RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 SLC4A9Q96Q91 983 aa21.51■■□□□ 1.03
SRRM1-207ENST00000468822 KIAA1551Q9HCM1 1747 aa21.51■■□□□ 1.03
SRRM1-207ENST00000468822 PXDNLA1KZ92 1463 aa21.51■■□□□ 1.03
SRRM1-207ENST00000468822 CICQ96RK0 1608 aaPredicted RBP21.51■■□□□ 1.03
SRRM1-207ENST00000468822 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.5■■□□□ 1.033e-7■■■□□ 14.9
SRRM1-207ENST00000468822 CDCA8Q53HL2 280 aa21.49■■□□□ 1.03
SRRM1-207ENST00000468822 POLKQ9UBT6 870 aa21.49■■□□□ 1.03
SRRM1-207ENST00000468822 KDRP35968 1356 aa21.48■■□□□ 1.03
SRRM1-207ENST00000468822 IFNL2Q8IZJ0 200 aa21.48■■□□□ 1.03
SRRM1-207ENST00000468822 KIF13BQ9NQT8 1826 aa21.46■■□□□ 1.03
SRRM1-207ENST00000468822 EIF4A2Q14240 407 aaKnown RBP21.46■■□□□ 1.03
SRRM1-207ENST00000468822 N4BP2Q86UW6 1770 aaPredicted RBP21.46■■□□□ 1.03
SRRM1-207ENST00000468822 A0A0G2JLW4 131 aa21.45■■□□□ 1.02
SRRM1-207ENST00000468822 C10orf71Q711Q0 1435 aa21.44■■□□□ 1.02
SRRM1-207ENST00000468822 TNNT2P45379 298 aaPredicted RBP21.42■■□□□ 1.02
SRRM1-207ENST00000468822 TRAPPC3LQ5T215 181 aa21.42■■□□□ 1.02
SRRM1-207ENST00000468822 ARHGEF1Q92888 912 aaKnown RBP21.42■■□□□ 1.02
SRRM1-207ENST00000468822 BCS1LQ9Y276 419 aa21.42■■□□□ 1.02
SRRM1-207ENST00000468822 RTCBQ9Y3I0 505 aaKnown RBP21.42■■□□□ 1.02
SRRM1-207ENST00000468822 TGFB2P61812 414 aa21.41■■□□□ 1.02
SRRM1-207ENST00000468822 COL5A3P25940 1745 aaPredicted RBP21.41■■□□□ 1.02
SRRM1-207ENST00000468822 GYS1P13807 737 aa21.4■■□□□ 1.02
SRRM1-207ENST00000468822 DPEP1P16444 411 aa21.4■■□□□ 1.02
SRRM1-207ENST00000468822 RBM42Q9BTD8 480 aaKnown RBP21.4■■□□□ 1.02
SRRM1-207ENST00000468822 KDM6AO15550 1401 aaPredicted RBP21.39■■□□□ 1.02
SRRM1-207ENST00000468822 NLGN1Q8N2Q7 840 aa21.39■■□□□ 1.01
SRRM1-207ENST00000468822 PCNTO95613 3336 aa21.39■■□□□ 1.01
SRRM1-207ENST00000468822 C4AP0C0L4 1744 aa21.38■■□□□ 1.01
SRRM1-207ENST00000468822 ZNF831Q5JPB2 1677 aa21.38■■□□□ 1.01
SRRM1-207ENST00000468822 MYH14Q7Z406 1995 aaKnown RBP21.38■■□□□ 1.01
SRRM1-207ENST00000468822 ERVV-2B6SEH9 535 aa21.38■■□□□ 1.01
SRRM1-207ENST00000468822 KCNA3P22001 575 aa21.38■■□□□ 1.01
SRRM1-207ENST00000468822 RC3H1Q5TC82 1133 aaKnown RBP21.38■■□□□ 1.01
SRRM1-207ENST00000468822 NMRK2Q9NPI5 230 aa21.38■■□□□ 1.01
SRRM1-207ENST00000468822 CNTNAP4Q9C0A0 1308 aa21.37■■□□□ 1.01
SRRM1-207ENST00000468822 ARHGAP27Q6ZUM4 889 aa21.37■■□□□ 1.01
SRRM1-207ENST00000468822 DNAJC5GQ8N7S2 189 aa21.37■■□□□ 1.01
SRRM1-207ENST00000468822 BRCA1P38398 1863 aaKnown RBP21.37■■□□□ 1.01
SRRM1-207ENST00000468822 RPS6KA4O75676 772 aa21.36■■□□□ 1.01
SRRM1-207ENST00000468822 DCAF5Q96JK2 942 aa21.36■■□□□ 1.01
SRRM1-207ENST00000468822 TOMM70O94826 608 aa21.35■■□□□ 1.01
SRRM1-207ENST00000468822 PLEKHG2Q9H7P9 1386 aa21.35■■□□□ 1.01
SRRM1-207ENST00000468822 FCHSD2O94868 740 aa21.34■■□□□ 1.01
SRRM1-207ENST00000468822 RFC4P35249 363 aa21.34■■□□□ 1.01
SRRM1-207ENST00000468822 APLP1P51693 650 aa21.34■■□□□ 1.01
SRRM1-207ENST00000468822 CCDC87Q9NVE4 849 aa21.34■■□□□ 1.01
SRRM1-207ENST00000468822 ZNF530Q6P9A1 599 aaPredicted RBP21.33■■□□□ 1.01
SRRM1-207ENST00000468822 AEBP1Q8IUX7 1158 aa21.33■■□□□ 1.01
SRRM1-207ENST00000468822 POLR3GLQ9BT43 218 aa21.33■■□□□ 1.01
SRRM1-207ENST00000468822 SRP68Q9UHB9 627 aaKnown RBP21.33■■□□□ 1.01
SRRM1-207ENST00000468822 PTCD1O75127 700 aaKnown RBP21.32■■□□□ 1
SRRM1-207ENST00000468822 DDR1Q08345 913 aa21.32■■□□□ 1
SRRM1-207ENST00000468822 PARP3Q9Y6F1 533 aa21.32■■□□□ 1
SRRM1-207ENST00000468822 HSP90AB1P08238 724 aaKnown RBP21.31■■□□□ 1
SRRM1-207ENST00000468822 CABP4P57796 275 aa21.31■■□□□ 1
SRRM1-207ENST00000468822 FKBP8Q14318 412 aa21.31■■□□□ 1
SRRM1-207ENST00000468822 PLEKHO1Q53GL0 409 aaPredicted RBP21.31■■□□□ 1
SRRM1-207ENST00000468822 C9orf131Q5VYM1 1079 aa21.31■■□□□ 1
SRRM1-207ENST00000468822 CRKLP46109 303 aaKnown RBP21.3■■□□□ 1
SRRM1-207ENST00000468822 HTRA3P83110 453 aa21.29■■□□□ 1
SRRM1-207ENST00000468822 NFATC2IPQ8NCF5 419 aa21.29■■□□□ 1
SRRM1-207ENST00000468822 ARFGEF1Q9Y6D6 1849 aa21.28■■□□□ 1
SRRM1-207ENST00000468822 TJP1Q07157 1748 aa21.28■■□□□ 1
SRRM1-207ENST00000468822 USP42Q9H9J4 1324 aaKnown RBP21.28■■□□□ 1
SRRM1-207ENST00000468822 CHRNA5P30532 468 aa21.27■■□□□ 1
SRRM1-207ENST00000468822 MTHFSP49914 203 aa21.27■■□□□ 1
SRRM1-207ENST00000468822 ADAMTS7Q9UKP4 1686 aa21.27■■□□□ 1
SRRM1-207ENST00000468822 KCPQ6ZWJ8 1503 aa21.26■□□□□ 0.99
SRRM1-207ENST00000468822 AMOTQ4VCS5 1084 aa21.26■□□□□ 0.99
SRRM1-207ENST00000468822 INTS5Q6P9B9 1019 aaKnown RBP21.26■□□□□ 0.99
SRRM1-207ENST00000468822 PANK3Q9H999 370 aa21.26■□□□□ 0.99
SRRM1-207ENST00000468822 PIM2Q9P1W9 311 aa21.26■□□□□ 0.99
SRRM1-207ENST00000468822 RBM46Q8TBY0 533 aaKnown RBP21.25■□□□□ 0.99
SRRM1-207ENST00000468822 WDR90Q96KV7 1748 aa21.24■□□□□ 0.99
SRRM1-207ENST00000468822 DALRD3Q5D0E6 543 aaKnown RBP21.24■□□□□ 0.99
SRRM1-207ENST00000468822 POLRMTO00411 1230 aaKnown RBP21.23■□□□□ 0.99
SRRM1-207ENST00000468822 TM4SF1P30408 202 aa21.22■□□□□ 0.99
SRRM1-207ENST00000468822 C1orf141Q5JVX7 400 aa21.22■□□□□ 0.99
SRRM1-207ENST00000468822 SULT6B1Q6IMI4 303 aa21.22■□□□□ 0.99
SRRM1-207ENST00000468822 RNF181Q9P0P0 153 aa21.22■□□□□ 0.99
SRRM1-207ENST00000468822 DNAJC10Q8IXB1 793 aa21.2■□□□□ 0.98
SRRM1-207ENST00000468822 RRAGCQ9HB90 399 aa21.2■□□□□ 0.98
SRRM1-207ENST00000468822 TIMELESSQ9UNS1 1208 aa21.2■□□□□ 0.98
SRRM1-207ENST00000468822 SCN11AQ9UI33 1791 aa21.19■□□□□ 0.98
SRRM1-207ENST00000468822 IL13P35225 146 aa21.19■□□□□ 0.98
SRRM1-207ENST00000468822 TRIM26Q12899 539 aaPredicted RBP21.19■□□□□ 0.98
SRRM1-207ENST00000468822 USPL1Q5W0Q7 1092 aa21.19■□□□□ 0.98
SRRM1-207ENST00000468822 KLRG1Q96E93 195 aa21.19■□□□□ 0.98
SRRM1-207ENST00000468822 LGR6Q9HBX8 967 aa21.19■□□□□ 0.98
SRRM1-207ENST00000468822 SBF1O95248 1867 aa21.19■□□□□ 0.98
SRRM1-207ENST00000468822 HSPA5P11021 654 aaKnown RBP21.18■□□□□ 0.98
SRRM1-207ENST00000468822 PRELPP51888 382 aa21.18■□□□□ 0.98
SRRM1-207ENST00000468822 RASSF7Q02833 373 aa21.18■□□□□ 0.98
SRRM1-207ENST00000468822 MORC1Q86VD1 984 aa21.18■□□□□ 0.98
SRRM1-207ENST00000468822 SOS1Q07889 1333 aaPredicted RBP21.18■□□□□ 0.98
SRRM1-207ENST00000468822 FSTL1Q12841 308 aa21.17■□□□□ 0.98
SRRM1-207ENST00000468822 C16orf71Q8IYS4 520 aaPredicted RBP21.17■□□□□ 0.98
SRRM1-207ENST00000468822 KDM2BQ8NHM5 1336 aa21.17■□□□□ 0.98
SRRM1-207ENST00000468822 SLC39A6Q13433 755 aa21.16■□□□□ 0.98
SRRM1-207ENST00000468822 COL13A1Q5TAT6 717 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms