RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 SPG7Q9UQ90 795 aa11.86□□□□□ -0.51
SMC1A-205ENST00000469129 TNNQ9UQP3 1299 aa11.86□□□□□ -0.51
SMC1A-205ENST00000469129 C5P01031 1676 aa11.86□□□□□ -0.51
SMC1A-205ENST00000469129 LRP6O75581 1613 aa11.86□□□□□ -0.51
SMC1A-205ENST00000469129 PAPPAQ13219 1627 aa11.86□□□□□ -0.51
SMC1A-205ENST00000469129 SPATA31A6Q5VVP1 1343 aa11.86□□□□□ -0.51
SMC1A-205ENST00000469129 ELL2O00472 640 aaPredicted RBP11.85□□□□□ -0.51
SMC1A-205ENST00000469129 HOXB7P09629 217 aa11.85□□□□□ -0.51
SMC1A-205ENST00000469129 ILDR2Q71H61 639 aa11.85□□□□□ -0.51
SMC1A-205ENST00000469129 TMEM57Q8N5G2 664 aa11.85□□□□□ -0.51
SMC1A-205ENST00000469129 IL17REQ8NFR9 667 aa11.85□□□□□ -0.51
SMC1A-205ENST00000469129 CABLES1Q8TDN4 633 aa11.85□□□□□ -0.51
SMC1A-205ENST00000469129 NWD2Q9ULI1 1742 aa11.85□□□□□ -0.51
SMC1A-205ENST00000469129 WDR17Q8IZU2 1322 aa11.85□□□□□ -0.51
SMC1A-205ENST00000469129 UBR2Q8IWV8 1755 aa11.84□□□□□ -0.51
SMC1A-205ENST00000469129 NRAPQ86VF7 1730 aa11.84□□□□□ -0.51
SMC1A-205ENST00000469129 RGS12O14924 1447 aa11.84□□□□□ -0.51
SMC1A-205ENST00000469129 RNMTO43148 476 aaKnown RBP11.83□□□□□ -0.52
SMC1A-205ENST00000469129 CCDC30Q5VVM6 783 aa11.83□□□□□ -0.52
SMC1A-205ENST00000469129 NUTM2BA6NNL0 878 aaPredicted RBP11.82□□□□□ -0.52
SMC1A-205ENST00000469129 NUTM2EB1AL46 878 aaPredicted RBP11.82□□□□□ -0.52
SMC1A-205ENST00000469129 HSP90AB1P08238 724 aaKnown RBP11.82□□□□□ -0.52
SMC1A-205ENST00000469129 CHRNA2Q15822 529 aa11.82□□□□□ -0.52
SMC1A-205ENST00000469129 MEX3CQ5U5Q3 659 aaKnown RBP11.82□□□□□ -0.52
SMC1A-205ENST00000469129 NUTM2AQ8IVF1 878 aaPredicted RBP11.82□□□□□ -0.52
SMC1A-205ENST00000469129 KDM6AO15550 1401 aaPredicted RBP11.81□□□□□ -0.52
SMC1A-205ENST00000469129 HDAC1Q13547 482 aaPredicted RBP11.81□□□□□ -0.52
SMC1A-205ENST00000469129 KRT24Q2M2I5 525 aa11.81□□□□□ -0.52
SMC1A-205ENST00000469129 IFNL2Q8IZJ0 200 aa11.81□□□□□ -0.52
SMC1A-205ENST00000469129 ZBTB40Q9NUA8 1239 aa11.81□□□□□ -0.52
SMC1A-205ENST00000469129 RBM19Q9Y4C8 960 aaKnown RBP11.81□□□□□ -0.52
SMC1A-205ENST00000469129 BTBD11A6QL63 1104 aa11.8□□□□□ -0.52
SMC1A-205ENST00000469129 INTS3Q68E01 1043 aaKnown RBP11.8□□□□□ -0.52
SMC1A-205ENST00000469129 MIS18AQ9NYP9 233 aa11.8□□□□□ -0.52
SMC1A-205ENST00000469129 RGS17Q9UGC6 210 aaPredicted RBP11.8□□□□□ -0.52
SMC1A-205ENST00000469129 PCDHB15Q9Y5E8 787 aa11.8□□□□□ -0.52
SMC1A-205ENST00000469129 PCDH11XQ9BZA7 1347 aa11.8□□□□□ -0.52
SMC1A-205ENST00000469129 PCDH11YQ9BZA8 1340 aa11.8□□□□□ -0.52
SMC1A-205ENST00000469129 TOGARAM1Q9Y4F4 1720 aa11.8□□□□□ -0.52
SMC1A-205ENST00000469129 SLC4A2P04920 1241 aa11.79□□□□□ -0.52
SMC1A-205ENST00000469129 PHKG2P15735 406 aa11.79□□□□□ -0.52
SMC1A-205ENST00000469129 MPRIPQ6WCQ1 1025 aa11.79□□□□□ -0.52
SMC1A-205ENST00000469129 TOM1L2Q6ZVM7 507 aa11.79□□□□□ -0.52
SMC1A-205ENST00000469129 ITGB4P16144 1822 aa11.79□□□□□ -0.52
SMC1A-205ENST00000469129 IGHDP01880 384 aa11.78□□□□□ -0.52
SMC1A-205ENST00000469129 CCT4P50991 539 aaKnown RBP11.78□□□□□ -0.52
SMC1A-205ENST00000469129 EIF4A1P60842 406 aaKnown RBP11.78□□□□□ -0.52
SMC1A-205ENST00000469129 HDGFL1Q5TGJ6 251 aa11.78□□□□□ -0.52
SMC1A-205ENST00000469129 DCAF5Q96JK2 942 aa11.78□□□□□ -0.52
SMC1A-205ENST00000469129 CARD10Q9BWT7 1032 aa11.78□□□□□ -0.52
SMC1A-205ENST00000469129 LGR6Q9HBX8 967 aa11.78□□□□□ -0.52
SMC1A-205ENST00000469129 GLI3P10071 1580 aa11.78□□□□□ -0.52
SMC1A-205ENST00000469129 AFDNP55196 1824 aaKnown RBP11.77□□□□□ -0.52
SMC1A-205ENST00000469129 ZBTB7BO15156 539 aaPredicted RBP11.77□□□□□ -0.53
SMC1A-205ENST00000469129 HEG1Q9ULI3 1381 aa11.77□□□□□ -0.53
SMC1A-205ENST00000469129 FLIIQ13045 1269 aa11.76□□□□□ -0.53
SMC1A-205ENST00000469129 SLC52A2Q9HAB3 445 aa11.76□□□□□ -0.53
SMC1A-205ENST00000469129 ARFGEF2Q9Y6D5 1785 aa11.76□□□□□ -0.53
SMC1A-205ENST00000469129 ADAMTS2O95450 1211 aa11.75□□□□□ -0.53
SMC1A-205ENST00000469129 IL2RBP14784 551 aa11.75□□□□□ -0.53
SMC1A-205ENST00000469129 RGS3P49796 1198 aa11.75□□□□□ -0.53
SMC1A-205ENST00000469129 EVA1CP58658 441 aa11.75□□□□□ -0.53
SMC1A-205ENST00000469129 FKBP5Q13451 457 aaPredicted RBP11.75□□□□□ -0.53
SMC1A-205ENST00000469129 POTEAQ6S8J7 498 aa11.75□□□□□ -0.53
SMC1A-205ENST00000469129 GCC1Q96CN9 775 aa11.75□□□□□ -0.53
SMC1A-205ENST00000469129 C8orf37Q96NL8 207 aa11.75□□□□□ -0.53
SMC1A-205ENST00000469129 ATP10DQ9P241 1426 aa11.75□□□□□ -0.53
SMC1A-205ENST00000469129 DOT1LQ8TEK3 1739 aa11.74□□□□□ -0.53
SMC1A-205ENST00000469129 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.74□□□□□ -0.53
SMC1A-205ENST00000469129 ZNF772Q68DY9 489 aaPredicted RBP11.74□□□□□ -0.53
SMC1A-205ENST00000469129 SMC5Q8IY18 1101 aa11.74□□□□□ -0.53
SMC1A-205ENST00000469129 AFF2P51816 1311 aa11.74□□□□□ -0.53
SMC1A-205ENST00000469129 DISP2A7MBM2 1401 aa11.73□□□□□ -0.53
SMC1A-205ENST00000469129 PDE4AP27815 886 aa11.73□□□□□ -0.53
SMC1A-205ENST00000469129 FAM161AQ3B820 660 aa11.73□□□□□ -0.53
SMC1A-205ENST00000469129 NUP188Q5SRE5 1749 aa11.73□□□□□ -0.53
SMC1A-205ENST00000469129 TTC5Q8N0Z6 440 aa11.73□□□□□ -0.53
SMC1A-205ENST00000469129 ZCRB1Q8TBF4 217 aaKnown RBP11.73□□□□□ -0.53
SMC1A-205ENST00000469129 BACH2Q9BYV9 841 aa11.73□□□□□ -0.53
SMC1A-205ENST00000469129 STRN4Q9NRL3 753 aa11.73□□□□□ -0.53
SMC1A-205ENST00000469129 DBF4Q9UBU7 674 aaPredicted RBP11.73□□□□□ -0.53
SMC1A-205ENST00000469129 PDZRN3Q9UPQ7 1066 aa11.73□□□□□ -0.53
SMC1A-205ENST00000469129 SOCS7O14512 581 aa11.72□□□□□ -0.53
SMC1A-205ENST00000469129 CYP27B1O15528 508 aa11.72□□□□□ -0.53
SMC1A-205ENST00000469129 G2E3Q7L622 706 aa11.72□□□□□ -0.53
SMC1A-205ENST00000469129 RPAP2Q8IXW5 612 aaPredicted RBP11.72□□□□□ -0.53
SMC1A-205ENST00000469129 TNS2Q63HR2 1409 aa11.71□□□□□ -0.53
SMC1A-205ENST00000469129 HMMRO75330 724 aa11.71□□□□□ -0.53
SMC1A-205ENST00000469129 GIGYF1O75420 1035 aaPredicted RBP11.71□□□□□ -0.53
SMC1A-205ENST00000469129 GNAI3P08754 354 aa11.71□□□□□ -0.53
SMC1A-205ENST00000469129 ANP32AP39687 249 aaKnown RBP11.71□□□□□ -0.53
SMC1A-205ENST00000469129 CABP4P57796 275 aa11.71□□□□□ -0.53
SMC1A-205ENST00000469129 ZNF790Q6PG37 636 aa11.71□□□□□ -0.53
SMC1A-205ENST00000469129 SLC4A10Q6U841 1118 aa11.71□□□□□ -0.53
SMC1A-205ENST00000469129 NGLY1Q96IV0 654 aa11.71□□□□□ -0.53
SMC1A-205ENST00000469129 KCPQ6ZWJ8 1503 aa11.7□□□□□ -0.54
SMC1A-205ENST00000469129 ERVV-2B6SEH9 535 aa11.7□□□□□ -0.54
SMC1A-205ENST00000469129 EIF2S2P20042 333 aaKnown RBP11.7□□□□□ -0.54
SMC1A-205ENST00000469129 NKX1-1Q15270 411 aaPredicted RBP11.7□□□□□ -0.54
SMC1A-205ENST00000469129 LARP1Q6PKG0 1096 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms