RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 TRAPPC3LQ5T215 181 aa26.45■■□□□ 1.82
NCKIPSD-209ENST00000470006 C16orf71Q8IYS4 520 aaPredicted RBP26.45■■□□□ 1.82
NCKIPSD-209ENST00000470006 NMRK2Q9NPI5 230 aa26.45■■□□□ 1.82
NCKIPSD-209ENST00000470006 CICQ96RK0 1608 aaPredicted RBP26.45■■□□□ 1.82
NCKIPSD-209ENST00000470006 FCHSD2O94868 740 aa26.44■■□□□ 1.82
NCKIPSD-209ENST00000470006 RTCBQ9Y3I0 505 aaKnown RBP26.43■■□□□ 1.82
NCKIPSD-209ENST00000470006 NLGN1Q8N2Q7 840 aa26.42■■□□□ 1.82
NCKIPSD-209ENST00000470006 CCDC87Q9NVE4 849 aa26.42■■□□□ 1.82
NCKIPSD-209ENST00000470006 IFNL2Q8IZJ0 200 aa26.41■■□□□ 1.82
NCKIPSD-209ENST00000470006 DPEP1P16444 411 aa26.4■■□□□ 1.82
NCKIPSD-209ENST00000470006 ATG3Q9NT62 314 aa26.4■■□□□ 1.82
NCKIPSD-209ENST00000470006 KIF13BQ9NQT8 1826 aa26.39■■□□□ 1.82
NCKIPSD-209ENST00000470006 RBM42Q9BTD8 480 aaKnown RBP26.38■■□□□ 1.81
NCKIPSD-209ENST00000470006 PARP3Q9Y6F1 533 aa26.38■■□□□ 1.81
NCKIPSD-209ENST00000470006 PHKG2P15735 406 aa26.37■■□□□ 1.81
NCKIPSD-209ENST00000470006 C9orf131Q5VYM1 1079 aa26.37■■□□□ 1.81
NCKIPSD-209ENST00000470006 RBM46Q8TBY0 533 aaKnown RBP26.37■■□□□ 1.81
NCKIPSD-209ENST00000470006 EYA1Q99502 592 aa26.37■■□□□ 1.81
NCKIPSD-209ENST00000470006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.37■■□□□ 1.81
NCKIPSD-209ENST00000470006 KIAA1551Q9HCM1 1747 aa26.36■■□□□ 1.81
NCKIPSD-209ENST00000470006 RFC4P35249 363 aa26.36■■□□□ 1.81
NCKIPSD-209ENST00000470006 HTRA3P83110 453 aa26.36■■□□□ 1.81
NCKIPSD-209ENST00000470006 CDCA8Q53HL2 280 aa26.36■■□□□ 1.81
NCKIPSD-209ENST00000470006 WDR90Q96KV7 1748 aa26.36■■□□□ 1.81
NCKIPSD-209ENST00000470006 C10orf71Q711Q0 1435 aa26.35■■□□□ 1.81
NCKIPSD-209ENST00000470006 ARHGEF1Q92888 912 aaKnown RBP26.35■■□□□ 1.81
NCKIPSD-209ENST00000470006 CAPN15O75808 1086 aa26.34■■□□□ 1.81
NCKIPSD-209ENST00000470006 KLRG1Q96E93 195 aa26.33■■□□□ 1.81
NCKIPSD-209ENST00000470006 NCAPD2Q15021 1401 aa26.32■■□□□ 1.8
NCKIPSD-209ENST00000470006 ADRA2BP18089 450 aa26.32■■□□□ 1.8
NCKIPSD-209ENST00000470006 WASHC2AQ641Q2 1341 aa26.32■■□□□ 1.8
NCKIPSD-209ENST00000470006 C4AP0C0L4 1744 aa26.31■■□□□ 1.8
NCKIPSD-209ENST00000470006 GYS1P13807 737 aa26.31■■□□□ 1.8
NCKIPSD-209ENST00000470006 CARD14Q9BXL6 1004 aa26.31■■□□□ 1.8
NCKIPSD-209ENST00000470006 PIM2Q9P1W9 311 aa26.31■■□□□ 1.8
NCKIPSD-209ENST00000470006 KDM2BQ8NHM5 1336 aa26.31■■□□□ 1.8
NCKIPSD-209ENST00000470006 PLEKHG2Q9H7P9 1386 aa26.31■■□□□ 1.8
NCKIPSD-209ENST00000470006 FSTL1Q12841 308 aa26.3■■□□□ 1.8
NCKIPSD-209ENST00000470006 COL13A1Q5TAT6 717 aaPredicted RBP26.3■■□□□ 1.8
NCKIPSD-209ENST00000470006 RC3H1Q5TC82 1133 aaKnown RBP26.3■■□□□ 1.8
NCKIPSD-209ENST00000470006 RNF181Q9P0P0 153 aa26.29■■□□□ 1.8
NCKIPSD-209ENST00000470006 RPS6KA4O75676 772 aa26.28■■□□□ 1.8
NCKIPSD-209ENST00000470006 DALRD3Q5D0E6 543 aaKnown RBP26.28■■□□□ 1.8
NCKIPSD-209ENST00000470006 SLC4A9Q96Q91 983 aa26.28■■□□□ 1.8
NCKIPSD-209ENST00000470006 RRAGCQ9HB90 399 aa26.28■■□□□ 1.8
NCKIPSD-209ENST00000470006 BRCA1P38398 1863 aaKnown RBP26.28■■□□□ 1.8
NCKIPSD-209ENST00000470006 KDRP35968 1356 aa26.27■■□□□ 1.8
NCKIPSD-209ENST00000470006 ARFGEF1Q9Y6D6 1849 aa26.26■■□□□ 1.79
NCKIPSD-209ENST00000470006 KCPQ6ZWJ8 1503 aa26.26■■□□□ 1.79
NCKIPSD-209ENST00000470006 CNTNAP4Q9C0A0 1308 aa26.26■■□□□ 1.79
NCKIPSD-209ENST00000470006 ERVV-2B6SEH9 535 aa26.26■■□□□ 1.79
NCKIPSD-209ENST00000470006 KCNA3P22001 575 aa26.26■■□□□ 1.79
NCKIPSD-209ENST00000470006 HSP90AB1P08238 724 aaKnown RBP26.24■■□□□ 1.79
NCKIPSD-209ENST00000470006 TNNT2P45379 298 aaPredicted RBP26.24■■□□□ 1.79
NCKIPSD-209ENST00000470006 CABP4P57796 275 aa26.24■■□□□ 1.79
NCKIPSD-209ENST00000470006 TNS4Q8IZW8 715 aa26.24■■□□□ 1.79
NCKIPSD-209ENST00000470006 JMYQ8N9B5 988 aa26.24■■□□□ 1.79
NCKIPSD-209ENST00000470006 ANKRD26Q9UPS8 1709 aa26.23■■□□□ 1.79
NCKIPSD-209ENST00000470006 DCAF5Q96JK2 942 aa26.23■■□□□ 1.79
NCKIPSD-209ENST00000470006 POLKQ9UBT6 870 aa26.23■■□□□ 1.79
NCKIPSD-209ENST00000470006 PTCD1O75127 700 aaKnown RBP26.22■■□□□ 1.79
NCKIPSD-209ENST00000470006 EIF4A2Q14240 407 aaKnown RBP26.22■■□□□ 1.79
NCKIPSD-209ENST00000470006 COL5A3P25940 1745 aaPredicted RBP26.22■■□□□ 1.79
NCKIPSD-209ENST00000470006 SRP68Q9UHB9 627 aaKnown RBP26.21■■□□□ 1.79
NCKIPSD-209ENST00000470006 ZNF831Q5JPB2 1677 aa26.2■■□□□ 1.78
NCKIPSD-209ENST00000470006 CHRNA5P30532 468 aa26.2■■□□□ 1.78
NCKIPSD-209ENST00000470006 PLEKHO1Q53GL0 409 aaPredicted RBP26.2■■□□□ 1.78
NCKIPSD-209ENST00000470006 MYH14Q7Z406 1995 aaKnown RBP26.2■■□□□ 1.78
NCKIPSD-209ENST00000470006 FKBP8Q14318 412 aa26.19■■□□□ 1.78
NCKIPSD-209ENST00000470006 ZNF530Q6P9A1 599 aaPredicted RBP26.19■■□□□ 1.78
NCKIPSD-209ENST00000470006 SMC1BQ8NDV3 1235 aa26.19■■□□□ 1.78
NCKIPSD-209ENST00000470006 CRKLP46109 303 aaKnown RBP26.18■■□□□ 1.78
NCKIPSD-209ENST00000470006 POLR3GLQ9BT43 218 aa26.17■■□□□ 1.78
NCKIPSD-209ENST00000470006 TNRC6CQ9HCJ0 1690 aaKnown RBP26.16■■□□□ 1.78
NCKIPSD-209ENST00000470006 DDR1Q08345 913 aa26.16■■□□□ 1.78
NCKIPSD-209ENST00000470006 PCNTO95613 3336 aa26.16■■□□□ 1.78
NCKIPSD-209ENST00000470006 MTHFSP49914 203 aa26.15■■□□□ 1.78
NCKIPSD-209ENST00000470006 SBF1O95248 1867 aa26.15■■□□□ 1.78
NCKIPSD-209ENST00000470006 USP42Q9H9J4 1324 aaKnown RBP26.14■■□□□ 1.78
NCKIPSD-209ENST00000470006 AMOTQ4VCS5 1084 aa26.13■■□□□ 1.77
NCKIPSD-209ENST00000470006 C1orf141Q5JVX7 400 aa26.13■■□□□ 1.77
NCKIPSD-209ENST00000470006 ZPR1O75312 459 aa26.12■■□□□ 1.77
NCKIPSD-209ENST00000470006 PRELPP51888 382 aa26.12■■□□□ 1.77
NCKIPSD-209ENST00000470006 NFATC2IPQ8NCF5 419 aa26.12■■□□□ 1.77
NCKIPSD-209ENST00000470006 RASSF7Q02833 373 aa26.11■■□□□ 1.77
NCKIPSD-209ENST00000470006 KDM6AO15550 1401 aaPredicted RBP26.11■■□□□ 1.77
NCKIPSD-209ENST00000470006 POLRMTO00411 1230 aaKnown RBP26.09■■□□□ 1.77
NCKIPSD-209ENST00000470006 VEGFAP15692 232 aaPredicted RBP26.08■■□□□ 1.77
NCKIPSD-209ENST00000470006 HSPA1AP0DMV8 641 aaKnown RBP26.07■■□□□ 1.76
NCKIPSD-209ENST00000470006 HSPA1BP0DMV9 641 aaKnown RBP26.07■■□□□ 1.76
NCKIPSD-209ENST00000470006 LMNB1P20700 586 aa26.07■■□□□ 1.76
NCKIPSD-209ENST00000470006 USPL1Q5W0Q7 1092 aa26.07■■□□□ 1.76
NCKIPSD-209ENST00000470006 TM4SF1P30408 202 aa26.06■■□□□ 1.76
NCKIPSD-209ENST00000470006 GLTPD2A6NH11 291 aa26.05■■□□□ 1.76
NCKIPSD-209ENST00000470006 INTS5Q6P9B9 1019 aaKnown RBP26.05■■□□□ 1.76
NCKIPSD-209ENST00000470006 ZC3H4Q9UPT8 1303 aaKnown RBP26.05■■□□□ 1.76
NCKIPSD-209ENST00000470006 AEBP1Q8IUX7 1158 aa26.03■■□□□ 1.76
NCKIPSD-209ENST00000470006 TJP1Q07157 1748 aa26.02■■□□□ 1.76
NCKIPSD-209ENST00000470006 DNAJC10Q8IXB1 793 aa26.02■■□□□ 1.76
NCKIPSD-209ENST00000470006 CCDC88AQ3V6T2 1871 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms