RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 TOPAZ1Q8N9V7 1692 aa17.73■□□□□ 0.43
SAMM50-203ENST00000474323 USP26Q9BXU7 913 aa17.73■□□□□ 0.43
SAMM50-203ENST00000474323 ZDHHC9Q9Y397 364 aa17.73■□□□□ 0.43
SAMM50-203ENST00000474323 NPHP4O75161 1426 aaPredicted RBP17.72■□□□□ 0.43
SAMM50-203ENST00000474323 RGPD8O14715 1765 aaPredicted RBP17.72■□□□□ 0.43
SAMM50-203ENST00000474323 ST18O60284 1047 aa17.72■□□□□ 0.43
SAMM50-203ENST00000474323 LETM1O95202 739 aaPredicted RBP17.72■□□□□ 0.43
SAMM50-203ENST00000474323 CDK11BP21127 795 aaKnown RBP17.72■□□□□ 0.43
SAMM50-203ENST00000474323 ZNF710Q8N1W2 664 aa17.72■□□□□ 0.43
SAMM50-203ENST00000474323 PIBF1Q8WXW3 757 aa17.72■□□□□ 0.43
SAMM50-203ENST00000474323 TSPY26PQ9H489 355 aa17.71■□□□□ 0.42
SAMM50-203ENST00000474323 PLEKHG3A1L390 1219 aa17.7■□□□□ 0.42
SAMM50-203ENST00000474323 GSPT1P15170 499 aaKnown RBP17.69■□□□□ 0.42
SAMM50-203ENST00000474323 RNF214Q8ND24 703 aa17.69■□□□□ 0.42
SAMM50-203ENST00000474323 ARHGAP45Q92619 1136 aa17.69■□□□□ 0.42
SAMM50-203ENST00000474323 ZGPATQ8N5A5 531 aaKnown RBP17.69■□□□□ 0.42
SAMM50-203ENST00000474323 MAP2P11137 1827 aaKnown RBP17.69■□□□□ 0.42
SAMM50-203ENST00000474323 CBX1P83916 185 aa17.68■□□□□ 0.42
SAMM50-203ENST00000474323 NOLC1Q14978 699 aaKnown RBP eCLIP17.68■□□□□ 0.42
SAMM50-203ENST00000474323 SYAP1Q96A49 352 aaPredicted RBP17.68■□□□□ 0.42
SAMM50-203ENST00000474323 NSFL1CQ9UNZ2 370 aaKnown RBP17.68■□□□□ 0.42
SAMM50-203ENST00000474323 KIF3AQ9Y496 699 aa17.68■□□□□ 0.42
SAMM50-203ENST00000474323 U2SURPO15042 1029 aaKnown RBP17.68■□□□□ 0.42
SAMM50-203ENST00000474323 INTS3Q68E01 1043 aaKnown RBP17.68■□□□□ 0.42
SAMM50-203ENST00000474323 COG3Q96JB2 828 aa17.68■□□□□ 0.42
SAMM50-203ENST00000474323 UVSSAQ2YD98 709 aa17.67■□□□□ 0.42
SAMM50-203ENST00000474323 SIRT2Q8IXJ6 389 aa17.67■□□□□ 0.42
SAMM50-203ENST00000474323 POLKQ9UBT6 870 aa17.67■□□□□ 0.42
SAMM50-203ENST00000474323 PPP4R3BQ5MIZ7 849 aa17.67■□□□□ 0.42
SAMM50-203ENST00000474323 PLEKHM2Q8IWE5 1019 aa17.67■□□□□ 0.42
SAMM50-203ENST00000474323 TTC21BQ7Z4L5 1316 aa17.67■□□□□ 0.42
SAMM50-203ENST00000474323 COL3A1P02461 1466 aaPredicted RBP17.67■□□□□ 0.42
SAMM50-203ENST00000474323 FAM184AQ8NB25 1140 aa17.66■□□□□ 0.42
SAMM50-203ENST00000474323 USP6P35125 1406 aa17.66■□□□□ 0.42
SAMM50-203ENST00000474323 NALCNQ8IZF0 1738 aa17.66■□□□□ 0.42
SAMM50-203ENST00000474323 PHF14O94880 888 aa17.66■□□□□ 0.42
SAMM50-203ENST00000474323 NGDNQ8NEJ9 315 aaKnown RBP17.66■□□□□ 0.42
SAMM50-203ENST00000474323 NRKQ7Z2Y5 1582 aa17.65■□□□□ 0.42
SAMM50-203ENST00000474323 TTC22Q5TAA0 569 aa17.65■□□□□ 0.42
SAMM50-203ENST00000474323 EMILIN1Q9Y6C2 1016 aa17.65■□□□□ 0.42
SAMM50-203ENST00000474323 C1orf115Q9H7X2 142 aa17.65■□□□□ 0.42
SAMM50-203ENST00000474323 SPTLC3Q9NUV7 552 aa17.65■□□□□ 0.42
SAMM50-203ENST00000474323 FMN2Q9NZ56 1722 aa17.64■□□□□ 0.41
SAMM50-203ENST00000474323 DIAPH1O60610 1272 aaKnown RBP17.64■□□□□ 0.41
SAMM50-203ENST00000474323 FKBP5Q13451 457 aaPredicted RBP17.64■□□□□ 0.41
SAMM50-203ENST00000474323 ATP2B3Q16720 1220 aa17.64■□□□□ 0.41
SAMM50-203ENST00000474323 CASC1Q6TDU7 716 aa17.64■□□□□ 0.41
SAMM50-203ENST00000474323 RRS1Q15050 365 aaKnown RBP17.63■□□□□ 0.41
SAMM50-203ENST00000474323 TSC1Q92574 1164 aa17.63■□□□□ 0.41
SAMM50-203ENST00000474323 JARID2Q92833 1246 aaPredicted RBP17.63■□□□□ 0.41
SAMM50-203ENST00000474323 PNPLA6Q8IY17 1366 aa17.63■□□□□ 0.41
SAMM50-203ENST00000474323 TAF3Q5VWG9 929 aa17.62■□□□□ 0.41
SAMM50-203ENST00000474323 BRD1O95696 1058 aa17.61■□□□□ 0.41
SAMM50-203ENST00000474323 HSPA2P54652 639 aa17.61■□□□□ 0.41
SAMM50-203ENST00000474323 ANKARQ7Z5J8 1434 aa17.61■□□□□ 0.41
SAMM50-203ENST00000474323 REC8O95072 547 aa17.61■□□□□ 0.41
SAMM50-203ENST00000474323 MRPL50Q8N5N7 158 aaKnown RBP17.61■□□□□ 0.41
SAMM50-203ENST00000474323 BCL2L12Q9HB09 334 aa17.61■□□□□ 0.41
SAMM50-203ENST00000474323 PDCL2Q8N4E4 241 aa17.6■□□□□ 0.41
SAMM50-203ENST00000474323 DCTPP1Q9H773 170 aa17.6■□□□□ 0.41
SAMM50-203ENST00000474323 ABCC4O15439 1325 aa17.6■□□□□ 0.41
SAMM50-203ENST00000474323 SOX12O15370 315 aa17.6■□□□□ 0.41
SAMM50-203ENST00000474323 CHAMP1Q96JM3 812 aa17.6■□□□□ 0.41
SAMM50-203ENST00000474323 SSH2Q76I76 1423 aa17.59■□□□□ 0.41
SAMM50-203ENST00000474323 MCM2P49736 904 aa17.59■□□□□ 0.41
SAMM50-203ENST00000474323 DIAPH3Q9NSV4 1193 aa17.59■□□□□ 0.41
SAMM50-203ENST00000474323 AATKQ6ZMQ8 1374 aa17.59■□□□□ 0.41
SAMM50-203ENST00000474323 ADGRL3Q9HAR2 1447 aa17.59■□□□□ 0.41
SAMM50-203ENST00000474323 VAMP4O75379 141 aa17.58■□□□□ 0.41
SAMM50-203ENST00000474323 ZNF830Q96NB3 372 aaPredicted RBP17.58■□□□□ 0.41
SAMM50-203ENST00000474323 OVOS2A0A0J9YW53 1432 aa17.58■□□□□ 0.4
SAMM50-203ENST00000474323 OVOS2Q6IE36 1432 aa17.58■□□□□ 0.4
SAMM50-203ENST00000474323 KDM4FA0A1W2PPD8 638 aa17.58■□□□□ 0.4
SAMM50-203ENST00000474323 ANKRD7Q92527 254 aa17.57■□□□□ 0.4
SAMM50-203ENST00000474323 FEZ1Q99689 392 aa17.57■□□□□ 0.4
SAMM50-203ENST00000474323 TTC12Q9H892 705 aaPredicted RBP17.57■□□□□ 0.4
SAMM50-203ENST00000474323 KIF24Q5T7B8 1368 aa17.57■□□□□ 0.4
SAMM50-203ENST00000474323 ZBTB7CA1YPR0 619 aa17.57■□□□□ 0.4
SAMM50-203ENST00000474323 TMX3Q96JJ7 454 aa17.57■□□□□ 0.4
SAMM50-203ENST00000474323 TTC21AQ8NDW8 1320 aa17.56■□□□□ 0.4
SAMM50-203ENST00000474323 ADCY5O95622 1261 aa17.56■□□□□ 0.4
SAMM50-203ENST00000474323 SDSP20132 328 aa17.56■□□□□ 0.4
SAMM50-203ENST00000474323 CHAF1AQ13111 956 aaPredicted RBP17.56■□□□□ 0.4
SAMM50-203ENST00000474323 PROSER2Q86WR7 435 aaPredicted RBP17.56■□□□□ 0.4
SAMM50-203ENST00000474323 BBXQ8WY36 941 aaPredicted RBP17.56■□□□□ 0.4
SAMM50-203ENST00000474323 USP25Q9UHP3 1055 aa17.56■□□□□ 0.4
SAMM50-203ENST00000474323 CDK12Q9NYV4 1490 aaPredicted RBP17.56■□□□□ 0.4
SAMM50-203ENST00000474323 CUL4AQ13619 759 aa17.55■□□□□ 0.4
SAMM50-203ENST00000474323 FOXD4L5Q5VV16 416 aaPredicted RBP17.55■□□□□ 0.4
SAMM50-203ENST00000474323 FOXD4L4Q8WXT5 416 aaPredicted RBP17.55■□□□□ 0.4
SAMM50-203ENST00000474323 INTS4Q96HW7 963 aaKnown RBP17.55■□□□□ 0.4
SAMM50-203ENST00000474323 NWD1Q149M9 1564 aa17.55■□□□□ 0.4
SAMM50-203ENST00000474323 IGSF3O75054 1194 aa17.55■□□□□ 0.4
SAMM50-203ENST00000474323 PHF8Q9UPP1 1060 aa17.55■□□□□ 0.4
SAMM50-203ENST00000474323 ERC2O15083 957 aa17.54■□□□□ 0.4
SAMM50-203ENST00000474323 ESCO1Q5FWF5 840 aa17.54■□□□□ 0.4
SAMM50-203ENST00000474323 SPDYE4A6NLX3 237 aa17.54■□□□□ 0.4
SAMM50-203ENST00000474323 HMOX1P09601 288 aa17.54■□□□□ 0.4
SAMM50-203ENST00000474323 NUTM2GQ5VZR2 741 aa17.54■□□□□ 0.4
SAMM50-203ENST00000474323 API5Q9BZZ5 524 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms