RNA–Protein interactions for RNA: ENST00000469147.5

TRAPPC12-215, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 1,002 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-215ENST00000469147 GAS2L2Q8NHY3 880 aa12.78□□□□□ -0.36
TRAPPC12-215ENST00000469147 PIGBQ92521 554 aa12.78□□□□□ -0.36
TRAPPC12-215ENST00000469147 HMGB2P26583 209 aaKnown RBP12.77□□□□□ -0.37
TRAPPC12-215ENST00000469147 AKAP4Q5JQC9 854 aa12.77□□□□□ -0.37
TRAPPC12-215ENST00000469147 SLC16A10Q8TF71 515 aa12.77□□□□□ -0.37
TRAPPC12-215ENST00000469147 AKT1S1Q96B36 256 aa12.77□□□□□ -0.37
TRAPPC12-215ENST00000469147 DCAF5Q96JK2 942 aa12.77□□□□□ -0.37
TRAPPC12-215ENST00000469147 MTHFSDQ2M296 383 aaKnown RBP12.76□□□□□ -0.37
TRAPPC12-215ENST00000469147 MPRIPQ6WCQ1 1025 aa12.76□□□□□ -0.37
TRAPPC12-215ENST00000469147 DIEXFQ68CQ4 756 aaKnown RBP12.75□□□□□ -0.37
TRAPPC12-215ENST00000469147 PLEKHF1Q96S99 279 aa12.75□□□□□ -0.37
TRAPPC12-215ENST00000469147 MRS2Q9HD23 443 aa12.75□□□□□ -0.37
TRAPPC12-215ENST00000469147 CCNL1Q9UK58 526 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC12-215ENST00000469147 ASAP1Q9ULH1 1129 aa12.75□□□□□ -0.37
TRAPPC12-215ENST00000469147 ADAMTS7Q9UKP4 1686 aa12.74□□□□□ -0.37
TRAPPC12-215ENST00000469147 KDM6AO15550 1401 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC12-215ENST00000469147 MAP3K5Q99683 1374 aa12.74□□□□□ -0.37
TRAPPC12-215ENST00000469147 MAPK8IP3Q9UPT6 1336 aa12.74□□□□□ -0.37
TRAPPC12-215ENST00000469147 SLC4A9Q96Q91 983 aa12.74□□□□□ -0.37
TRAPPC12-215ENST00000469147 TAF1LQ8IZX4 1826 aa12.74□□□□□ -0.37
TRAPPC12-215ENST00000469147 ERVV-2B6SEH9 535 aa12.73□□□□□ -0.37
TRAPPC12-215ENST00000469147 ZNF784Q8NCA9 323 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC12-215ENST00000469147 PHACTR3Q96KR7 559 aa12.73□□□□□ -0.37
TRAPPC12-215ENST00000469147 SGIP1Q9BQI5 828 aa12.73□□□□□ -0.37
TRAPPC12-215ENST00000469147 SCN11AQ9UI33 1791 aa12.73□□□□□ -0.37
TRAPPC12-215ENST00000469147 MRC1P22897 1456 aa12.72□□□□□ -0.37
TRAPPC12-215ENST00000469147 PNPLA7Q6ZV29 1317 aa12.72□□□□□ -0.37
TRAPPC12-215ENST00000469147 GNAT3A8MTJ3 354 aa12.72□□□□□ -0.37
TRAPPC12-215ENST00000469147 LGR6Q9HBX8 967 aa12.72□□□□□ -0.37
TRAPPC12-215ENST00000469147 ADAMTS8Q9UP79 889 aa12.72□□□□□ -0.37
TRAPPC12-215ENST00000469147 SENP3-EIF4A1A0A087X0R7 540 aa12.71□□□□□ -0.37
TRAPPC12-215ENST00000469147 CCER2I3L3R5 266 aa12.71□□□□□ -0.37
TRAPPC12-215ENST00000469147 HTATSF1O43719 755 aaKnown RBP12.71□□□□□ -0.37
TRAPPC12-215ENST00000469147 ITPK1Q13572 414 aa12.71□□□□□ -0.37
TRAPPC12-215ENST00000469147 CCDC184Q52MB2 194 aa12.71□□□□□ -0.37
TRAPPC12-215ENST00000469147 PNISRQ8TF01 805 aaKnown RBP12.71□□□□□ -0.37
TRAPPC12-215ENST00000469147 RUNDC1Q96C34 613 aa12.71□□□□□ -0.37
TRAPPC12-215ENST00000469147 ATG3Q9NT62 314 aa12.71□□□□□ -0.37
TRAPPC12-215ENST00000469147 TMOD3Q9NYL9 352 aa12.71□□□□□ -0.37
TRAPPC12-215ENST00000469147 PALLDQ8WX93 1383 aa12.7□□□□□ -0.38
TRAPPC12-215ENST00000469147 VIRMAQ69YN4 1812 aaKnown RBP12.7□□□□□ -0.38
TRAPPC12-215ENST00000469147 RNMTO43148 476 aaKnown RBP12.7□□□□□ -0.38
TRAPPC12-215ENST00000469147 NFE2L2Q16236 605 aa12.7□□□□□ -0.38
TRAPPC12-215ENST00000469147 COL23A1Q86Y22 540 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC12-215ENST00000469147 LINC00116Q8NCU8 138 aa12.7□□□□□ -0.38
TRAPPC12-215ENST00000469147 CEMIPQ8WUJ3 1361 aa12.69□□□□□ -0.38
TRAPPC12-215ENST00000469147 GRIN3BO60391 1043 aa12.69□□□□□ -0.38
TRAPPC12-215ENST00000469147 CABP4P57796 275 aa12.69□□□□□ -0.38
TRAPPC12-215ENST00000469147 FLAD1Q8NFF5 587 aa12.69□□□□□ -0.38
TRAPPC12-215ENST00000469147 RTF1Q92541 710 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-215ENST00000469147 SMARCC1Q92922 1105 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC12-215ENST00000469147 C5P01031 1676 aa12.68□□□□□ -0.38
TRAPPC12-215ENST00000469147 LMOD3Q0VAK6 560 aa12.68□□□□□ -0.38
TRAPPC12-215ENST00000469147 MSL1Q68DK7 614 aa12.68□□□□□ -0.38
TRAPPC12-215ENST00000469147 SLC52A2Q9HAB3 445 aa12.68□□□□□ -0.38
TRAPPC12-215ENST00000469147 MYH14Q7Z406 1995 aaKnown RBP12.68□□□□□ -0.38
TRAPPC12-215ENST00000469147 DLG5Q8TDM6 1919 aa12.67□□□□□ -0.38
TRAPPC12-215ENST00000469147 GIGYF1O75420 1035 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC12-215ENST00000469147 TMPOP42166 694 aaKnown RBP12.67□□□□□ -0.38
TRAPPC12-215ENST00000469147 IL17REQ8NFR9 667 aa12.67□□□□□ -0.38
TRAPPC12-215ENST00000469147 AK7Q96M32 723 aa12.67□□□□□ -0.38
TRAPPC12-215ENST00000469147 QSER1Q2KHR3 1735 aa12.66□□□□□ -0.38
TRAPPC12-215ENST00000469147 LOC102724428A0A0B4J2F2 783 aa12.66□□□□□ -0.38
TRAPPC12-215ENST00000469147 SIK1P57059 783 aa12.66□□□□□ -0.38
TRAPPC12-215ENST00000469147 TEFQ10587 303 aa12.66□□□□□ -0.38
TRAPPC12-215ENST00000469147 CCDC146Q8IYE0 955 aa12.66□□□□□ -0.38
TRAPPC12-215ENST00000469147 NFATC2IPQ8NCF5 419 aa12.66□□□□□ -0.38
TRAPPC12-215ENST00000469147 UBR3Q6ZT12 1888 aa12.65□□□□□ -0.38
TRAPPC12-215ENST00000469147 C4BP0C0L5 1744 aa12.65□□□□□ -0.38
TRAPPC12-215ENST00000469147 COL24A1Q17RW2 1714 aa12.65□□□□□ -0.38
TRAPPC12-215ENST00000469147 C1QTNF8P60827 252 aa12.65□□□□□ -0.38
TRAPPC12-215ENST00000469147 NCBP3Q53F19 620 aaKnown RBP12.65□□□□□ -0.38
TRAPPC12-215ENST00000469147 SIPA1L3O60292 1781 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC12-215ENST00000469147 UTRNP46939 3433 aa12.65□□□□□ -0.39
TRAPPC12-215ENST00000469147 ZNF831Q5JPB2 1677 aa12.64□□□□□ -0.39
TRAPPC12-215ENST00000469147 PHF14O94880 888 aa12.64□□□□□ -0.39
TRAPPC12-215ENST00000469147 RIPK4P57078 832 aa12.64□□□□□ -0.39
TRAPPC12-215ENST00000469147 SLC39A6Q13433 755 aa12.64□□□□□ -0.39
TRAPPC12-215ENST00000469147 MCM10Q7L590 875 aa12.63□□□□□ -0.39
TRAPPC12-215ENST00000469147 NLGN2Q8NFZ4 835 aa12.63□□□□□ -0.39
TRAPPC12-215ENST00000469147 CICQ96RK0 1608 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC12-215ENST00000469147 APAF1O14727 1248 aa12.62□□□□□ -0.39
TRAPPC12-215ENST00000469147 ATP6V1AP38606 617 aa12.62□□□□□ -0.39
TRAPPC12-215ENST00000469147 FAM9BQ8IZU0 186 aa12.62□□□□□ -0.39
TRAPPC12-215ENST00000469147 MIER1Q8N108 512 aa12.62□□□□□ -0.39
TRAPPC12-215ENST00000469147 NGEFQ8N5V2 710 aa12.62□□□□□ -0.39
TRAPPC12-215ENST00000469147 RBM42Q9BTD8 480 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-215ENST00000469147 KCNQ3O43525 872 aa12.61□□□□□ -0.39
TRAPPC12-215ENST00000469147 PTCD1O75127 700 aaKnown RBP12.61□□□□□ -0.39
TRAPPC12-215ENST00000469147 DCTN1Q14203 1278 aa12.61□□□□□ -0.39
TRAPPC12-215ENST00000469147 TAF7Q15545 349 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC12-215ENST00000469147 UBR2Q8IWV8 1755 aa12.61□□□□□ -0.39
TRAPPC12-215ENST00000469147 COL5A3P25940 1745 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC12-215ENST00000469147 TJP1Q07157 1748 aa12.6□□□□□ -0.39
TRAPPC12-215ENST00000469147 CALD1Q05682 793 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-215ENST00000469147 NEUROD2Q15784 382 aa12.6□□□□□ -0.39
TRAPPC12-215ENST00000469147 CCDC27Q2M243 656 aa12.6□□□□□ -0.39
TRAPPC12-215ENST00000469147 ZNF790Q6PG37 636 aa12.6□□□□□ -0.39
TRAPPC12-215ENST00000469147 TTC5Q8N0Z6 440 aa12.6□□□□□ -0.39
TRAPPC12-215ENST00000469147 BABAM1Q9NWV8 329 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms