RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 TEFQ10587 303 aa26.3■■□□□ 1.8
SF1-213ENST00000472725 NFATC2IPQ8NCF5 419 aa26.3■■□□□ 1.8
SF1-213ENST00000472725 CAMKK2Q96RR4 588 aa26.3■■□□□ 1.8
SF1-213ENST00000472725 SIPA1L3O60292 1781 aaPredicted RBP26.29■■□□□ 1.8
SF1-213ENST00000472725 LY75O60449 1722 aa26.28■■□□□ 1.8
SF1-213ENST00000472725 APAF1O14727 1248 aa26.28■■□□□ 1.8
SF1-213ENST00000472725 EN1Q05925 392 aaPredicted RBP26.28■■□□□ 1.8
SF1-213ENST00000472725 DEFB132Q7Z7B7 95 aa26.28■■□□□ 1.8
SF1-213ENST00000472725 NGEFQ8N5V2 710 aa26.28■■□□□ 1.8
SF1-213ENST00000472725 MCM10Q7L590 875 aa26.26■■□□□ 1.79
SF1-213ENST00000472725 RREB1Q92766 1687 aa26.25■■□□□ 1.79
SF1-213ENST00000472725 SLC27A3Q5K4L6 730 aa26.25■■□□□ 1.79
SF1-213ENST00000472725 PALLDQ8WX93 1383 aa26.24■■□□□ 1.79
SF1-213ENST00000472725 ATG3Q9NT62 314 aa26.24■■□□□ 1.79
SF1-213ENST00000472725 ZNF831Q5JPB2 1677 aa26.23■■□□□ 1.79
SF1-213ENST00000472725 EZH2Q15910 746 aaKnown RBP26.23■■□□□ 1.79
SF1-213ENST00000472725 CCDC27Q2M243 656 aa26.23■■□□□ 1.79
SF1-213ENST00000472725 RRP7AQ9Y3A4 280 aaKnown RBP26.23■■□□□ 1.79
SF1-213ENST00000472725 PAPPAQ13219 1627 aa26.23■■□□□ 1.79
SF1-213ENST00000472725 DCTN1Q14203 1278 aa26.22■■□□□ 1.79
SF1-213ENST00000472725 TAF7Q15545 349 aaPredicted RBP26.22■■□□□ 1.79
SF1-213ENST00000472725 NEUROD2Q15784 382 aa26.22■■□□□ 1.79
SF1-213ENST00000472725 TXNRD1Q16881 649 aa26.22■■□□□ 1.79
SF1-213ENST00000472725 ASAP1Q9ULH1 1129 aa26.22■■□□□ 1.79
SF1-213ENST00000472725 TRIM35Q9UPQ4 493 aa26.22■■□□□ 1.79
SF1-213ENST00000472725 BABAM1Q9NWV8 329 aa26.21■■□□□ 1.79
SF1-213ENST00000472725 CALD1Q05682 793 aaKnown RBP26.2■■□□□ 1.78
SF1-213ENST00000472725 PROM2Q8N271 834 aa26.2■■□□□ 1.78
SF1-213ENST00000472725 BTBD11A6QL63 1104 aa26.18■■□□□ 1.78
SF1-213ENST00000472725 UBR2Q8IWV8 1755 aa26.18■■□□□ 1.78
SF1-213ENST00000472725 NUP188Q5SRE5 1749 aa26.17■■□□□ 1.78
SF1-213ENST00000472725 LOC102724428A0A0B4J2F2 783 aa26.17■■□□□ 1.78
SF1-213ENST00000472725 SIK1P57059 783 aa26.17■■□□□ 1.78
SF1-213ENST00000472725 ZNF790Q6PG37 636 aa26.17■■□□□ 1.78
SF1-213ENST00000472725 TTC5Q8N0Z6 440 aa26.17■■□□□ 1.78
SF1-213ENST00000472725 CCNL1Q9UK58 526 aaPredicted RBP26.17■■□□□ 1.78
SF1-213ENST00000472725 CICQ96RK0 1608 aaPredicted RBP26.16■■□□□ 1.78
SF1-213ENST00000472725 VSIG10Q8N0Z9 540 aa26.14■■□□□ 1.78
SF1-213ENST00000472725 THUMPD2Q9BTF0 503 aaKnown RBP26.14■■□□□ 1.78
SF1-213ENST00000472725 KDM3BQ7LBC6 1761 aa26.13■■□□□ 1.77
SF1-213ENST00000472725 SLC39A6Q13433 755 aa26.13■■□□□ 1.77
SF1-213ENST00000472725 KCPQ6ZWJ8 1503 aa26.13■■□□□ 1.77
SF1-213ENST00000472725 TAF1LQ8IZX4 1826 aa26.12■■□□□ 1.77
SF1-213ENST00000472725 NBPF14Q5TI25 921 aa26.12■■□□□ 1.77
SF1-213ENST00000472725 WWC1Q8IX03 1113 aa26.12■■□□□ 1.77
SF1-213ENST00000472725 RBM42Q9BTD8 480 aaKnown RBP26.12■■□□□ 1.77
SF1-213ENST00000472725 LRRC4BQ9NT99 713 aa26.12■■□□□ 1.77
SF1-213ENST00000472725 ATP6V1AP38606 617 aa26.11■■□□□ 1.77
SF1-213ENST00000472725 C5P01031 1676 aa26.11■■□□□ 1.77
SF1-213ENST00000472725 PTCD1O75127 700 aaKnown RBP26.1■■□□□ 1.77
SF1-213ENST00000472725 CFAP44Q96MT7 982 aa26.1■■□□□ 1.77
SF1-213ENST00000472725 FMNL2Q96PY5 1086 aa26.1■■□□□ 1.77
SF1-213ENST00000472725 IL16Q14005 1332 aa26.09■■□□□ 1.77
SF1-213ENST00000472725 CHL1O00533 1208 aa26.08■■□□□ 1.77
SF1-213ENST00000472725 GNAI1P63096 354 aa26.08■■□□□ 1.77
SF1-213ENST00000472725 WDR63Q8IWG1 891 aa26.08■■□□□ 1.77
SF1-213ENST00000472725 TEX13AQ9BXU3 409 aaPredicted RBP26.08■■□□□ 1.77
SF1-213ENST00000472725 IFT57Q9NWB7 429 aa26.08■■□□□ 1.77
SF1-213ENST00000472725 HEG1Q9ULI3 1381 aa26.07■■□□□ 1.76
SF1-213ENST00000472725 ZNF496Q96IT1 587 aaPredicted RBP26.07■■□□□ 1.76
SF1-213ENST00000472725 SLC4A9Q96Q91 983 aa26.07■■□□□ 1.76
SF1-213ENST00000472725 TSPYL4Q9UJ04 414 aa26.07■■□□□ 1.76
SF1-213ENST00000472725 COL5A3P25940 1745 aaPredicted RBP26.06■■□□□ 1.76
SF1-213ENST00000472725 ZNF853P0CG23 659 aa26.06■■□□□ 1.76
SF1-213ENST00000472725 TJP1Q07157 1748 aa26.05■■□□□ 1.76
SF1-213ENST00000472725 STK32BQ9NY57 414 aa26.05■■□□□ 1.76
SF1-213ENST00000472725 ITPK1Q13572 414 aa26.04■■□□□ 1.76
SF1-213ENST00000472725 MIS18AQ9NYP9 233 aa26.04■■□□□ 1.76
SF1-213ENST00000472725 C4BP0C0L5 1744 aa26.04■■□□□ 1.76
SF1-213ENST00000472725 KCNQ3O43525 872 aa26.03■■□□□ 1.76
SF1-213ENST00000472725 RC3H1Q5TC82 1133 aaKnown RBP26.03■■□□□ 1.76
SF1-213ENST00000472725 AKT1S1Q96B36 256 aa26.03■■□□□ 1.76
SF1-213ENST00000472725 SNRPA1P09661 255 aaKnown RBP26.02■■□□□ 1.76
SF1-213ENST00000472725 KCNQ4P56696 695 aa26.02■■□□□ 1.76
SF1-213ENST00000472725 EIF4A1P60842 406 aaKnown RBP26.02■■□□□ 1.76
SF1-213ENST00000472725 SLC15A2Q16348 729 aa26.02■■□□□ 1.76
SF1-213ENST00000472725 CNTNAP4Q9C0A0 1308 aa26.02■■□□□ 1.76
SF1-213ENST00000472725 QSER1Q2KHR3 1735 aa26.02■■□□□ 1.76
SF1-213ENST00000472725 LINC00116Q8NCU8 138 aa26.01■■□□□ 1.75
SF1-213ENST00000472725 ZNF521Q96K83 1311 aa26.01■■□□□ 1.75
SF1-213ENST00000472725 LAS1LQ9Y4W2 734 aaKnown RBP26.01■■□□□ 1.75
SF1-213ENST00000472725 STARD3NLO95772 234 aa26■■□□□ 1.75
SF1-213ENST00000472725 SALL2Q9Y467 1007 aaPredicted RBP26■■□□□ 1.75
SF1-213ENST00000472725 DNAJC10Q8IXB1 793 aa25.99■■□□□ 1.75
SF1-213ENST00000472725 ANO8Q9HCE9 1232 aaPredicted RBP25.99■■□□□ 1.75
SF1-213ENST00000472725 AK7Q96M32 723 aa25.98■■□□□ 1.75
SF1-213ENST00000472725 MBIPQ9NS73 344 aa25.98■■□□□ 1.75
SF1-213ENST00000472725 GIGYF1O75420 1035 aaPredicted RBP25.97■■□□□ 1.75
SF1-213ENST00000472725 CYP19A1P11511 503 aaPredicted RBP25.97■■□□□ 1.75
SF1-213ENST00000472725 FLAD1Q8NFF5 587 aa25.97■■□□□ 1.75
SF1-213ENST00000472725 LAMB4A4D0S4 1761 aa25.97■■□□□ 1.75
SF1-213ENST00000472725 SENP3-EIF4A1A0A087X0R7 540 aa25.96■■□□□ 1.75
SF1-213ENST00000472725 HOXB7P09629 217 aa25.96■■□□□ 1.75
SF1-213ENST00000472725 ZNF827Q17R98 1081 aa25.96■■□□□ 1.75
SF1-213ENST00000472725 SOS1Q07889 1333 aaPredicted RBP25.95■■□□□ 1.75
SF1-213ENST00000472725 CRKLP46109 303 aaKnown RBP25.95■■□□□ 1.74
SF1-213ENST00000472725 TFCP2L1Q9NZI6 479 aa25.95■■□□□ 1.74
SF1-213ENST00000472725 UBR3Q6ZT12 1888 aa25.95■■□□□ 1.74
SF1-213ENST00000472725 MYH14Q7Z406 1995 aaKnown RBP25.95■■□□□ 1.74
SF1-213ENST00000472725 MYH16Q9H6N6 1097 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms