RNA–Protein interactions for RNA: ENST00000474833.5

PCCB-212, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 5

Gene PCCB, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-212ENST00000474833 TOMM70O94826 608 aa20.67■□□□□ 0.9
PCCB-212ENST00000474833 ZNF831Q5JPB2 1677 aa20.67■□□□□ 0.9
PCCB-212ENST00000474833 C4AP0C0L4 1744 aa20.66■□□□□ 0.9
PCCB-212ENST00000474833 COL5A3P25940 1745 aaPredicted RBP20.66■□□□□ 0.9
PCCB-212ENST00000474833 NMRK2Q9NPI5 230 aa20.65■□□□□ 0.9
PCCB-212ENST00000474833 SLC24A1O60721 1099 aa20.64■□□□□ 0.89
PCCB-212ENST00000474833 SLC4A9Q96Q91 983 aa20.64■□□□□ 0.89
PCCB-212ENST00000474833 CARD14Q9BXL6 1004 aa20.64■□□□□ 0.89
PCCB-212ENST00000474833 ATG3Q9NT62 314 aa20.64■□□□□ 0.89
PCCB-212ENST00000474833 TMOD3Q9NYL9 352 aa20.64■□□□□ 0.89
PCCB-212ENST00000474833 A0A0G2JLW4 131 aa20.63■□□□□ 0.89
PCCB-212ENST00000474833 ATP6V1AP38606 617 aa20.63■□□□□ 0.89
PCCB-212ENST00000474833 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.63■□□□□ 0.89
PCCB-212ENST00000474833 SPG7Q9UQ90 795 aa20.63■□□□□ 0.89
PCCB-212ENST00000474833 PHKG2P15735 406 aa20.62■□□□□ 0.89
PCCB-212ENST00000474833 TGFB2P61812 414 aa20.62■□□□□ 0.89
PCCB-212ENST00000474833 BCS1LQ9Y276 419 aa20.62■□□□□ 0.89
PCCB-212ENST00000474833 ARFGEF1Q9Y6D6 1849 aa20.61■□□□□ 0.89
PCCB-212ENST00000474833 DPEP1P16444 411 aa20.6■□□□□ 0.89
PCCB-212ENST00000474833 TMF1P82094 1093 aa20.6■□□□□ 0.89
PCCB-212ENST00000474833 EYA1Q99502 592 aa20.6■□□□□ 0.89
PCCB-212ENST00000474833 WASHC2AQ641Q2 1341 aa20.59■□□□□ 0.89
PCCB-212ENST00000474833 KCNA3P22001 575 aa20.59■□□□□ 0.89
PCCB-212ENST00000474833 GYS1P13807 737 aa20.58■□□□□ 0.89
PCCB-212ENST00000474833 MYH14Q7Z406 1995 aaKnown RBP20.57■□□□□ 0.88
PCCB-212ENST00000474833 HTRA3P83110 453 aa20.57■□□□□ 0.88
PCCB-212ENST00000474833 ARHGAP27Q6ZUM4 889 aa20.57■□□□□ 0.88
PCCB-212ENST00000474833 IFNL2Q8IZJ0 200 aa20.57■□□□□ 0.88
PCCB-212ENST00000474833 NLGN1Q8N2Q7 840 aa20.57■□□□□ 0.88
PCCB-212ENST00000474833 RBM46Q8TBY0 533 aaKnown RBP20.57■□□□□ 0.88
PCCB-212ENST00000474833 PLEKHG2Q9H7P9 1386 aa20.57■□□□□ 0.88
PCCB-212ENST00000474833 TRAPPC3LQ5T215 181 aa20.56■□□□□ 0.88
PCCB-212ENST00000474833 JMYQ8N9B5 988 aa20.56■□□□□ 0.88
PCCB-212ENST00000474833 ARHGEF1Q92888 912 aaKnown RBP20.56■□□□□ 0.88
PCCB-212ENST00000474833 RTCBQ9Y3I0 505 aaKnown RBP20.56■□□□□ 0.88
PCCB-212ENST00000474833 KCPQ6ZWJ8 1503 aa20.56■□□□□ 0.88
PCCB-212ENST00000474833 CNTNAP4Q9C0A0 1308 aa20.55■□□□□ 0.88
PCCB-212ENST00000474833 ADRA2BP18089 450 aa20.55■□□□□ 0.88
PCCB-212ENST00000474833 KDM6AO15550 1401 aaPredicted RBP20.54■□□□□ 0.88
PCCB-212ENST00000474833 PPM1GO15355 546 aaPredicted RBP20.54■□□□□ 0.88
PCCB-212ENST00000474833 FCHSD2O94868 740 aa20.54■□□□□ 0.88
PCCB-212ENST00000474833 COL13A1Q5TAT6 717 aaPredicted RBP20.54■□□□□ 0.88
PCCB-212ENST00000474833 RC3H1Q5TC82 1133 aaKnown RBP20.54■□□□□ 0.88
PCCB-212ENST00000474833 C9orf131Q5VYM1 1079 aa20.54■□□□□ 0.88
PCCB-212ENST00000474833 KLRG1Q96E93 195 aa20.54■□□□□ 0.88
PCCB-212ENST00000474833 CCDC87Q9NVE4 849 aa20.53■□□□□ 0.88
PCCB-212ENST00000474833 ADAMTS7Q9UKP4 1686 aa20.53■□□□□ 0.88
PCCB-212ENST00000474833 TNRC6CQ9HCJ0 1690 aaKnown RBP20.52■□□□□ 0.88
PCCB-212ENST00000474833 DCAF5Q96JK2 942 aa20.52■□□□□ 0.88
PCCB-212ENST00000474833 POLKQ9UBT6 870 aa20.52■□□□□ 0.88
PCCB-212ENST00000474833 TJP1Q07157 1748 aa20.51■□□□□ 0.87
PCCB-212ENST00000474833 RPS6KA4O75676 772 aa20.51■□□□□ 0.87
PCCB-212ENST00000474833 FSTL1Q12841 308 aa20.5■□□□□ 0.87
PCCB-212ENST00000474833 EIF4A2Q14240 407 aaKnown RBP20.5■□□□□ 0.87
PCCB-212ENST00000474833 SBF1O95248 1867 aa20.5■□□□□ 0.87
PCCB-212ENST00000474833 ERVV-2B6SEH9 535 aa20.49■□□□□ 0.87
PCCB-212ENST00000474833 DDR1Q08345 913 aa20.49■□□□□ 0.87
PCCB-212ENST00000474833 RBM42Q9BTD8 480 aaKnown RBP20.49■□□□□ 0.87
PCCB-212ENST00000474833 PARP3Q9Y6F1 533 aa20.49■□□□□ 0.87
PCCB-212ENST00000474833 RFC4P35249 363 aa20.48■□□□□ 0.87
PCCB-212ENST00000474833 CDCA8Q53HL2 280 aa20.48■□□□□ 0.87
PCCB-212ENST00000474833 PIM2Q9P1W9 311 aa20.47■□□□□ 0.87
PCCB-212ENST00000474833 FKBP8Q14318 412 aa20.46■□□□□ 0.87
PCCB-212ENST00000474833 SRP68Q9UHB9 627 aaKnown RBP20.46■□□□□ 0.87
PCCB-212ENST00000474833 USP42Q9H9J4 1324 aaKnown RBP20.46■□□□□ 0.87
PCCB-212ENST00000474833 DALRD3Q5D0E6 543 aaKnown RBP20.45■□□□□ 0.86
PCCB-212ENST00000474833 C16orf71Q8IYS4 520 aaPredicted RBP20.45■□□□□ 0.86
PCCB-212ENST00000474833 RNF181Q9P0P0 153 aa20.45■□□□□ 0.86
PCCB-212ENST00000474833 KDM2BQ8NHM5 1336 aa20.45■□□□□ 0.86
PCCB-212ENST00000474833 CHRNA5P30532 468 aa20.44■□□□□ 0.86
PCCB-212ENST00000474833 CRKLP46109 303 aaKnown RBP20.43■□□□□ 0.86
PCCB-212ENST00000474833 RRAGCQ9HB90 399 aa20.43■□□□□ 0.86
PCCB-212ENST00000474833 CLSPNQ9HAW4 1339 aa20.43■□□□□ 0.86
PCCB-212ENST00000474833 POLRMTO00411 1230 aaKnown RBP20.41■□□□□ 0.86
PCCB-212ENST00000474833 HSP90AB1P08238 724 aaKnown RBP20.41■□□□□ 0.86
PCCB-212ENST00000474833 PRELPP51888 382 aa20.41■□□□□ 0.86
PCCB-212ENST00000474833 NRXN2Q9P2S2 1712 aa20.41■□□□□ 0.86
PCCB-212ENST00000474833 DLEC1Q9Y238 1755 aa20.41■□□□□ 0.86
PCCB-212ENST00000474833 PTCD1O75127 700 aaKnown RBP20.4■□□□□ 0.86
PCCB-212ENST00000474833 CAPN15O75808 1086 aa20.39■□□□□ 0.85
PCCB-212ENST00000474833 TM4SF1P30408 202 aa20.39■□□□□ 0.85
PCCB-212ENST00000474833 CABP4P57796 275 aa20.39■□□□□ 0.85
PCCB-212ENST00000474833 ZNF530Q6P9A1 599 aaPredicted RBP20.39■□□□□ 0.85
PCCB-212ENST00000474833 INTS5Q6P9B9 1019 aaKnown RBP20.39■□□□□ 0.85
PCCB-212ENST00000474833 AFDNP55196 1824 aaKnown RBP20.39■□□□□ 0.85
PCCB-212ENST00000474833 TIAM2Q8IVF5 1701 aa20.39■□□□□ 0.85
PCCB-212ENST00000474833 ZC3H4Q9UPT8 1303 aaKnown RBP20.38■□□□□ 0.85
PCCB-212ENST00000474833 TNNT2P45379 298 aaPredicted RBP20.38■□□□□ 0.85
PCCB-212ENST00000474833 RASSF7Q02833 373 aa20.38■□□□□ 0.85
PCCB-212ENST00000474833 AEBP1Q8IUX7 1158 aa20.38■□□□□ 0.85
PCCB-212ENST00000474833 TNS4Q8IZW8 715 aa20.38■□□□□ 0.85
PCCB-212ENST00000474833 SMC1BQ8NDV3 1235 aa20.38■□□□□ 0.85
PCCB-212ENST00000474833 SCN11AQ9UI33 1791 aa20.37■□□□□ 0.85
PCCB-212ENST00000474833 PLEKHO1Q53GL0 409 aaPredicted RBP20.37■□□□□ 0.85
PCCB-212ENST00000474833 NFATC2IPQ8NCF5 419 aa20.36■□□□□ 0.85
PCCB-212ENST00000474833 TIMELESSQ9UNS1 1208 aa20.36■□□□□ 0.85
PCCB-212ENST00000474833 SOS1Q07889 1333 aaPredicted RBP20.34■□□□□ 0.85
PCCB-212ENST00000474833 MTHFSP49914 203 aa20.34■□□□□ 0.85
PCCB-212ENST00000474833 AMOTQ4VCS5 1084 aa20.34■□□□□ 0.85
PCCB-212ENST00000474833 MRC1P22897 1456 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms