK1-204ENST00000477335 PDE3BQ13370 1112 aa12.13□□□□□ -0.47
PGK1-204ENST00000477335 FAM182BQ5T319 152 aa12.13□□□□□ -0.47
PGK1-204ENST00000477335 MBIPQ9NS73 344 aa12.13□□□□□ -0.47
PGK1-204ENST00000477335 IFT57Q9NWB7 429 aa12.13□□□□□ -0.47
PGK1-204ENST00000477335 LAS1LQ9Y4W2 734 aaKnown RBP12.13□□□□□ -0.47
PGK1-204ENST00000477335 BRWD3Q6RI45 1802 aa12.13□□□□□ -0.47
PGK1-204ENST00000477335 DOT1LQ8TEK3 1739 aa12.12□□□□□ -0.47
PGK1-204ENST00000477335 A0A0G2JS52 829 aa12.12□□□□□ -0.47
PGK1-204ENST00000477335 MYT1Q01538 1121 aa12.12□□□□□ -0.47
PGK1-204ENST00000477335 KRT24Q2M2I5 525 aa12.12□□□□□ -0.47
PGK1-204ENST00000477335 CFAP44Q96MT7 982 aa12.12□□□□□ -0.47
PGK1-204ENST00000477335 SLC52A2Q9HAB3 445 aa12.12□□□□□ -0.47
PGK1-204ENST00000477335 KDM3BQ7LBC6 1761 aa12.11□□□□□ -0.47
PGK1-204ENST00000477335 HSP90AB1P08238 724 aaKnown RBP12.11□□□□□ -0.47
PGK1-204ENST00000477335 PTF1AQ7RTS3 328 aa12.11□□□□□ -0.47
PGK1-204ENST00000477335 RXRBP28702 533 aa12.1□□□□□ -0.47
PGK1-204ENST00000477335 GNAI1P63096 354 aa12.1□□□□□ -0.47
PGK1-204ENST00000477335 CALD1Q05682 793 aaKnown RBP12.1□□□□□ -0.47
PGK1-204ENST00000477335 TAF7Q15545 349 aaPredicted RBP12.1□□□□□ -0.47
PGK1-204ENST00000477335 NFATC2IPQ8NCF5 419 aa12.1□□□□□ -0.47
PGK1-204ENST00000477335 ACSBG1Q96GR2 724 aa12.1□□□□□ -0.47
PGK1-204ENST00000477335 PAPPAQ13219 1627 aa12.1□□□□□ -0.47
PGK1-204ENST00000477335 ITGB4P16144 1822 aa12.09□□□□□ -0.47
PGK1-204ENST00000477335 ERVV-2B6SEH9 535 aa12.09□□□□□ -0.47
PGK1-204ENST00000477335 EXOSC9Q06265 439 aaKnown RBP12.09□□□□□ -0.47
PGK1-204ENST00000477335 TEFQ10587 303 aa12.09□□□□□ -0.47
PGK1-204ENST00000477335 SLC39A6Q13433 755 aa12.09□□□□□ -0.47
PGK1-204ENST00000477335 TSPYL6Q8N831 410 aa12.09□□□□□ -0.47
PGK1-204ENST00000477335 PIGBQ92521 554 aa12.09□□□□□ -0.47
PGK1-204ENST00000477335 MYH16Q9H6N6 1097 aa12.09□□□□□ -0.47
PGK1-204ENST00000477335 TSPYL4Q9UJ04 414 aa12.09□□□□□ -0.47
PGK1-204ENST00000477335 BTBD11A6QL63 1104 aa12.08□□□□□ -0.48
PGK1-204ENST00000477335 KCNQ2O43526 872 aa12.08□□□□□ -0.48
PGK1-204ENST00000477335 PRIM1P49642 420 aaKnown RBP12.08□□□□□ -0.48
PGK1-204ENST00000477335 CABP4P57796 275 aa12.08□□□□□ -0.48
PGK1-204ENST00000477335 C8orf58Q8NAV2 365 aa12.08□□□□□ -0.48
PGK1-204ENST00000477335 BCL9O00512 1426 aa12.08□□□□□ -0.48
PGK1-204ENST00000477335 KCPQ6ZWJ8 1503 aa12.07□□□□□ -0.48
PGK1-204ENST00000477335 HEG1Q9ULI3 1381 aa12.06□□□□□ -0.48
PGK1-204ENST00000477335 EIF4A1P60842 406 aaKnown RBP12.06□□□□□ -0.48
PGK1-204ENST00000477335 KRT27Q7Z3Y8 459 aa12.06□□□□□ -0.48
PGK1-204ENST00000477335 BABAM1Q9NWV8 329 aa12.06□□□□□ -0.48
PGK1-204ENST00000477335 TMOD3Q9NYL9 352 aa12.06□□□□□ -0.48
PGK1-204ENST00000477335 ASAP1Q9ULH1 1129 aa12.06□□□□□ -0.48
PGK1-204ENST00000477335 NHSQ6T4R5 1651 aa12.06□□□□□ -0.48
PGK1-204ENST00000477335 UBR2Q8IWV8 1755 aa12.05□□□□□ -0.48
PGK1-204ENST00000477335 PRAMEF22A3QJZ6 481 aa12.05□□□□□ -0.48
PGK1-204ENST00000477335 ELL2O00472 640 aaPredicted RBP12.05□□□□□ -0.48
PGK1-204ENST00000477335 ZNF790Q6PG37 636 aa12.05□□□□□ -0.48
PGK1-204ENST00000477335 ATG3Q9NT62 314 aa12.05□□□□□ -0.48
PGK1-204ENST00000477335 C5P01031 1676 aa12.04□□□□□ -0.48
PGK1-204ENST00000477335 VAMP4O75379 141 aa12.04□□□□□ -0.48
PGK1-204ENST00000477335 SYTL4Q96C24 671 aaPredicted RBP12.04□□□□□ -0.48
PGK1-204ENST00000477335 ZNF496Q96IT1 587 aaPredicted RBP12.04□□□□□ -0.48
PGK1-204ENST00000477335 SBF2Q86WG5 1849 aa12.04□□□□□ -0.48
PGK1-204ENST00000477335 CENPBP07199 599 aaPredicted RBP12.03□□□□□ -0.48
PGK1-204ENST00000477335 SLC4A9Q96Q91 983 aa12.03□□□□□ -0.48
PGK1-204ENST00000477335 TWISTNBQ3B726 338 aaPredicted RBP12.02□□□□□ -0.49
PGK1-204ENST00000477335 BTAF1O14981 1849 aa12.02□□□□□ -0.49
PGK1-204ENST00000477335 TCERG1O14776 1098 aaKnown RBP12.01□□□□□ -0.49
PGK1-204ENST00000477335 GIGYF1O75420 1035 aaPredicted RBP12.01□□□□□ -0.49
PGK1-204ENST00000477335 BCAR3O75815 825 aa12.01□□□□□ -0.49
PGK1-204ENST00000477335 RARSP54136 660 aaKnown RBP12.01□□□□□ -0.49
PGK1-204ENST00000477335 RCAN3Q9UKA8 241 aa12.01□□□□□ -0.49
PGK1-204ENST00000477335 PTCD1O75127 700 aaKnown RBP12□□□□□ -0.49
PGK1-204ENST00000477335 SSH1Q8WYL5 1049 aa12□□□□□ -0.49
PGK1-204ENST00000477335 BCL2L13Q9BXK5 485 aa12□□□□□ -0.49
PGK1-204ENST00000477335 TRIM37O94972 964 aa11.99□□□□□ -0.49
PGK1-204ENST00000477335 FAM196AQ6ZSG2 479 aa11.99□□□□□ -0.49
PGK1-204ENST00000477335 TTC5Q8N0Z6 440 aa11.99□□□□□ -0.49
PGK1-204ENST00000477335 NECTIN2Q92692 538 aa11.99□□□□□ -0.49
PGK1-204ENST00000477335 PALLDQ8WX93 1383 aa11.99□□□□□ -0.49
PGK1-204ENST00000477335 TJP1Q07157 1748 aa11.99□□□□□ -0.49
PGK1-204ENST00000477335 RNF123Q5XPI4 1314 aa11.98□□□□□ -0.49
PGK1-204ENST00000477335 CT47B1P0C2W7 299 aaPredicted RBP11.98□□□□□ -0.49
PGK1-204ENST00000477335 MRPL50Q8N5N7 158 aaKnown RBP11.98□□□□□ -0.49
PGK1-204ENST00000477335 FMNL2Q96PY5 1086 aa11.98□□□□□ -0.49
PGK1-204ENST00000477335 BCL11BQ9C0K0 894 aaPredicted RBP11.98□□□□□ -0.49
PGK1-204ENST00000477335 SUPT16HQ9Y5B9 1047 aaKnown RBP11.98□□□□□ -0.49
PGK1-204ENST00000477335 USP16Q9Y5T5 823 aa11.98□□□□□ -0.49
PGK1-204ENST00000477335 EP400Q96L91 3159 aa11.98□□□□□ -0.49
PGK1-204ENST00000477335 TNS1Q9HBL0 1735 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms