RNA–Protein interactions for RNA: ENST00000476018.2

VSTM4-203, Transcript of V-set and transmembrane domain containing 4, humanhuman

TSL 5

Gene VSTM4, Length 659 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-203ENST00000476018 IFNL2Q8IZJ0 200 aa17.77■□□□□ 0.44
VSTM4-203ENST00000476018 MSL1Q68DK7 614 aa17.76■□□□□ 0.43
VSTM4-203ENST00000476018 NLGN2Q8NFZ4 835 aa17.76■□□□□ 0.43
VSTM4-203ENST00000476018 PIGBQ92521 554 aa17.76■□□□□ 0.43
VSTM4-203ENST00000476018 TMOD3Q9NYL9 352 aa17.76■□□□□ 0.43
VSTM4-203ENST00000476018 GRIN3BO60391 1043 aa17.75■□□□□ 0.43
VSTM4-203ENST00000476018 PHKG2P15735 406 aa17.74■□□□□ 0.43
VSTM4-203ENST00000476018 TNNT2P45379 298 aaPredicted RBP17.74■□□□□ 0.43
VSTM4-203ENST00000476018 EIF4A2Q14240 407 aaKnown RBP17.74■□□□□ 0.43
VSTM4-203ENST00000476018 CD2APQ9Y5K6 639 aa17.74■□□□□ 0.43
VSTM4-203ENST00000476018 LOC102724428A0A0B4J2F2 783 aa17.73■□□□□ 0.43
VSTM4-203ENST00000476018 HSPA5P11021 654 aaKnown RBP17.73■□□□□ 0.43
VSTM4-203ENST00000476018 SSFA2P28290 1259 aa17.73■□□□□ 0.43
VSTM4-203ENST00000476018 SIK1P57059 783 aa17.73■□□□□ 0.43
VSTM4-203ENST00000476018 POTEHQ6S545 545 aa17.73■□□□□ 0.43
VSTM4-203ENST00000476018 UBR3Q6ZT12 1888 aa17.72■□□□□ 0.43
VSTM4-203ENST00000476018 IGSF1Q8N6C5 1336 aa17.72■□□□□ 0.43
VSTM4-203ENST00000476018 PHF14O94880 888 aa17.71■□□□□ 0.43
VSTM4-203ENST00000476018 HSP90AB1P08238 724 aaKnown RBP17.71■□□□□ 0.43
VSTM4-203ENST00000476018 PANK3Q9H999 370 aa17.71■□□□□ 0.43
VSTM4-203ENST00000476018 ZBTB12Q9Y330 459 aaPredicted RBP17.71■□□□□ 0.43
VSTM4-203ENST00000476018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.7■□□□□ 0.42
VSTM4-203ENST00000476018 ATP6V1AP38606 617 aa17.69■□□□□ 0.42
VSTM4-203ENST00000476018 LINC00116Q8NCU8 138 aa17.69■□□□□ 0.42
VSTM4-203ENST00000476018 YBX3P16989 372 aaKnown RBP eCLIP17.68■□□□□ 0.42
VSTM4-203ENST00000476018 PLEKHO1Q53GL0 409 aaPredicted RBP17.68■□□□□ 0.42
VSTM4-203ENST00000476018 CCER1Q8TC90 406 aaPredicted RBP17.68■□□□□ 0.42
VSTM4-203ENST00000476018 ASAP1Q9ULH1 1129 aa17.68■□□□□ 0.42
VSTM4-203ENST00000476018 ERVV-2B6SEH9 535 aa17.67■□□□□ 0.42
VSTM4-203ENST00000476018 AMOTQ4VCS5 1084 aa17.67■□□□□ 0.42
VSTM4-203ENST00000476018 MORC1Q86VD1 984 aa17.67■□□□□ 0.42
VSTM4-203ENST00000476018 DCAF5Q96JK2 942 aa17.67■□□□□ 0.42
VSTM4-203ENST00000476018 ATG3Q9NT62 314 aa17.67■□□□□ 0.42
VSTM4-203ENST00000476018 GNPATO15228 680 aa17.66■□□□□ 0.42
VSTM4-203ENST00000476018 C1QTNF8P60827 252 aa17.66■□□□□ 0.42
VSTM4-203ENST00000476018 AMIGO3Q86WK7 504 aa17.66■□□□□ 0.42
VSTM4-203ENST00000476018 ZNF831Q5JPB2 1677 aa17.65■□□□□ 0.42
VSTM4-203ENST00000476018 GIGYF1O75420 1035 aaPredicted RBP17.65■□□□□ 0.42
VSTM4-203ENST00000476018 ITPK1Q13572 414 aa17.65■□□□□ 0.42
VSTM4-203ENST00000476018 KNSTRNQ9Y448 316 aa17.65■□□□□ 0.42
VSTM4-203ENST00000476018 KDRP35968 1356 aa17.65■□□□□ 0.42
VSTM4-203ENST00000476018 ZNF530Q6P9A1 599 aaPredicted RBP17.64■□□□□ 0.41
VSTM4-203ENST00000476018 C1orf141Q5JVX7 400 aa17.63■□□□□ 0.41
VSTM4-203ENST00000476018 RTCBQ9Y3I0 505 aaKnown RBP17.63■□□□□ 0.41
VSTM4-203ENST00000476018 SENP3-EIF4A1A0A087X0R7 540 aa17.62■□□□□ 0.41
VSTM4-203ENST00000476018 CABP4P57796 275 aa17.61■□□□□ 0.41
VSTM4-203ENST00000476018 TRAPPC3LQ5T215 181 aa17.61■□□□□ 0.41
VSTM4-203ENST00000476018 SMIM5Q71RC9 77 aa17.61■□□□□ 0.41
VSTM4-203ENST00000476018 KDM6AO15550 1401 aaPredicted RBP17.61■□□□□ 0.41
VSTM4-203ENST00000476018 MTHFSP49914 203 aa17.6■□□□□ 0.41
VSTM4-203ENST00000476018 RC3H1Q5TC82 1133 aaKnown RBP17.6■□□□□ 0.41
VSTM4-203ENST00000476018 CNTNAP4Q9C0A0 1308 aa17.6■□□□□ 0.41
VSTM4-203ENST00000476018 COL5A3P25940 1745 aaPredicted RBP17.59■□□□□ 0.41
VSTM4-203ENST00000476018 ATP10DQ9P241 1426 aa17.58■□□□□ 0.41
VSTM4-203ENST00000476018 MMP10P09238 476 aa17.58■□□□□ 0.4
VSTM4-203ENST00000476018 SULT6B1Q6IMI4 303 aa17.58■□□□□ 0.4
VSTM4-203ENST00000476018 AEBP1Q8IUX7 1158 aa17.58■□□□□ 0.4
VSTM4-203ENST00000476018 NLGN1Q8N2Q7 840 aa17.58■□□□□ 0.4
VSTM4-203ENST00000476018 SLC4A9Q96Q91 983 aa17.57■□□□□ 0.4
VSTM4-203ENST00000476018 IL13P35225 146 aa17.56■□□□□ 0.4
VSTM4-203ENST00000476018 RFC4P35249 363 aa17.56■□□□□ 0.4
VSTM4-203ENST00000476018 CICQ96RK0 1608 aaPredicted RBP17.55■□□□□ 0.4
VSTM4-203ENST00000476018 RPS6KA4O75676 772 aa17.55■□□□□ 0.4
VSTM4-203ENST00000476018 AMER1Q5JTC6 1135 aaPredicted RBP17.55■□□□□ 0.4
VSTM4-203ENST00000476018 ADCY9O60503 1353 aa17.54■□□□□ 0.4
VSTM4-203ENST00000476018 KIF13BQ9NQT8 1826 aa17.54■□□□□ 0.4
VSTM4-203ENST00000476018 KIF7Q2M1P5 1343 aa17.54■□□□□ 0.4
VSTM4-203ENST00000476018 TGFB2P61812 414 aa17.54■□□□□ 0.4
VSTM4-203ENST00000476018 NFATC2IPQ8NCF5 419 aa17.54■□□□□ 0.4
VSTM4-203ENST00000476018 ARHGEF1Q92888 912 aaKnown RBP17.54■□□□□ 0.4
VSTM4-203ENST00000476018 GPBP1L1Q9HC44 474 aaPredicted RBP17.54■□□□□ 0.4
VSTM4-203ENST00000476018 PXDNLA1KZ92 1463 aa17.53■□□□□ 0.4
VSTM4-203ENST00000476018 PTCD1O75127 700 aaKnown RBP17.53■□□□□ 0.4
VSTM4-203ENST00000476018 AKAP4Q5JQC9 854 aa17.53■□□□□ 0.4
VSTM4-203ENST00000476018 CCDC87Q9NVE4 849 aa17.53■□□□□ 0.4
VSTM4-203ENST00000476018 C10orf71Q711Q0 1435 aa17.53■□□□□ 0.4
VSTM4-203ENST00000476018 GYS1P13807 737 aa17.52■□□□□ 0.4
VSTM4-203ENST00000476018 WWC3Q9ULE0 1092 aa17.52■□□□□ 0.4
VSTM4-203ENST00000476018 PARP3Q9Y6F1 533 aa17.52■□□□□ 0.4
VSTM4-203ENST00000476018 SCN11AQ9UI33 1791 aa17.52■□□□□ 0.4
VSTM4-203ENST00000476018 C4AP0C0L4 1744 aa17.52■□□□□ 0.39
VSTM4-203ENST00000476018 MYH14Q7Z406 1995 aaKnown RBP17.51■□□□□ 0.39
VSTM4-203ENST00000476018 CRKLP46109 303 aaKnown RBP17.5■□□□□ 0.39
VSTM4-203ENST00000476018 SLC52A2Q9HAB3 445 aa17.5■□□□□ 0.39
VSTM4-203ENST00000476018 CEP350Q5VT06 3117 aa17.49■□□□□ 0.39
VSTM4-203ENST00000476018 TJP1Q07157 1748 aa17.49■□□□□ 0.39
VSTM4-203ENST00000476018 KIAA1551Q9HCM1 1747 aa17.49■□□□□ 0.39
VSTM4-203ENST00000476018 MRC1P22897 1456 aa17.49■□□□□ 0.39
VSTM4-203ENST00000476018 BCS1LQ9Y276 419 aa17.48■□□□□ 0.39
VSTM4-203ENST00000476018 N4BP2Q86UW6 1770 aaPredicted RBP17.48■□□□□ 0.39
VSTM4-203ENST00000476018 USP42Q9H9J4 1324 aaKnown RBP17.47■□□□□ 0.39
VSTM4-203ENST00000476018 DIAPH1O60610 1272 aaKnown RBP17.47■□□□□ 0.39
VSTM4-203ENST00000476018 ZNF526Q8TF50 670 aaPredicted RBP17.47■□□□□ 0.39
VSTM4-203ENST00000476018 A0A0G2JLW4 131 aa17.46■□□□□ 0.39
VSTM4-203ENST00000476018 HMOX1P09601 288 aa17.46■□□□□ 0.39
VSTM4-203ENST00000476018 NPC1L1Q9UHC9 1359 aa17.45■□□□□ 0.38
VSTM4-203ENST00000476018 PER1O15534 1290 aaPredicted RBP17.45■□□□□ 0.38
VSTM4-203ENST00000476018 RNMTO43148 476 aaKnown RBP17.45■□□□□ 0.38
VSTM4-203ENST00000476018 CC2D1BQ5T0F9 858 aaKnown RBP17.45■□□□□ 0.38
VSTM4-203ENST00000476018 ZPR1O75312 459 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms