RNA–Protein interactions for RNA: ENST00000477148.1

TFRC-212, Transcript of transferrin receptor, humanhuman

TSL 4

Gene TFRC, Length 570 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-212ENST00000477148 TMEM229AB2RXF0 380 aa11.2□□□□□ -0.62
TFRC-212ENST00000477148 LYSMD3Q7Z3D4 306 aa11.2□□□□□ -0.62
TFRC-212ENST00000477148 SIX5Q8N196 739 aa11.2□□□□□ -0.62
TFRC-212ENST00000477148 SERTAD1Q9UHV2 236 aa11.2□□□□□ -0.62
TFRC-212ENST00000477148 USP17L15C9J2P7 530 aa11.19□□□□□ -0.62
TFRC-212ENST00000477148 USP17L10C9JJH3 530 aa11.19□□□□□ -0.62
TFRC-212ENST00000477148 USP17L13C9JLJ4 530 aa11.19□□□□□ -0.62
TFRC-212ENST00000477148 USP17L12C9JPN9 530 aa11.19□□□□□ -0.62
TFRC-212ENST00000477148 USP17L11C9JVI0 530 aa11.19□□□□□ -0.62
TFRC-212ENST00000477148 USP17L21D6R901 530 aa11.19□□□□□ -0.62
TFRC-212ENST00000477148 USP17L18D6R9N7 530 aa11.19□□□□□ -0.62
TFRC-212ENST00000477148 USP17L22D6RA61 530 aa11.19□□□□□ -0.62
TFRC-212ENST00000477148 USP17L17D6RBQ6 530 aa11.19□□□□□ -0.62
TFRC-212ENST00000477148 USP17L19D6RCP7 530 aa11.19□□□□□ -0.62
TFRC-212ENST00000477148 USP17L20D6RJB6 530 aa11.19□□□□□ -0.62
TFRC-212ENST00000477148 ZBTB7BO15156 539 aaPredicted RBP11.19□□□□□ -0.62
TFRC-212ENST00000477148 USP17L24Q0WX57 530 aa11.19□□□□□ -0.62
TFRC-212ENST00000477148 CDCA8Q53HL2 280 aa11.19□□□□□ -0.62
TFRC-212ENST00000477148 PBXIP1Q96AQ6 731 aa11.19□□□□□ -0.62
TFRC-212ENST00000477148 ZSCAN10Q96SZ4 725 aaPredicted RBP11.19□□□□□ -0.62
TFRC-212ENST00000477148 HRH3Q9Y5N1 445 aa11.19□□□□□ -0.62
TFRC-212ENST00000477148 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.18□□□□□ -0.62
TFRC-212ENST00000477148 CRTC2Q53ET0 693 aaPredicted RBP11.18□□□□□ -0.62
TFRC-212ENST00000477148 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.18□□□□□ -0.62
TFRC-212ENST00000477148 GRIP2Q9C0E4 1043 aa11.18□□□□□ -0.62
TFRC-212ENST00000477148 ZNF358Q9NW07 568 aa11.18□□□□□ -0.62
TFRC-212ENST00000477148 CCDC180Q9P1Z9 1646 aa11.17□□□□□ -0.62
TFRC-212ENST00000477148 PTK7Q13308 1070 aa11.17□□□□□ -0.62
TFRC-212ENST00000477148 PRICKLE2Q7Z3G6 844 aa11.17□□□□□ -0.62
TFRC-212ENST00000477148 FHDC1Q9C0D6 1143 aaPredicted RBP11.17□□□□□ -0.62
TFRC-212ENST00000477148 SMTNP53814 917 aa11.16□□□□□ -0.62
TFRC-212ENST00000477148 GNASQ5JWF2 1037 aa11.16□□□□□ -0.62
TFRC-212ENST00000477148 TMEM214Q6NUQ4 689 aaKnown RBP11.16□□□□□ -0.62
TFRC-212ENST00000477148 SLC4A9Q96Q91 983 aa11.16□□□□□ -0.62
TFRC-212ENST00000477148 ARID3AQ99856 593 aa11.16□□□□□ -0.62
TFRC-212ENST00000477148 SEC13P55735 322 aa11.15□□□□□ -0.62
TFRC-212ENST00000477148 ANKMY2Q8IV38 441 aa11.15□□□□□ -0.62
TFRC-212ENST00000477148 DPYDQ12882 1025 aa11.14□□□□□ -0.63
TFRC-212ENST00000477148 NBPF15Q8N660 670 aa11.14□□□□□ -0.63
TFRC-212ENST00000477148 A6NJY4 79 aa11.13□□□□□ -0.63
TFRC-212ENST00000477148 SFI1A8K8P3 1242 aa11.13□□□□□ -0.63
TFRC-212ENST00000477148 SPATA31C2B4DYI2 1134 aa11.13□□□□□ -0.63
TFRC-212ENST00000477148 M0R2N6 131 aa11.13□□□□□ -0.63
TFRC-212ENST00000477148 RHOQP17081 205 aa11.13□□□□□ -0.63
TFRC-212ENST00000477148 SRPK2P78362 688 aaKnown RBP11.13□□□□□ -0.63
TFRC-212ENST00000477148 TAS1R3Q7RTX0 852 aa11.13□□□□□ -0.63
TFRC-212ENST00000477148 PPP1R15AO75807 674 aaPredicted RBP11.12□□□□□ -0.63
TFRC-212ENST00000477148 DKK1O94907 266 aa11.12□□□□□ -0.63
TFRC-212ENST00000477148 PTSQ03393 145 aa11.12□□□□□ -0.63
TFRC-212ENST00000477148 POU4F2Q12837 409 aa11.12□□□□□ -0.63
TFRC-212ENST00000477148 MTFR1Q15390 333 aa11.12□□□□□ -0.63
TFRC-212ENST00000477148 NBPF10Q6P3W6 841 aaKnown RBP11.12□□□□□ -0.63
TFRC-212ENST00000477148 PPARGC1BQ86YN6 1023 aaKnown RBP11.12□□□□□ -0.63
TFRC-212ENST00000477148 RHBDD1Q8TEB9 315 aa11.12□□□□□ -0.63
TFRC-212ENST00000477148 NOVA2Q9UNW9 492 aaKnown RBP11.12□□□□□ -0.63
TFRC-212ENST00000477148 CDK2AP1O14519 115 aa11.11□□□□□ -0.63
TFRC-212ENST00000477148 ATG7O95352 703 aa11.11□□□□□ -0.63
TFRC-212ENST00000477148 WDR44Q5JSH3 913 aa11.11□□□□□ -0.63
TFRC-212ENST00000477148 FAM200AQ8TCP9 573 aa11.11□□□□□ -0.63
TFRC-212ENST00000477148 TNS4Q8IZW8 715 aa11.1□□□□□ -0.63
TFRC-212ENST00000477148 TSEN2Q8NCE0 465 aaKnown RBP11.1□□□□□ -0.63
TFRC-212ENST00000477148 SCHIP1Q9P0W5 487 aaPredicted RBP11.1□□□□□ -0.63
TFRC-212ENST00000477148 ELOAQ14241 798 aaKnown RBP11.09□□□□□ -0.63
TFRC-212ENST00000477148 NIFKQ9BYG3 293 aaKnown RBP11.09□□□□□ -0.63
TFRC-212ENST00000477148 ARXQ96QS3 562 aa11.08□□□□□ -0.64
TFRC-212ENST00000477148 HINFPQ9BQA5 517 aa11.08□□□□□ -0.64
TFRC-212ENST00000477148 TIMMDC1Q9NPL8 285 aa11.08□□□□□ -0.64
TFRC-212ENST00000477148 NXF1Q9UBU9 619 aaKnown RBP11.08□□□□□ -0.64
TFRC-212ENST00000477148 EPHA4P54764 986 aa11.07□□□□□ -0.64
TFRC-212ENST00000477148 C4orf17Q53FE4 359 aa11.07□□□□□ -0.64
TFRC-212ENST00000477148 CCDC155Q8N6L0 562 aa11.07□□□□□ -0.64
TFRC-212ENST00000477148 IQSEC3Q9UPP2 1182 aaPredicted RBP11.07□□□□□ -0.64
TFRC-212ENST00000477148 ACIN1Q9UKV3 1341 aaKnown RBP11.07□□□□□ -0.64
TFRC-212ENST00000477148 SLC35F4A4IF30 521 aa11.06□□□□□ -0.64
TFRC-212ENST00000477148 PHKA2P46019 1235 aa11.06□□□□□ -0.64
TFRC-212ENST00000477148 PLA2G4AP47712 749 aa11.06□□□□□ -0.64
TFRC-212ENST00000477148 FOXK2Q01167 660 aa11.06□□□□□ -0.64
TFRC-212ENST00000477148 SLC9A9Q8IVB4 645 aa11.06□□□□□ -0.64
TFRC-212ENST00000477148 CABP1Q9NZU7 370 aa11.06□□□□□ -0.64
TFRC-212ENST00000477148 DYRK1BQ9Y463 629 aa11.06□□□□□ -0.64
TFRC-212ENST00000477148 SENP3-EIF4A1A0A087X0R7 540 aa11.05□□□□□ -0.64
TFRC-212ENST00000477148 NPAS3Q8IXF0 933 aa11.05□□□□□ -0.64
TFRC-212ENST00000477148 ZMIZ1Q9ULJ6 1067 aa11.05□□□□□ -0.64
TFRC-212ENST00000477148 CHMP3Q9Y3E7 222 aa11.05□□□□□ -0.64
TFRC-212ENST00000477148 USP3Q9Y6I4 520 aa11.05□□□□□ -0.64
TFRC-212ENST00000477148 STK32AQ8WU08 396 aa11.04□□□□□ -0.64
TFRC-212ENST00000477148 TSPAN10Q9H1Z9 355 aaPredicted RBP11.04□□□□□ -0.64
TFRC-212ENST00000477148 A0A1B0GTH6 734 aa11.03□□□□□ -0.64
TFRC-212ENST00000477148 TERTO14746 1132 aaKnown RBP11.03□□□□□ -0.64
TFRC-212ENST00000477148 PPFIA3O75145 1194 aa11.03□□□□□ -0.64
TFRC-212ENST00000477148 PSMA6P60900 246 aaKnown RBP11.03□□□□□ -0.64
TFRC-212ENST00000477148 TBCELQ5QJ74 424 aa11.03□□□□□ -0.64
TFRC-212ENST00000477148 SLC16A10Q8TF71 515 aa11.03□□□□□ -0.64
TFRC-212ENST00000477148 SWI5Q1ZZU3 235 aa11.02□□□□□ -0.65
TFRC-212ENST00000477148 NBPF1Q3BBV0 1214 aa11.02□□□□□ -0.65
TFRC-212ENST00000477148 GAS2L1Q99501 681 aaPredicted RBP11.02□□□□□ -0.65
TFRC-212ENST00000477148 H3BM21 787 aa11.01□□□□□ -0.65
TFRC-212ENST00000477148 PPP1R12BO60237 982 aaPredicted RBP11.01□□□□□ -0.65
TFRC-212ENST00000477148 ITGA6P23229 1130 aa11.01□□□□□ -0.65
TFRC-212ENST00000477148 TEAD4Q15561 434 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 175.2 ms