RNA–Protein interactions for RNA: ENST00000473633.1

AGAP3-212, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 1 (best)

Gene AGAP3, Length 3,751 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-212ENST00000473633 TAF3Q5VWG9 929 aa11.51□□□□□ -0.57
AGAP3-212ENST00000473633 TNPO1Q92973 898 aaKnown RBP11.51□□□□□ -0.57
AGAP3-212ENST00000473633 DTNBO60941 627 aa11.51□□□□□ -0.57
AGAP3-212ENST00000473633 VAMP4O75379 141 aa11.51□□□□□ -0.57
AGAP3-212ENST00000473633 NUCB2P80303 420 aa11.51□□□□□ -0.57
AGAP3-212ENST00000473633 PHF23Q9BUL5 403 aaPredicted RBP11.51□□□□□ -0.57
AGAP3-212ENST00000473633 USP6P35125 1406 aa11.5□□□□□ -0.57
AGAP3-212ENST00000473633 CDC45O75419 566 aa11.5□□□□□ -0.57
AGAP3-212ENST00000473633 TNNT3P45378 269 aaPredicted RBP11.5□□□□□ -0.57
AGAP3-212ENST00000473633 TEFQ10587 303 aa11.5□□□□□ -0.57
AGAP3-212ENST00000473633 MPNDQ8N594 471 aa11.5□□□□□ -0.57
AGAP3-212ENST00000473633 MEIS3Q99687 375 aa11.5□□□□□ -0.57
AGAP3-212ENST00000473633 IL1RAPL2Q9NP60 686 aa11.5□□□□□ -0.57
AGAP3-212ENST00000473633 ANXA1P04083 346 aa11.5□□□□□ -0.57
AGAP3-212ENST00000473633 SSFA2P28290 1259 aa11.49□□□□□ -0.57
AGAP3-212ENST00000473633 NBPF6Q5VWK0 638 aa11.49□□□□□ -0.57
AGAP3-212ENST00000473633 ZNF530Q6P9A1 599 aaPredicted RBP11.49□□□□□ -0.57
AGAP3-212ENST00000473633 NBPF4Q96M43 638 aa11.49□□□□□ -0.57
AGAP3-212ENST00000473633 ZNF330Q9Y3S2 320 aaPredicted RBP11.49□□□□□ -0.57
AGAP3-212ENST00000473633 RIMS1Q86UR5 1692 aaKnown RBP11.49□□□□□ -0.57
AGAP3-212ENST00000473633 CPSF1Q10570 1443 aaKnown RBP11.49□□□□□ -0.57
AGAP3-212ENST00000473633 TTC21AQ8NDW8 1320 aa11.49□□□□□ -0.57
AGAP3-212ENST00000473633 CT47B1P0C2W7 299 aaPredicted RBP11.49□□□□□ -0.57
AGAP3-212ENST00000473633 ATP7BP35670 1465 aa11.49□□□□□ -0.57
AGAP3-212ENST00000473633 HMMRO75330 724 aa11.48□□□□□ -0.57
AGAP3-212ENST00000473633 MCCP23508 829 aa11.48□□□□□ -0.57
AGAP3-212ENST00000473633 NUCB1Q02818 461 aa11.48□□□□□ -0.57
AGAP3-212ENST00000473633 C1orf141Q5JVX7 400 aa11.48□□□□□ -0.57
AGAP3-212ENST00000473633 RNF214Q8ND24 703 aa11.48□□□□□ -0.57
AGAP3-212ENST00000473633 LARP6Q9BRS8 491 aaKnown RBP11.48□□□□□ -0.57
AGAP3-212ENST00000473633 NPHP4O75161 1426 aaPredicted RBP11.48□□□□□ -0.57
AGAP3-212ENST00000473633 PHF14O94880 888 aa11.48□□□□□ -0.57
AGAP3-212ENST00000473633 MCM5P33992 734 aa11.48□□□□□ -0.57
AGAP3-212ENST00000473633 HDAC1Q13547 482 aaPredicted RBP11.48□□□□□ -0.57
AGAP3-212ENST00000473633 SMC5Q8IY18 1101 aa11.48□□□□□ -0.57
AGAP3-212ENST00000473633 MRPL50Q8N5N7 158 aaKnown RBP11.48□□□□□ -0.57
AGAP3-212ENST00000473633 CCDC94Q9BW85 323 aaPredicted RBP11.48□□□□□ -0.57
AGAP3-212ENST00000473633 DIAPH3Q9NSV4 1193 aa11.48□□□□□ -0.57
AGAP3-212ENST00000473633 KAT6BQ8WYB5 2073 aa11.48□□□□□ -0.57
AGAP3-212ENST00000473633 GCC1Q96CN9 775 aa11.47□□□□□ -0.57
AGAP3-212ENST00000473633 ZFP91Q96JP5 570 aaPredicted RBP11.47□□□□□ -0.57
AGAP3-212ENST00000473633 TMEM94Q12767 1356 aa11.47□□□□□ -0.57
AGAP3-212ENST00000473633 ST18O60284 1047 aa11.47□□□□□ -0.57
AGAP3-212ENST00000473633 ANTXR1Q9H6X2 564 aa11.47□□□□□ -0.57
AGAP3-212ENST00000473633 FER1L4A9Z1Z3 1794 aa11.47□□□□□ -0.57
AGAP3-212ENST00000473633 IQSEC2Q5JU85 1478 aa11.47□□□□□ -0.57
AGAP3-212ENST00000473633 CCDC66A2RUB6 948 aa11.47□□□□□ -0.57
AGAP3-212ENST00000473633 GOLGA6L4A6NEF3 574 aa11.47□□□□□ -0.57
AGAP3-212ENST00000473633 NEK4P51957 841 aa11.47□□□□□ -0.57
AGAP3-212ENST00000473633 HS1BP3Q53T59 392 aa11.47□□□□□ -0.57
AGAP3-212ENST00000473633 GAS2L2Q8NHY3 880 aa11.47□□□□□ -0.57
AGAP3-212ENST00000473633 ANKRD24Q8TF21 1146 aa11.47□□□□□ -0.57
AGAP3-212ENST00000473633 GTPBP4Q9BZE4 634 aaKnown RBP11.47□□□□□ -0.57
AGAP3-212ENST00000473633 LGR6Q9HBX8 967 aa11.47□□□□□ -0.57
AGAP3-212ENST00000473633 ZNF335Q9H4Z2 1342 aaPredicted RBP11.47□□□□□ -0.57
AGAP3-212ENST00000473633 GNAT3A8MTJ3 354 aa11.46□□□□□ -0.57
AGAP3-212ENST00000473633 LETM1O95202 739 aaPredicted RBP11.46□□□□□ -0.57
AGAP3-212ENST00000473633 RAPGEF4Q8WZA2 1011 aa11.46□□□□□ -0.57
AGAP3-212ENST00000473633 UPF3BQ9BZI7 483 aaKnown RBP11.46□□□□□ -0.57
AGAP3-212ENST00000473633 AIMP1Q12904 312 aaKnown RBP11.46□□□□□ -0.57
AGAP3-212ENST00000473633 ALDH1L2Q3SY69 923 aa11.46□□□□□ -0.57
AGAP3-212ENST00000473633 CHAMP1Q96JM3 812 aa11.46□□□□□ -0.57
AGAP3-212ENST00000473633 IFT57Q9NWB7 429 aa11.46□□□□□ -0.57
AGAP3-212ENST00000473633 FLT4P35916 1363 aa11.46□□□□□ -0.57
AGAP3-212ENST00000473633 MYO3AQ8NEV4 1616 aa11.46□□□□□ -0.58
AGAP3-212ENST00000473633 SHPRHQ149N8 1683 aa11.46□□□□□ -0.58
AGAP3-212ENST00000473633 K7ELQ4 463 aaPredicted RBP11.46□□□□□ -0.58
AGAP3-212ENST00000473633 EVA1CP58658 441 aa11.46□□□□□ -0.58
AGAP3-212ENST00000473633 DDX54Q8TDD1 881 aaKnown RBP11.46□□□□□ -0.58
AGAP3-212ENST00000473633 PRDM11Q9NQV5 511 aa11.46□□□□□ -0.58
AGAP3-212ENST00000473633 KIF3AQ9Y496 699 aa11.46□□□□□ -0.58
AGAP3-212ENST00000473633 ERBB4Q15303 1308 aa11.45□□□□□ -0.58
AGAP3-212ENST00000473633 ZBTB7BO15156 539 aaPredicted RBP11.45□□□□□ -0.58
AGAP3-212ENST00000473633 CD2BP2O95400 341 aaKnown RBP11.45□□□□□ -0.58
AGAP3-212ENST00000473633 PIP4K2BP78356 416 aa11.45□□□□□ -0.58
AGAP3-212ENST00000473633 C3P01024 1663 aa11.45□□□□□ -0.58
AGAP3-212ENST00000473633 KIF20AO95235 890 aa11.45□□□□□ -0.58
AGAP3-212ENST00000473633 INTS3Q68E01 1043 aaKnown RBP11.45□□□□□ -0.58
AGAP3-212ENST00000473633 G2E3Q7L622 706 aa11.45□□□□□ -0.58
AGAP3-212ENST00000473633 KCNH5Q8NCM2 988 aa11.45□□□□□ -0.58
AGAP3-212ENST00000473633 CNKSR2Q8WXI2 1034 aa11.45□□□□□ -0.58
AGAP3-212ENST00000473633 CGNQ9P2M7 1197 aaKnown RBP11.45□□□□□ -0.58
AGAP3-212ENST00000473633 AXIN2Q9Y2T1 843 aa11.45□□□□□ -0.58
AGAP3-212ENST00000473633 UBR1Q8IWV7 1749 aa11.44□□□□□ -0.58
AGAP3-212ENST00000473633 KLHL40Q2TBA0 621 aa11.44□□□□□ -0.58
AGAP3-212ENST00000473633 PDCL2Q8N4E4 241 aa11.44□□□□□ -0.58
AGAP3-212ENST00000473633 ZKSCAN5Q9Y2L8 839 aa11.44□□□□□ -0.58
AGAP3-212ENST00000473633 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.44□□□□□ -0.58
AGAP3-212ENST00000473633 GOLGA6L6A8MZA4 724 aa11.44□□□□□ -0.58
AGAP3-212ENST00000473633 PRPF40AO75400 957 aaKnown RBP11.44□□□□□ -0.58
AGAP3-212ENST00000473633 PIP4K2AP48426 406 aaPredicted RBP11.44□□□□□ -0.58
AGAP3-212ENST00000473633 CADPS2Q86UW7 1296 aa11.44□□□□□ -0.58
AGAP3-212ENST00000473633 CHMP3Q9Y3E7 222 aa11.44□□□□□ -0.58
AGAP3-212ENST00000473633 DRC7Q8IY82 874 aa11.44□□□□□ -0.58
AGAP3-212ENST00000473633 SLC39A6Q13433 755 aa11.43□□□□□ -0.58
AGAP3-212ENST00000473633 TOM1L2Q6ZVM7 507 aa11.43□□□□□ -0.58
AGAP3-212ENST00000473633 NUTM1Q86Y26 1132 aa11.43□□□□□ -0.58
AGAP3-212ENST00000473633 IGSF3O75054 1194 aa11.43□□□□□ -0.58
AGAP3-212ENST00000473633 SURF6O75683 361 aaKnown RBP11.43□□□□□ -0.58
AGAP3-212ENST00000473633 BMP2KLQ5H9B9 411 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms