RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 SLC52A2Q9HAB3 445 aa35.26■■■■□ 3.23
HOXB3-207ENST00000472863 SPATA31A1Q5TZJ5 1347 aa35.25■■■■□ 3.23
HOXB3-207ENST00000472863 LRP6O75581 1613 aa35.25■■■■□ 3.23
HOXB3-207ENST00000472863 BRPF1P55201 1214 aaPredicted RBP35.25■■■■□ 3.23
HOXB3-207ENST00000472863 NFATC2IPQ8NCF5 419 aa35.25■■■■□ 3.23
HOXB3-207ENST00000472863 CLUAP1Q96AJ1 413 aa35.25■■■■□ 3.23
HOXB3-207ENST00000472863 DISP2A7MBM2 1401 aa35.24■■■■□ 3.23
HOXB3-207ENST00000472863 B4GALNT3Q6L9W6 998 aa35.24■■■■□ 3.23
HOXB3-207ENST00000472863 NWD2Q9ULI1 1742 aa35.24■■■■□ 3.23
HOXB3-207ENST00000472863 SHANK3Q9BYB0 1731 aa35.24■■■■□ 3.23
HOXB3-207ENST00000472863 RLBP1P12271 317 aa35.24■■■■□ 3.23
HOXB3-207ENST00000472863 EIF4A1P60842 406 aaKnown RBP35.24■■■■□ 3.23
HOXB3-207ENST00000472863 SIPA1L3O60292 1781 aaPredicted RBP35.24■■■■□ 3.23
HOXB3-207ENST00000472863 KDM3BQ7LBC6 1761 aa35.23■■■■□ 3.23
HOXB3-207ENST00000472863 KIF16BQ96L93 1317 aa35.22■■■■□ 3.23
HOXB3-207ENST00000472863 TRIM27P14373 513 aa35.21■■■■□ 3.23
HOXB3-207ENST00000472863 UNC5CLQ8IV45 518 aa35.21■■■■□ 3.23
HOXB3-207ENST00000472863 NKX1-1Q15270 411 aaPredicted RBP35.2■■■■□ 3.23
HOXB3-207ENST00000472863 CCDC9Q9Y3X0 531 aaKnown RBP35.2■■■■□ 3.23
HOXB3-207ENST00000472863 SPATA31A5Q5VU36 1347 aa35.2■■■■□ 3.23
HOXB3-207ENST00000472863 SPATA31A7Q8IWB4 1347 aa35.2■■■■□ 3.23
HOXB3-207ENST00000472863 ATF7IPQ6VMQ6 1270 aa35.2■■■■□ 3.22
HOXB3-207ENST00000472863 COG6Q9Y2V7 657 aa35.2■■■■□ 3.22
HOXB3-207ENST00000472863 IPO8O15397 1037 aaKnown RBP35.18■■■■□ 3.22
HOXB3-207ENST00000472863 BCL9LQ86UU0 1499 aa35.18■■■■□ 3.22
HOXB3-207ENST00000472863 CABP4P57796 275 aa35.17■■■■□ 3.22
HOXB3-207ENST00000472863 SLC39A6Q13433 755 aa35.17■■■■□ 3.22
HOXB3-207ENST00000472863 FNBP4Q8N3X1 1017 aaPredicted RBP35.17■■■■□ 3.22
HOXB3-207ENST00000472863 THRAP3Q9Y2W1 955 aaKnown RBP35.17■■■■□ 3.22
HOXB3-207ENST00000472863 DZIP1LQ8IYY4 767 aaKnown RBP35.16■■■■□ 3.22
HOXB3-207ENST00000472863 EXOC5O00471 708 aa35.15■■■■□ 3.22
HOXB3-207ENST00000472863 FTSJ3Q8IY81 847 aaKnown RBP35.14■■■■□ 3.22
HOXB3-207ENST00000472863 NECTIN2Q92692 538 aa35.14■■■■□ 3.22
HOXB3-207ENST00000472863 MRC1P22897 1456 aa35.14■■■■□ 3.22
HOXB3-207ENST00000472863 SLC4A2P04920 1241 aa35.13■■■■□ 3.21
HOXB3-207ENST00000472863 ZNF790Q6PG37 636 aa35.13■■■■□ 3.21
HOXB3-207ENST00000472863 CCDC136Q96JN2 1154 aa35.13■■■■□ 3.21
HOXB3-207ENST00000472863 SOS1Q07889 1333 aaPredicted RBP35.12■■■■□ 3.21
HOXB3-207ENST00000472863 WNK3Q9BYP7 1800 aa35.12■■■■□ 3.21
HOXB3-207ENST00000472863 ARHGAP45Q92619 1136 aa35.12■■■■□ 3.21
HOXB3-207ENST00000472863 ERVV-2B6SEH9 535 aa35.11■■■■□ 3.21
HOXB3-207ENST00000472863 MS4A1P11836 297 aa35.11■■■■□ 3.21
HOXB3-207ENST00000472863 MEX3CQ5U5Q3 659 aaKnown RBP35.11■■■■□ 3.21
HOXB3-207ENST00000472863 CDCA7Q9BWT1 371 aaPredicted RBP35.11■■■■□ 3.21
HOXB3-207ENST00000472863 USP21Q9UK80 565 aa35.1■■■■□ 3.21
HOXB3-207ENST00000472863 VPS72Q15906 364 aa35.1■■■■□ 3.21
HOXB3-207ENST00000472863 CCDC30Q5VVM6 783 aa35.1■■■■□ 3.21
HOXB3-207ENST00000472863 BARGINQ6ZT62 677 aa35.08■■■■□ 3.21
HOXB3-207ENST00000472863 HEG1Q9ULI3 1381 aa35.08■■■■□ 3.21
HOXB3-207ENST00000472863 GIGYF1O75420 1035 aaPredicted RBP35.08■■■■□ 3.21
HOXB3-207ENST00000472863 EIF2S2P20042 333 aaKnown RBP35.07■■■■□ 3.2
HOXB3-207ENST00000472863 HDGFL1Q5TGJ6 251 aa35.07■■■■□ 3.2
HOXB3-207ENST00000472863 HOXB7P09629 217 aa35.06■■■■□ 3.2
HOXB3-207ENST00000472863 MVPQ14764 893 aaKnown RBP35.06■■■■□ 3.2
HOXB3-207ENST00000472863 STK31Q9BXU1 1019 aa35.06■■■■□ 3.2
HOXB3-207ENST00000472863 PRAMEF22A3QJZ6 481 aa35.06■■■■□ 3.2
HOXB3-207ENST00000472863 G2E3Q7L622 706 aa35.06■■■■□ 3.2
HOXB3-207ENST00000472863 DDB1Q16531 1140 aa35.05■■■■□ 3.2
HOXB3-207ENST00000472863 TMEM57Q8N5G2 664 aa35.05■■■■□ 3.2
HOXB3-207ENST00000472863 TNS2Q63HR2 1409 aa35.04■■■■□ 3.2
HOXB3-207ENST00000472863 ZNF496Q96IT1 587 aaPredicted RBP35.03■■■■□ 3.2
HOXB3-207ENST00000472863 FAM98CQ17RN3 349 aaKnown RBP35.02■■■■□ 3.2
HOXB3-207ENST00000472863 TTC5Q8N0Z6 440 aa35.02■■■■□ 3.2
HOXB3-207ENST00000472863 API5Q9BZZ5 524 aaKnown RBP35.02■■■■□ 3.2
HOXB3-207ENST00000472863 TOGARAM1Q9Y4F4 1720 aa35.02■■■■□ 3.2
HOXB3-207ENST00000472863 ITPRIPQ8IWB1 547 aa35.01■■■■□ 3.2
HOXB3-207ENST00000472863 AFF2P51816 1311 aa34.99■■■■□ 3.19
HOXB3-207ENST00000472863 PTPRCP08575 1304 aa34.98■■■■□ 3.19
HOXB3-207ENST00000472863 ABCC4O15439 1325 aa34.98■■■■□ 3.19
HOXB3-207ENST00000472863 TMOD3Q9NYL9 352 aa34.97■■■■□ 3.19
HOXB3-207ENST00000472863 CHPF2Q9P2E5 772 aa34.97■■■■□ 3.19
HOXB3-207ENST00000472863 RGS12O14924 1447 aa34.96■■■■□ 3.19
HOXB3-207ENST00000472863 FMNL2Q96PY5 1086 aa34.96■■■■□ 3.19
HOXB3-207ENST00000472863 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.95■■■■□ 3.19
HOXB3-207ENST00000472863 MARCH10Q8NA82 808 aaPredicted RBP34.95■■■■□ 3.19
HOXB3-207ENST00000472863 FLIIQ13045 1269 aa34.94■■■■□ 3.18
HOXB3-207ENST00000472863 PIGBQ92521 554 aa34.94■■■■□ 3.18
HOXB3-207ENST00000472863 CHMP4AQ9BY43 222 aa34.94■■■■□ 3.18
HOXB3-207ENST00000472863 KAT6BQ8WYB5 2073 aa34.94■■■■□ 3.18
HOXB3-207ENST00000472863 DDX19BQ9UMR2 479 aa34.94■■■■□ 3.18
HOXB3-207ENST00000472863 CACNA1FO60840 1977 aa34.94■■■■□ 3.18
HOXB3-207ENST00000472863 PHAXQ9H814 394 aaKnown RBP34.93■■■■□ 3.18
HOXB3-207ENST00000472863 ANXA1P04083 346 aa34.93■■■■□ 3.18
HOXB3-207ENST00000472863 SNRPA1P09661 255 aaKnown RBP34.92■■■■□ 3.18
HOXB3-207ENST00000472863 USP16Q9Y5T5 823 aa34.91■■■■□ 3.18
HOXB3-207ENST00000472863 ITGB4P16144 1822 aa34.9■■■■□ 3.18
HOXB3-207ENST00000472863 C5P01031 1676 aa34.9■■■■□ 3.18
HOXB3-207ENST00000472863 DBF4Q9UBU7 674 aaPredicted RBP34.9■■■■□ 3.18
HOXB3-207ENST00000472863 F6X3S4 739 aa34.89■■■■□ 3.18
HOXB3-207ENST00000472863 FKBP5Q13451 457 aaPredicted RBP34.89■■■■□ 3.18
HOXB3-207ENST00000472863 PTCD1O75127 700 aaKnown RBP34.89■■■■□ 3.18
HOXB3-207ENST00000472863 AAMPQ13685 434 aa34.89■■■■□ 3.18
HOXB3-207ENST00000472863 PROSER3Q2NL68 480 aa34.89■■■■□ 3.18
HOXB3-207ENST00000472863 SYTL4Q96C24 671 aaPredicted RBP34.89■■■■□ 3.18
HOXB3-207ENST00000472863 GJD4Q96KN9 370 aaPredicted RBP34.89■■■■□ 3.18
HOXB3-207ENST00000472863 ASAP1Q9ULH1 1129 aa34.89■■■■□ 3.18
HOXB3-207ENST00000472863 PRIM1P49642 420 aaKnown RBP34.88■■■■□ 3.17
HOXB3-207ENST00000472863 A0A0G2JS52 829 aa34.87■■■■□ 3.17
HOXB3-207ENST00000472863 MYT1Q01538 1121 aa34.87■■■■□ 3.17
HOXB3-207ENST00000472863 PAPPAQ13219 1627 aa34.87■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms