RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 FBXO3Q9UK99 471 aa11.7□□□□□ -0.54
TOP3A-203ENST00000469739 CD2BP2O95400 341 aaKnown RBP11.7□□□□□ -0.54
TOP3A-203ENST00000469739 FLIIQ13045 1269 aa11.7□□□□□ -0.54
TOP3A-203ENST00000469739 IGSF1Q8N6C5 1336 aa11.7□□□□□ -0.54
TOP3A-203ENST00000469739 HDGFL1Q5TGJ6 251 aa11.69□□□□□ -0.54
TOP3A-203ENST00000469739 PLEKHM2Q8IWE5 1019 aa11.69□□□□□ -0.54
TOP3A-203ENST00000469739 HSCBQ8IWL3 235 aa11.69□□□□□ -0.54
TOP3A-203ENST00000469739 BRPF1P55201 1214 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-203ENST00000469739 INTS3Q68E01 1043 aaKnown RBP11.69□□□□□ -0.54
TOP3A-203ENST00000469739 IL1RAPL2Q9NP60 686 aa11.69□□□□□ -0.54
TOP3A-203ENST00000469739 CRB1P82279 1406 aa11.68□□□□□ -0.54
TOP3A-203ENST00000469739 PRAMEF22A3QJZ6 481 aa11.68□□□□□ -0.54
TOP3A-203ENST00000469739 HSP90AB1P08238 724 aaKnown RBP11.68□□□□□ -0.54
TOP3A-203ENST00000469739 CDK11BP21127 795 aaKnown RBP11.68□□□□□ -0.54
TOP3A-203ENST00000469739 HSPA2P54652 639 aa11.68□□□□□ -0.54
TOP3A-203ENST00000469739 ZNF530Q6P9A1 599 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-203ENST00000469739 PNMA6EA0A0J9YXQ4 647 aa11.68□□□□□ -0.54
TOP3A-203ENST00000469739 MAP4K4O95819 1239 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-203ENST00000469739 CHMP4BQ9H444 224 aaKnown RBP11.68□□□□□ -0.54
TOP3A-203ENST00000469739 BMP2KLQ5H9B9 411 aa11.67□□□□□ -0.54
TOP3A-203ENST00000469739 ANKRD44Q8N8A2 993 aa11.67□□□□□ -0.54
TOP3A-203ENST00000469739 DCTPP1Q9H773 170 aa11.67□□□□□ -0.54
TOP3A-203ENST00000469739 GCP02774 474 aa11.67□□□□□ -0.54
TOP3A-203ENST00000469739 PIP4K2AP48426 406 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-203ENST00000469739 TEFQ10587 303 aa11.67□□□□□ -0.54
TOP3A-203ENST00000469739 TAF7Q15545 349 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-203ENST00000469739 NOL8Q76FK4 1167 aaKnown RBP11.67□□□□□ -0.54
TOP3A-203ENST00000469739 AXIN2Q9Y2T1 843 aa11.67□□□□□ -0.54
TOP3A-203ENST00000469739 LRRFIP2Q9Y608 721 aaKnown RBP11.67□□□□□ -0.54
TOP3A-203ENST00000469739 CHRNA2Q15822 529 aa11.67□□□□□ -0.54
TOP3A-203ENST00000469739 RTL1A6NKG5 1358 aa11.66□□□□□ -0.54
TOP3A-203ENST00000469739 AIMP1Q12904 312 aaKnown RBP11.66□□□□□ -0.54
TOP3A-203ENST00000469739 NPHP4O75161 1426 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-203ENST00000469739 ARHGEF10O15013 1369 aa11.66□□□□□ -0.54
TOP3A-203ENST00000469739 CCDC30Q5VVM6 783 aa11.66□□□□□ -0.54
TOP3A-203ENST00000469739 RILPL2Q969X0 211 aa11.66□□□□□ -0.54
TOP3A-203ENST00000469739 CHPF2Q9P2E5 772 aa11.66□□□□□ -0.54
TOP3A-203ENST00000469739 VIRMAQ69YN4 1812 aaKnown RBP11.66□□□□□ -0.54
TOP3A-203ENST00000469739 HSP90AA2PQ14568 343 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-203ENST00000469739 BCL11BQ9C0K0 894 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-203ENST00000469739 ADGRL3Q9HAR2 1447 aa11.65□□□□□ -0.54
TOP3A-203ENST00000469739 NWD1Q149M9 1564 aa11.65□□□□□ -0.54
TOP3A-203ENST00000469739 SDSP20132 328 aa11.65□□□□□ -0.54
TOP3A-203ENST00000469739 NLRP2Q9NX02 1062 aa11.65□□□□□ -0.54
TOP3A-203ENST00000469739 LTN1O94822 1766 aa11.65□□□□□ -0.54
TOP3A-203ENST00000469739 TRIM6-TRIM34B2RNG4 842 aa11.65□□□□□ -0.55
TOP3A-203ENST00000469739 SLC39A6Q13433 755 aa11.65□□□□□ -0.55
TOP3A-203ENST00000469739 ANTXR1Q9H6X2 564 aa11.65□□□□□ -0.55
TOP3A-203ENST00000469739 RGS12O14924 1447 aa11.65□□□□□ -0.55
TOP3A-203ENST00000469739 KRT28Q7Z3Y7 464 aa11.64□□□□□ -0.55
TOP3A-203ENST00000469739 IP6K1Q92551 441 aa11.64□□□□□ -0.55
TOP3A-203ENST00000469739 RRAGDQ9NQL2 400 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-203ENST00000469739 BTBD11A6QL63 1104 aa11.64□□□□□ -0.55
TOP3A-203ENST00000469739 CDC45O75419 566 aa11.64□□□□□ -0.55
TOP3A-203ENST00000469739 GNAI2P04899 355 aa11.64□□□□□ -0.55
TOP3A-203ENST00000469739 CSB-PGBD3P0DP91 1061 aa11.64□□□□□ -0.55
TOP3A-203ENST00000469739 NUTM1Q86Y26 1132 aa11.64□□□□□ -0.55
TOP3A-203ENST00000469739 RPAP2Q8IXW5 612 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-203ENST00000469739 MAP3K5Q99683 1374 aa11.64□□□□□ -0.55
TOP3A-203ENST00000469739 PTPRCP08575 1304 aa11.64□□□□□ -0.55
TOP3A-203ENST00000469739 PI4KAP2A4QPH2 592 aa11.63□□□□□ -0.55
TOP3A-203ENST00000469739 FOXD4L5Q5VV16 416 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-203ENST00000469739 PI4KAP1Q8N8J0 262 aa11.63□□□□□ -0.55
TOP3A-203ENST00000469739 ANKRD24Q8TF21 1146 aa11.63□□□□□ -0.55
TOP3A-203ENST00000469739 FOXD4L4Q8WXT5 416 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-203ENST00000469739 JARID2Q92833 1246 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-203ENST00000469739 TTC22Q5TAA0 569 aa11.63□□□□□ -0.55
TOP3A-203ENST00000469739 DTNBO60941 627 aa11.63□□□□□ -0.55
TOP3A-203ENST00000469739 KDRP35968 1356 aa11.62□□□□□ -0.55
TOP3A-203ENST00000469739 KIAA0232Q92628 1395 aa11.62□□□□□ -0.55
TOP3A-203ENST00000469739 RRP9O43818 475 aaKnown RBP11.62□□□□□ -0.55
TOP3A-203ENST00000469739 NBPF7P0C2Y1 421 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-203ENST00000469739 PROSER3Q2NL68 480 aa11.62□□□□□ -0.55
TOP3A-203ENST00000469739 C1orf141Q5JVX7 400 aa11.62□□□□□ -0.55
TOP3A-203ENST00000469739 UBTFL1P0CB47 393 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-203ENST00000469739 CCT4P50991 539 aaKnown RBP11.62□□□□□ -0.55
TOP3A-203ENST00000469739 KIF2CQ99661 725 aa11.62□□□□□ -0.55
TOP3A-203ENST00000469739 ATP10DQ9P241 1426 aa11.62□□□□□ -0.55
TOP3A-203ENST00000469739 HMMRO75330 724 aa11.61□□□□□ -0.55
TOP3A-203ENST00000469739 SURF6O75683 361 aaKnown RBP11.61□□□□□ -0.55
TOP3A-203ENST00000469739 A0A0U1RQG5 324 aaPredicted RBP11.61□□□□□ -0.55
TOP3A-203ENST00000469739 NAP1L5Q96NT1 182 aaPredicted RBP11.61□□□□□ -0.55
TOP3A-203ENST00000469739 USP44Q9H0E7 712 aa11.61□□□□□ -0.55
TOP3A-203ENST00000469739 MYL6BP14649 208 aa11.61□□□□□ -0.55
TOP3A-203ENST00000469739 OS9Q13438 667 aaPredicted RBP11.6□□□□□ -0.55
TOP3A-203ENST00000469739 CWF19L2Q2TBE0 894 aaKnown RBP11.6□□□□□ -0.55
TOP3A-203ENST00000469739 CHAMP1Q96JM3 812 aa11.6□□□□□ -0.55
TOP3A-203ENST00000469739 NFAT5O94916 1531 aa11.6□□□□□ -0.55
TOP3A-203ENST00000469739 SRGAP3O43295 1099 aa11.59□□□□□ -0.55
TOP3A-203ENST00000469739 PPP1R42Q7Z4L9 355 aa11.59□□□□□ -0.55
TOP3A-203ENST00000469739 LRRC37A3O60309 1634 aa11.59□□□□□ -0.55
TOP3A-203ENST00000469739 PDE1AP54750 535 aa11.59□□□□□ -0.55
TOP3A-203ENST00000469739 EIF4A1P60842 406 aaKnown RBP11.59□□□□□ -0.55
TOP3A-203ENST00000469739 UNC5CLQ8IV45 518 aa11.59□□□□□ -0.55
TOP3A-203ENST00000469739 KIF24Q5T7B8 1368 aa11.59□□□□□ -0.55
TOP3A-203ENST00000469739 ATF3P18847 181 aa11.59□□□□□ -0.55
TOP3A-203ENST00000469739 RBM25P49756 843 aaKnown RBP11.59□□□□□ -0.55
TOP3A-203ENST00000469739 FOXD4L6Q3SYB3 417 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-203ENST00000469739 PLEKHO1Q53GL0 409 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-203ENST00000469739 FOXD4L3Q6VB84 417 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms