RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 FHDC1Q9C0D6 1143 aaPredicted RBP28.59■■■□□ 2.17
RTN4R-205ENST00000469601 NUDCQ9Y266 331 aa28.58■■■□□ 2.17
RTN4R-205ENST00000469601 PPP2R1AP30153 589 aa28.57■■■□□ 2.16
RTN4R-205ENST00000469601 NFATC2IPQ8NCF5 419 aa28.57■■■□□ 2.16
RTN4R-205ENST00000469601 LINC00116Q8NCU8 138 aa28.57■■■□□ 2.16
RTN4R-205ENST00000469601 SYT17Q9BSW7 474 aa28.57■■■□□ 2.16
RTN4R-205ENST00000469601 C4BP0C0L5 1744 aa28.56■■■□□ 2.16
RTN4R-205ENST00000469601 RBM42Q9BTD8 480 aaKnown RBP28.56■■■□□ 2.16
RTN4R-205ENST00000469601 MAP3K5Q99683 1374 aa28.55■■■□□ 2.16
RTN4R-205ENST00000469601 SSFA2P28290 1259 aa28.55■■■□□ 2.16
RTN4R-205ENST00000469601 ITPK1Q13572 414 aa28.55■■■□□ 2.16
RTN4R-205ENST00000469601 MTHFSDQ2M296 383 aaKnown RBP28.55■■■□□ 2.16
RTN4R-205ENST00000469601 TAF1LQ8IZX4 1826 aa28.53■■■□□ 2.16
RTN4R-205ENST00000469601 TUBGCP6Q96RT7 1819 aa28.53■■■□□ 2.16
RTN4R-205ENST00000469601 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.52■■■□□ 2.16
RTN4R-205ENST00000469601 SLC52A2Q9HAB3 445 aa28.52■■■□□ 2.16
RTN4R-205ENST00000469601 GNPATO15228 680 aa28.51■■■□□ 2.15
RTN4R-205ENST00000469601 RNMTO43148 476 aaKnown RBP28.51■■■□□ 2.15
RTN4R-205ENST00000469601 PHF14O94880 888 aa28.51■■■□□ 2.15
RTN4R-205ENST00000469601 GAS2L2Q8NHY3 880 aa28.51■■■□□ 2.15
RTN4R-205ENST00000469601 RC3H1Q5TC82 1133 aaKnown RBP28.49■■■□□ 2.15
RTN4R-205ENST00000469601 LGR6Q9HBX8 967 aa28.49■■■□□ 2.15
RTN4R-205ENST00000469601 PTCD1O75127 700 aaKnown RBP28.48■■■□□ 2.15
RTN4R-205ENST00000469601 SLC4A9Q96Q91 983 aa28.48■■■□□ 2.15
RTN4R-205ENST00000469601 ZNF831Q5JPB2 1677 aa28.48■■■□□ 2.15
RTN4R-205ENST00000469601 MSL1Q68DK7 614 aa28.47■■■□□ 2.15
RTN4R-205ENST00000469601 RTCBQ9Y3I0 505 aaKnown RBP28.47■■■□□ 2.15
RTN4R-205ENST00000469601 COL24A1Q17RW2 1714 aa28.46■■■□□ 2.15
RTN4R-205ENST00000469601 U2AF1L5P0DN76 240 aaPredicted RBP28.46■■■□□ 2.15
RTN4R-205ENST00000469601 U2AF1Q01081 240 aaKnown RBP eCLIP28.46■■■□□ 2.15
RTN4R-205ENST00000469601 KLHL34Q8N239 644 aa28.46■■■□□ 2.15
RTN4R-205ENST00000469601 CNTNAP4Q9C0A0 1308 aa28.45■■■□□ 2.15
RTN4R-205ENST00000469601 GNAT3A8MTJ3 354 aa28.45■■■□□ 2.14
RTN4R-205ENST00000469601 ADRA2BP18089 450 aa28.45■■■□□ 2.14
RTN4R-205ENST00000469601 AMIGO3Q86WK7 504 aa28.45■■■□□ 2.14
RTN4R-205ENST00000469601 PRKAR2BP31323 418 aa28.44■■■□□ 2.14
RTN4R-205ENST00000469601 RSPH6AQ9H0K4 717 aa28.44■■■□□ 2.14
RTN4R-205ENST00000469601 MRC1P22897 1456 aa28.44■■■□□ 2.14
RTN4R-205ENST00000469601 SCN11AQ9UI33 1791 aa28.43■■■□□ 2.14
RTN4R-205ENST00000469601 FCHSD2O94868 740 aa28.43■■■□□ 2.14
RTN4R-205ENST00000469601 TRAPPC3LQ5T215 181 aa28.43■■■□□ 2.14
RTN4R-205ENST00000469601 UBR3Q6ZT12 1888 aa28.4■■■□□ 2.14
RTN4R-205ENST00000469601 RPS6KA4O75676 772 aa28.4■■■□□ 2.14
RTN4R-205ENST00000469601 TEFQ10587 303 aa28.4■■■□□ 2.14
RTN4R-205ENST00000469601 SMIM5Q71RC9 77 aa28.4■■■□□ 2.14
RTN4R-205ENST00000469601 PHACTR3Q96KR7 559 aa28.38■■■□□ 2.13
RTN4R-205ENST00000469601 ADAMTS7Q9UKP4 1686 aa28.38■■■□□ 2.13
RTN4R-205ENST00000469601 CRKLP46109 303 aaKnown RBP28.37■■■□□ 2.13
RTN4R-205ENST00000469601 RALBP1Q15311 655 aa28.37■■■□□ 2.13
RTN4R-205ENST00000469601 TTC5Q8N0Z6 440 aa28.37■■■□□ 2.13
RTN4R-205ENST00000469601 CD2APQ9Y5K6 639 aa28.37■■■□□ 2.13
RTN4R-205ENST00000469601 RFC4P35249 363 aa28.36■■■□□ 2.13
RTN4R-205ENST00000469601 SLC39A6Q13433 755 aa28.36■■■□□ 2.13
RTN4R-205ENST00000469601 VSIG10Q8N0Z9 540 aa28.36■■■□□ 2.13
RTN4R-205ENST00000469601 IL17REQ8NFR9 667 aa28.36■■■□□ 2.13
RTN4R-205ENST00000469601 NEFMP07197 916 aa28.35■■■□□ 2.13
RTN4R-205ENST00000469601 DDX10Q13206 875 aaKnown RBP28.35■■■□□ 2.13
RTN4R-205ENST00000469601 NLGN1Q8N2Q7 840 aa28.35■■■□□ 2.13
RTN4R-205ENST00000469601 ARHGEF1Q92888 912 aaKnown RBP28.35■■■□□ 2.13
RTN4R-205ENST00000469601 YY1P25490 414 aa28.34■■■□□ 2.13
RTN4R-205ENST00000469601 GPR162Q16538 588 aa28.33■■■□□ 2.13
RTN4R-205ENST00000469601 RTF1Q92541 710 aaKnown RBP28.33■■■□□ 2.13
RTN4R-205ENST00000469601 CICQ96RK0 1608 aaPredicted RBP28.32■■■□□ 2.12
RTN4R-205ENST00000469601 COL5A3P25940 1745 aaPredicted RBP28.32■■■□□ 2.12
RTN4R-205ENST00000469601 ZEB1P37275 1124 aaPredicted RBP28.32■■■□□ 2.12
RTN4R-205ENST00000469601 DNAJC10Q8IXB1 793 aa28.32■■■□□ 2.12
RTN4R-205ENST00000469601 NLGN2Q8NFZ4 835 aa28.31■■■□□ 2.12
RTN4R-205ENST00000469601 PNNQ9H307 717 aaKnown RBP28.31■■■□□ 2.12
RTN4R-205ENST00000469601 CCDC87Q9NVE4 849 aa28.31■■■□□ 2.12
RTN4R-205ENST00000469601 CEMIPQ8WUJ3 1361 aa28.31■■■□□ 2.12
RTN4R-205ENST00000469601 KCPQ6ZWJ8 1503 aa28.29■■■□□ 2.12
RTN4R-205ENST00000469601 HTATSF1O43719 755 aaKnown RBP28.29■■■□□ 2.12
RTN4R-205ENST00000469601 INTS5Q6P9B9 1019 aaKnown RBP28.29■■■□□ 2.12
RTN4R-205ENST00000469601 ZNF790Q6PG37 636 aa28.29■■■□□ 2.12
RTN4R-205ENST00000469601 MMP10P09238 476 aa28.28■■■□□ 2.12
RTN4R-205ENST00000469601 CYP19A1P11511 503 aaPredicted RBP28.28■■■□□ 2.12
RTN4R-205ENST00000469601 STARD3NLO95772 234 aa28.27■■■□□ 2.12
RTN4R-205ENST00000469601 TEX13AQ9BXU3 409 aaPredicted RBP28.27■■■□□ 2.12
RTN4R-205ENST00000469601 TJP1Q07157 1748 aa28.26■■■□□ 2.12
RTN4R-205ENST00000469601 GYS1P13807 737 aa28.26■■■□□ 2.11
RTN4R-205ENST00000469601 PELP1Q8IZL8 1130 aaKnown RBP28.26■■■□□ 2.11
RTN4R-205ENST00000469601 BTBD11A6QL63 1104 aa28.24■■■□□ 2.11
RTN4R-205ENST00000469601 ZNF496Q96IT1 587 aaPredicted RBP28.24■■■□□ 2.11
RTN4R-205ENST00000469601 FMNL2Q96PY5 1086 aa28.24■■■□□ 2.11
RTN4R-205ENST00000469601 USP42Q9H9J4 1324 aaKnown RBP28.23■■■□□ 2.11
RTN4R-205ENST00000469601 HEG1Q9ULI3 1381 aa28.23■■■□□ 2.11
RTN4R-205ENST00000469601 SOS1Q07889 1333 aaPredicted RBP28.22■■■□□ 2.11
RTN4R-205ENST00000469601 GRIN3BO60391 1043 aa28.22■■■□□ 2.11
RTN4R-205ENST00000469601 ZPR1O75312 459 aa28.22■■■□□ 2.11
RTN4R-205ENST00000469601 MYBBP1AQ9BQG0 1328 aaKnown RBP28.21■■■□□ 2.11
RTN4R-205ENST00000469601 MCM10Q7L590 875 aa28.21■■■□□ 2.11
RTN4R-205ENST00000469601 PARP3Q9Y6F1 533 aa28.21■■■□□ 2.11
RTN4R-205ENST00000469601 VIRMAQ69YN4 1812 aaKnown RBP28.2■■■□□ 2.1
RTN4R-205ENST00000469601 MAPK8IP3Q9UPT6 1336 aa28.19■■■□□ 2.1
RTN4R-205ENST00000469601 MYH14Q7Z406 1995 aaKnown RBP28.19■■■□□ 2.1
RTN4R-205ENST00000469601 PLEKHF1Q96S99 279 aa28.19■■■□□ 2.1
RTN4R-205ENST00000469601 SRP68Q9UHB9 627 aaKnown RBP28.19■■■□□ 2.1
RTN4R-205ENST00000469601 ZBTB1Q9Y2K1 713 aa28.19■■■□□ 2.1
RTN4R-205ENST00000469601 UBR2Q8IWV8 1755 aa28.18■■■□□ 2.1
RTN4R-205ENST00000469601 COL15A1P39059 1388 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms