RNA–Protein interactions for RNA: ENST00000476652.2

CEP78-208, Transcript of centrosomal protein 78, human

TSL 3

Gene CEP78, Length 634 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEP78-208	ENST00000476652	ITPK1	Q13572	414 aa		28.94	■■■□□ 2.22
CEP78-208	ENST00000476652	PLEKHO1	Q53GL0	409 aa	Predicted RBP	28.94	■■■□□ 2.22
CEP78-208	ENST00000476652	AEBP1	Q8IUX7	1158 aa		28.94	■■■□□ 2.22
CEP78-208	ENST00000476652	KDM6A	O15550	1401 aa	Predicted RBP	28.94	■■■□□ 2.22
CEP78-208	ENST00000476652	ATP6V1A	P38606	617 aa		28.93	■■■□□ 2.22
CEP78-208	ENST00000476652	SCN11A	Q9UI33	1791 aa		28.93	■■■□□ 2.22
CEP78-208	ENST00000476652	KDR	P35968	1356 aa		28.92	■■■□□ 2.22
CEP78-208	ENST00000476652	HSP90AB1	P08238	724 aa	Known RBP	28.92	■■■□□ 2.22
CEP78-208	ENST00000476652	AMER1	Q5JTC6	1135 aa	Predicted RBP	28.92	■■■□□ 2.22
CEP78-208	ENST00000476652	ZNF530	Q6P9A1	599 aa	Predicted RBP	28.92	■■■□□ 2.22
CEP78-208	ENST00000476652	DCAF5	Q96JK2	942 aa		28.92	■■■□□ 2.22
CEP78-208	ENST00000476652	ERVV-2	B6SEH9	535 aa		28.91	■■■□□ 2.22
CEP78-208	ENST00000476652	SSFA2	P28290	1259 aa		28.91	■■■□□ 2.22
CEP78-208	ENST00000476652	AMOT	Q4VCS5	1084 aa		28.9	■■■□□ 2.22
CEP78-208	ENST00000476652	GNPAT	O15228	680 aa		28.89	■■■□□ 2.22
CEP78-208	ENST00000476652	SULT6B1	Q6IMI4	303 aa		28.88	■■■□□ 2.21
CEP78-208	ENST00000476652	MYH14	Q7Z406	1995 aa	Known RBP	28.88	■■■□□ 2.21
CEP78-208	ENST00000476652	YBX3	P16989	372 aa	Known RBP eCLIP	28.87	■■■□□ 2.21
CEP78-208	ENST00000476652	IL13	P35225	146 aa		28.87	■■■□□ 2.21
CEP78-208	ENST00000476652	CD2AP	Q9Y5K6	639 aa		28.87	■■■□□ 2.21
CEP78-208	ENST00000476652	SLC4A9	Q96Q91	983 aa		28.85	■■■□□ 2.21
CEP78-208	ENST00000476652	C4A	P0C0L4	1744 aa		28.84	■■■□□ 2.21
CEP78-208	ENST00000476652	CABP4	P57796	275 aa		28.84	■■■□□ 2.21
CEP78-208	ENST00000476652	C1orf141	Q5JVX7	400 aa		28.84	■■■□□ 2.21
CEP78-208	ENST00000476652	RBM42	Q9BTD8	480 aa	Known RBP	28.84	■■■□□ 2.21
CEP78-208	ENST00000476652	MTHFS	P49914	203 aa		28.83	■■■□□ 2.21
CEP78-208	ENST00000476652	TJP1	Q07157	1748 aa		28.82	■■■□□ 2.2
CEP78-208	ENST00000476652	KIF13B	Q9NQT8	1826 aa		28.81	■■■□□ 2.2
CEP78-208	ENST00000476652	GRIN3B	O60391	1043 aa		28.81	■■■□□ 2.2
CEP78-208	ENST00000476652	CIC	Q96RK0	1608 aa	Predicted RBP	28.8	■■■□□ 2.2
CEP78-208	ENST00000476652	PER1	O15534	1290 aa	Predicted RBP	28.8	■■■□□ 2.2
CEP78-208	ENST00000476652	RTCB	Q9Y3I0	505 aa	Known RBP	28.78	■■■□□ 2.2
CEP78-208	ENST00000476652	CNTNAP4	Q9C0A0	1308 aa		28.77	■■■□□ 2.2
CEP78-208	ENST00000476652	CC2D1B	Q5T0F9	858 aa	Known RBP	28.77	■■■□□ 2.2
CEP78-208	ENST00000476652	NFATC2IP	Q8NCF5	419 aa		28.77	■■■□□ 2.2
CEP78-208	ENST00000476652	RC3H1	Q5TC82	1133 aa	Known RBP	28.76	■■■□□ 2.19
CEP78-208	ENST00000476652	KIAA1551	Q9HCM1	1747 aa		28.76	■■■□□ 2.19
CEP78-208	ENST00000476652	TRAPPC3L	Q5T215	181 aa		28.75	■■■□□ 2.19
CEP78-208	ENST00000476652	N4BP2	Q86UW6	1770 aa	Predicted RBP	28.75	■■■□□ 2.19
CEP78-208	ENST00000476652	PTCD1	O75127	700 aa	Known RBP	28.74	■■■□□ 2.19
CEP78-208	ENST00000476652	MMP10	P09238	476 aa		28.73	■■■□□ 2.19
CEP78-208	ENST00000476652	HMOX1	P09601	288 aa		28.73	■■■□□ 2.19
CEP78-208	ENST00000476652	AKAP4	Q5JQC9	854 aa		28.73	■■■□□ 2.19
CEP78-208	ENST00000476652	ADAMTS7	Q9UKP4	1686 aa		28.73	■■■□□ 2.19
CEP78-208	ENST00000476652	ADRA2B	P18089	450 aa		28.72	■■■□□ 2.19
CEP78-208	ENST00000476652	MRC1	P22897	1456 aa		28.72	■■■□□ 2.19
CEP78-208	ENST00000476652	RPS6KA4	O75676	772 aa		28.71	■■■□□ 2.19
CEP78-208	ENST00000476652	ARHGEF1	Q92888	912 aa	Known RBP	28.71	■■■□□ 2.19
CEP78-208	ENST00000476652	WWC3	Q9ULE0	1092 aa		28.7	■■■□□ 2.18
CEP78-208	ENST00000476652	DIAPH1	O60610	1272 aa	Known RBP	28.69	■■■□□ 2.18
CEP78-208	ENST00000476652	NPC1L1	Q9UHC9	1359 aa		28.69	■■■□□ 2.18
CEP78-208	ENST00000476652	COL3A1	P02461	1466 aa	Predicted RBP	28.69	■■■□□ 2.18
CEP78-208	ENST00000476652	NLGN1	Q8N2Q7	840 aa		28.68	■■■□□ 2.18
CEP78-208	ENST00000476652	LGR6	Q9HBX8	967 aa		28.68	■■■□□ 2.18
CEP78-208	ENST00000476652	RFC4	P35249	363 aa		28.67	■■■□□ 2.18
CEP78-208	ENST00000476652	CRKL	P46109	303 aa	Known RBP	28.67	■■■□□ 2.18
CEP78-208	ENST00000476652	SLC52A2	Q9HAB3	445 aa		28.67	■■■□□ 2.18
CEP78-208	ENST00000476652	BRCA1	P38398	1863 aa	Known RBP	28.67	■■■□□ 2.18
CEP78-208	ENST00000476652	GYS1	P13807	737 aa		28.66	■■■□□ 2.18
CEP78-208	ENST00000476652	CNGB1	Q14028	1251 aa	Predicted RBP	28.66	■■■□□ 2.18
CEP78-208	ENST00000476652	PXDNL	A1KZ92	1463 aa		28.66	■■■□□ 2.18
CEP78-208	ENST00000476652	UBR2	Q8IWV8	1755 aa		28.65	■■■□□ 2.18
CEP78-208	ENST00000476652	C1QTNF8	P60827	252 aa		28.65	■■■□□ 2.18
CEP78-208	ENST00000476652	C10orf71	Q711Q0	1435 aa		28.64	■■■□□ 2.18
CEP78-208	ENST00000476652	RNMT	O43148	476 aa	Known RBP	28.64	■■■□□ 2.18
CEP78-208	ENST00000476652	MTHFSD	Q2M296	383 aa	Known RBP	28.64	■■■□□ 2.18
CEP78-208	ENST00000476652	KCP	Q6ZWJ8	1503 aa		28.63	■■■□□ 2.17
CEP78-208	ENST00000476652	ATP10D	Q9P241	1426 aa		28.62	■■■□□ 2.17
CEP78-208	ENST00000476652	GIGYF1	O75420	1035 aa	Predicted RBP	28.62	■■■□□ 2.17
CEP78-208	ENST00000476652	SIPA1L3	O60292	1781 aa	Predicted RBP	28.6	■■■□□ 2.17
CEP78-208	ENST00000476652	ADCY9	O60503	1353 aa		28.6	■■■□□ 2.17
CEP78-208	ENST00000476652	SLC39A6	Q13433	755 aa		28.59	■■■□□ 2.17
CEP78-208	ENST00000476652	INTS5	Q6P9B9	1019 aa	Known RBP	28.59	■■■□□ 2.17
CEP78-208	ENST00000476652	DNAJC10	Q8IXB1	793 aa		28.59	■■■□□ 2.17
CEP78-208	ENST00000476652	SRP68	Q9UHB9	627 aa	Known RBP	28.59	■■■□□ 2.17
CEP78-208	ENST00000476652	CCDC87	Q9NVE4	849 aa		28.58	■■■□□ 2.17
CEP78-208	ENST00000476652	PARP3	Q9Y6F1	533 aa		28.58	■■■□□ 2.17
CEP78-208	ENST00000476652	USP42	Q9H9J4	1324 aa	Known RBP	28.58	■■■□□ 2.17
CEP78-208	ENST00000476652	TGFB2	P61812	414 aa		28.57	■■■□□ 2.16
CEP78-208	ENST00000476652	ARFGEF1	Q9Y6D6	1849 aa		28.57	■■■□□ 2.16
CEP78-208	ENST00000476652	U2SURP	O15042	1029 aa	Known RBP	28.56	■■■□□ 2.16
CEP78-208	ENST00000476652		A0A0G2JLW4	131 aa		28.55	■■■□□ 2.16
CEP78-208	ENST00000476652	AFDN	P55196	1824 aa	Known RBP	28.55	■■■□□ 2.16
CEP78-208	ENST00000476652	SENP3-EIF4A1	A0A087X0R7	540 aa		28.54	■■■□□ 2.16
CEP78-208	ENST00000476652	FKBP8	Q14318	412 aa		28.54	■■■□□ 2.16
CEP78-208	ENST00000476652	SOS1	Q07889	1333 aa	Predicted RBP	28.52	■■■□□ 2.16
CEP78-208	ENST00000476652	CYP19A1	P11511	503 aa	Predicted RBP	28.52	■■■□□ 2.16
CEP78-208	ENST00000476652	DPEP1	P16444	411 aa		28.51	■■■□□ 2.15
CEP78-208	ENST00000476652	DDR1	Q08345	913 aa		28.51	■■■□□ 2.15
CEP78-208	ENST00000476652	BCS1L	Q9Y276	419 aa		28.51	■■■□□ 2.15
CEP78-208	ENST00000476652	GPBP1L1	Q9HC44	474 aa	Predicted RBP	28.49	■■■□□ 2.15
CEP78-208	ENST00000476652	VSIG10	Q8N0Z9	540 aa		28.48	■■■□□ 2.15
CEP78-208	ENST00000476652	GAS2L2	Q8NHY3	880 aa		28.48	■■■□□ 2.15
CEP78-208	ENST00000476652	ZNF526	Q8TF50	670 aa	Predicted RBP	28.48	■■■□□ 2.15
CEP78-208	ENST00000476652	ZBTB1	Q9Y2K1	713 aa		28.48	■■■□□ 2.15
CEP78-208	ENST00000476652	COL15A1	P39059	1388 aa		28.48	■■■□□ 2.15
CEP78-208	ENST00000476652	NRXN2	Q9P2S2	1712 aa		28.47	■■■□□ 2.15
CEP78-208	ENST00000476652	GNAT3	A8MTJ3	354 aa		28.47	■■■□□ 2.15
CEP78-208	ENST00000476652	ZPR1	O75312	459 aa		28.47	■■■□□ 2.15
CEP78-208	ENST00000476652	USPL1	Q5W0Q7	1092 aa		28.47	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms