RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 LAS1LQ9Y4W2 734 aaKnown RBP6.22□□□□□ -1.41
SF3B1-207ENST00000468925 NCOA2Q15596 1464 aa6.22□□□□□ -1.41
SF3B1-207ENST00000468925 RAB3GAP2Q9H2M9 1393 aa6.21□□□□□ -1.41
SF3B1-207ENST00000468925 GOLGA6L3A6NEY3 463 aa6.21□□□□□ -1.42
SF3B1-207ENST00000468925 KIF20AO95235 890 aa6.21□□□□□ -1.42
SF3B1-207ENST00000468925 RBM25P49756 843 aaKnown RBP6.21□□□□□ -1.42
SF3B1-207ENST00000468925 PDE3BQ13370 1112 aa6.21□□□□□ -1.42
SF3B1-207ENST00000468925 BECN1Q14457 450 aa6.21□□□□□ -1.42
SF3B1-207ENST00000468925 TMCO4Q5TGY1 634 aa6.21□□□□□ -1.42
SF3B1-207ENST00000468925 ZNF428Q96B54 188 aa6.21□□□□□ -1.42
SF3B1-207ENST00000468925 AGBL1Q96MI9 1066 aa6.21□□□□□ -1.42
SF3B1-207ENST00000468925 HMX1Q9NP08 348 aaPredicted RBP6.21□□□□□ -1.42
SF3B1-207ENST00000468925 PRDM4Q9UKN5 801 aa6.21□□□□□ -1.42
SF3B1-207ENST00000468925 EMILIN1Q9Y6C2 1016 aa6.21□□□□□ -1.42
SF3B1-207ENST00000468925 TOP2AP11388 1531 aaKnown RBP6.2□□□□□ -1.42
SF3B1-207ENST00000468925 TONSLQ96HA7 1378 aa6.2□□□□□ -1.42
SF3B1-207ENST00000468925 ABCC8Q09428 1581 aa6.2□□□□□ -1.42
SF3B1-207ENST00000468925 SOGA1O94964 1423 aa6.2□□□□□ -1.42
SF3B1-207ENST00000468925 CNTLNQ9NXG0 1405 aa6.2□□□□□ -1.42
SF3B1-207ENST00000468925 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
SF3B1-207ENST00000468925 CANXP27824 592 aaKnown RBP6.2□□□□□ -1.42
SF3B1-207ENST00000468925 MRE11P49959 708 aa6.2□□□□□ -1.42
SF3B1-207ENST00000468925 FLIIQ13045 1269 aa6.2□□□□□ -1.42
SF3B1-207ENST00000468925 AEBP1Q8IUX7 1158 aa6.2□□□□□ -1.42
SF3B1-207ENST00000468925 TRMT44Q8IYL2 757 aaKnown RBP6.2□□□□□ -1.42
SF3B1-207ENST00000468925 IPO4Q8TEX9 1081 aaKnown RBP6.2□□□□□ -1.42
SF3B1-207ENST00000468925 KCTD15Q96SI1 283 aaPredicted RBP6.2□□□□□ -1.42
SF3B1-207ENST00000468925 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.2□□□□□ -1.42
SF3B1-207ENST00000468925 MAP4K5Q9Y4K4 846 aa6.2□□□□□ -1.42
SF3B1-207ENST00000468925 KTN1Q86UP2 1357 aaKnown RBP6.19□□□□□ -1.42
SF3B1-207ENST00000468925 PPFIA3O75145 1194 aa6.19□□□□□ -1.42
SF3B1-207ENST00000468925 USP17L8P0C7I0 530 aa6.19□□□□□ -1.42
SF3B1-207ENST00000468925 MFAP1P55081 439 aaKnown RBP6.19□□□□□ -1.42
SF3B1-207ENST00000468925 IRX6P78412 446 aaPredicted RBP6.19□□□□□ -1.42
SF3B1-207ENST00000468925 RELBQ01201 579 aa6.19□□□□□ -1.42
SF3B1-207ENST00000468925 FOXD4L5Q5VV16 416 aaPredicted RBP6.19□□□□□ -1.42
SF3B1-207ENST00000468925 PDXDC2PQ6P474 469 aa6.19□□□□□ -1.42
SF3B1-207ENST00000468925 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.19□□□□□ -1.42
SF3B1-207ENST00000468925 Q8N3U1 123 aa6.19□□□□□ -1.42
SF3B1-207ENST00000468925 ADAM32Q8TC27 787 aa6.19□□□□□ -1.42
SF3B1-207ENST00000468925 FOXD4L4Q8WXT5 416 aaPredicted RBP6.19□□□□□ -1.42
SF3B1-207ENST00000468925 PUS7Q96PZ0 661 aaKnown RBP6.19□□□□□ -1.42
SF3B1-207ENST00000468925 OCSTAMPQ9BR26 566 aa6.19□□□□□ -1.42
SF3B1-207ENST00000468925 TMPRSS4Q9NRS4 437 aa6.19□□□□□ -1.42
SF3B1-207ENST00000468925 ERCC6Q03468 1493 aa6.19□□□□□ -1.42
SF3B1-207ENST00000468925 INSRP06213 1382 aa6.18□□□□□ -1.42
SF3B1-207ENST00000468925 SYNJ1O43426 1573 aa6.18□□□□□ -1.42
SF3B1-207ENST00000468925 TTLL8A6PVC2 850 aa6.18□□□□□ -1.42
SF3B1-207ENST00000468925 INTS6LQ5JSJ4 861 aaKnown RBP6.18□□□□□ -1.42
SF3B1-207ENST00000468925 GPKOWQ92917 476 aaPredicted RBP eCLIP6.18□□□□□ -1.42
SF3B1-207ENST00000468925 TSEN34Q9BSV6 310 aaKnown RBP6.18□□□□□ -1.42
SF3B1-207ENST00000468925 GTPBP4Q9BZE4 634 aaKnown RBP6.18□□□□□ -1.42
SF3B1-207ENST00000468925 RRAGDQ9NQL2 400 aaPredicted RBP6.18□□□□□ -1.42
SF3B1-207ENST00000468925 PGPEP1Q9NXJ5 209 aa6.18□□□□□ -1.42
SF3B1-207ENST00000468925 SOS2Q07890 1332 aaPredicted RBP6.18□□□□□ -1.42
SF3B1-207ENST00000468925 ESPNB1AK53 854 aa6.17□□□□□ -1.42
SF3B1-207ENST00000468925 TRAK2O60296 914 aa6.17□□□□□ -1.42
SF3B1-207ENST00000468925 IRS1P35568 1242 aa6.17□□□□□ -1.42
SF3B1-207ENST00000468925 KRT76Q01546 638 aa6.17□□□□□ -1.42
SF3B1-207ENST00000468925 HS1BP3Q53T59 392 aa6.17□□□□□ -1.42
SF3B1-207ENST00000468925 MYH16Q9H6N6 1097 aa6.17□□□□□ -1.42
SF3B1-207ENST00000468925 ZNF395Q9H8N7 513 aaPredicted RBP6.17□□□□□ -1.42
SF3B1-207ENST00000468925 ABCA5Q8WWZ7 1642 aa6.17□□□□□ -1.42
SF3B1-207ENST00000468925 PHLDB1Q86UU1 1377 aa6.17□□□□□ -1.42
SF3B1-207ENST00000468925 SCAPERQ9BY12 1400 aa6.16□□□□□ -1.42
SF3B1-207ENST00000468925 MROH2BQ7Z745 1585 aa6.16□□□□□ -1.42
SF3B1-207ENST00000468925 A0A0U1RQG5 324 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-207ENST00000468925 FSD2A1L4K1 749 aa6.16□□□□□ -1.42
SF3B1-207ENST00000468925 A6NJR5 290 aa6.16□□□□□ -1.42
SF3B1-207ENST00000468925 LETM1O95202 739 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-207ENST00000468925 RFC5P40937 340 aa6.16□□□□□ -1.42
SF3B1-207ENST00000468925 PTK2Q05397 1052 aa6.16□□□□□ -1.42
SF3B1-207ENST00000468925 PPP2R2DQ66LE6 453 aa6.16□□□□□ -1.42
SF3B1-207ENST00000468925 CLUAP1Q96AJ1 413 aa6.16□□□□□ -1.42
SF3B1-207ENST00000468925 INSM2Q96T92 566 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-207ENST00000468925 CHMP4AQ9BY43 222 aa6.16□□□□□ -1.42
SF3B1-207ENST00000468925 PRKRIP1Q9H875 184 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-207ENST00000468925 ZMYM3Q14202 1370 aa6.16□□□□□ -1.42
SF3B1-207ENST00000468925 ZMYM4Q5VZL5 1548 aa6.15□□□□□ -1.42
SF3B1-207ENST00000468925 EIF4G2P78344 907 aaKnown RBP eCLIP6.15□□□□□ -1.42
SF3B1-207ENST00000468925 PTSQ03393 145 aa6.15□□□□□ -1.42
SF3B1-207ENST00000468925 DZIP3Q86Y13 1208 aaKnown RBP6.15□□□□□ -1.42
SF3B1-207ENST00000468925 DCAF11Q8TEB1 546 aa6.15□□□□□ -1.42
SF3B1-207ENST00000468925 MRS2Q9HD23 443 aa6.15□□□□□ -1.42
SF3B1-207ENST00000468925 POLMQ9NP87 494 aaPredicted RBP6.15□□□□□ -1.42
SF3B1-207ENST00000468925 CTSOP43234 321 aaPredicted RBP6.14□□□□□ -1.43
SF3B1-207ENST00000468925 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.14□□□□□ -1.431e-9■■■■□ 22.5
SF3B1-207ENST00000468925 KANK3Q6NY19 840 aa6.14□□□□□ -1.43
SF3B1-207ENST00000468925 ZNF784Q8NCA9 323 aaPredicted RBP6.14□□□□□ -1.43
SF3B1-207ENST00000468925 CCDC18Q5T9S5 1454 aa6.14□□□□□ -1.43
SF3B1-207ENST00000468925 WIZO95785 1651 aa6.14□□□□□ -1.43
SF3B1-207ENST00000468925 POLR1AO95602 1720 aaPredicted RBP6.13□□□□□ -1.43
SF3B1-207ENST00000468925 CDC14CA4D256 554 aa6.13□□□□□ -1.43
SF3B1-207ENST00000468925 DYNC1I1O14576 645 aa6.13□□□□□ -1.43
SF3B1-207ENST00000468925 SPINT1O43278 529 aa6.13□□□□□ -1.43
SF3B1-207ENST00000468925 MCM5P33992 734 aa6.13□□□□□ -1.43
SF3B1-207ENST00000468925 RRP1P56182 461 aaKnown RBP6.13□□□□□ -1.43
SF3B1-207ENST00000468925 DHX9Q08211 1270 aaKnown RBP6.13□□□□□ -1.43
SF3B1-207ENST00000468925 DMTNQ08495 405 aa6.13□□□□□ -1.43
SF3B1-207ENST00000468925 SKOR2Q2VWA4 1001 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms