RNA–Protein interactions for RNA: ENST00000468704.1

TMEM50A-202, Transcript of transmembrane protein 50A, humanhuman

TSL 3

Gene TMEM50A, Length 799 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-202ENST00000468704 CABP4P57796 275 aa23.17■■□□□ 1.3
TMEM50A-202ENST00000468704 AK7Q96M32 723 aa23.17■■□□□ 1.3
TMEM50A-202ENST00000468704 ATG3Q9NT62 314 aa23.17■■□□□ 1.3
TMEM50A-202ENST00000468704 MYH14Q7Z406 1995 aaKnown RBP23.17■■□□□ 1.3
TMEM50A-202ENST00000468704 FLAD1Q8NFF5 587 aa23.16■■□□□ 1.3
TMEM50A-202ENST00000468704 CFAP53Q96M91 514 aa23.16■■□□□ 1.3
TMEM50A-202ENST00000468704 ARXQ96QS3 562 aa23.16■■□□□ 1.3
TMEM50A-202ENST00000468704 SIPA1L3O60292 1781 aaPredicted RBP23.16■■□□□ 1.3
TMEM50A-202ENST00000468704 MAP3K5Q99683 1374 aa23.15■■□□□ 1.3
TMEM50A-202ENST00000468704 UBR2Q8IWV8 1755 aa23.15■■□□□ 1.3
TMEM50A-202ENST00000468704 MSH5O43196 834 aa23.15■■□□□ 1.3
TMEM50A-202ENST00000468704 POLD1P28340 1107 aa23.15■■□□□ 1.3
TMEM50A-202ENST00000468704 AKAP4Q5JQC9 854 aa23.15■■□□□ 1.3
TMEM50A-202ENST00000468704 COL23A1Q86Y22 540 aaPredicted RBP23.15■■□□□ 1.3
TMEM50A-202ENST00000468704 C4AP0C0L4 1744 aa23.15■■□□□ 1.3
TMEM50A-202ENST00000468704 CHD4Q14839 1912 aa23.14■■□□□ 1.3
TMEM50A-202ENST00000468704 U2SURPO15042 1029 aaKnown RBP23.14■■□□□ 1.29
TMEM50A-202ENST00000468704 FHDC1Q9C0D6 1143 aaPredicted RBP23.14■■□□□ 1.29
TMEM50A-202ENST00000468704 ATP6V1AP38606 617 aa23.13■■□□□ 1.29
TMEM50A-202ENST00000468704 LINC00116Q8NCU8 138 aa23.13■■□□□ 1.29
TMEM50A-202ENST00000468704 ITPK1Q13572 414 aa23.12■■□□□ 1.29
TMEM50A-202ENST00000468704 DCAF8L1A6NGE4 600 aa23.11■■□□□ 1.29
TMEM50A-202ENST00000468704 PPP2R1AP30153 589 aa23.11■■□□□ 1.29
TMEM50A-202ENST00000468704 SYT17Q9BSW7 474 aa23.1■■□□□ 1.29
TMEM50A-202ENST00000468704 SSFA2P28290 1259 aa23.09■■□□□ 1.29
TMEM50A-202ENST00000468704 MTHFSDQ2M296 383 aaKnown RBP23.09■■□□□ 1.29
TMEM50A-202ENST00000468704 RBM42Q9BTD8 480 aaKnown RBP23.09■■□□□ 1.29
TMEM50A-202ENST00000468704 NFATC2IPQ8NCF5 419 aa23.08■■□□□ 1.29
TMEM50A-202ENST00000468704 DLG5Q8TDM6 1919 aa23.08■■□□□ 1.28
TMEM50A-202ENST00000468704 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.07■■□□□ 1.28
TMEM50A-202ENST00000468704 GNPATO15228 680 aa23.07■■□□□ 1.28
TMEM50A-202ENST00000468704 PHF14O94880 888 aa23.07■■□□□ 1.28
TMEM50A-202ENST00000468704 AMIGO3Q86WK7 504 aa23.07■■□□□ 1.28
TMEM50A-202ENST00000468704 SLC52A2Q9HAB3 445 aa23.07■■□□□ 1.28
TMEM50A-202ENST00000468704 NUDCQ9Y266 331 aa23.07■■□□□ 1.28
TMEM50A-202ENST00000468704 RNMTO43148 476 aaKnown RBP23.06■■□□□ 1.28
TMEM50A-202ENST00000468704 MSL1Q68DK7 614 aa23.06■■□□□ 1.28
TMEM50A-202ENST00000468704 SLC4A9Q96Q91 983 aa23.06■■□□□ 1.28
TMEM50A-202ENST00000468704 KCPQ6ZWJ8 1503 aa23.05■■□□□ 1.28
TMEM50A-202ENST00000468704 GAS2L2Q8NHY3 880 aa23.05■■□□□ 1.28
TMEM50A-202ENST00000468704 CNTNAP4Q9C0A0 1308 aa23.05■■□□□ 1.28
TMEM50A-202ENST00000468704 KLHL34Q8N239 644 aa23.04■■□□□ 1.28
TMEM50A-202ENST00000468704 LGR6Q9HBX8 967 aa23.04■■□□□ 1.28
TMEM50A-202ENST00000468704 PTCD1O75127 700 aaKnown RBP23.03■■□□□ 1.28
TMEM50A-202ENST00000468704 RSPH6AQ9H0K4 717 aa23.03■■□□□ 1.28
TMEM50A-202ENST00000468704 RC3H1Q5TC82 1133 aaKnown RBP23.02■■□□□ 1.28
TMEM50A-202ENST00000468704 KIF13BQ9NQT8 1826 aa23.02■■□□□ 1.28
TMEM50A-202ENST00000468704 PRKAR2BP31323 418 aa23.01■■□□□ 1.27
TMEM50A-202ENST00000468704 SMIM5Q71RC9 77 aa23.01■■□□□ 1.27
TMEM50A-202ENST00000468704 RTCBQ9Y3I0 505 aaKnown RBP23.01■■□□□ 1.27
TMEM50A-202ENST00000468704 U2AF1L5P0DN76 240 aaPredicted RBP23■■□□□ 1.27
TMEM50A-202ENST00000468704 U2AF1Q01081 240 aaKnown RBP eCLIP23■■□□□ 1.27
TMEM50A-202ENST00000468704 GNAT3A8MTJ3 354 aa22.99■■□□□ 1.27
TMEM50A-202ENST00000468704 ADRA2BP18089 450 aa22.99■■□□□ 1.27
TMEM50A-202ENST00000468704 RPS6KA4O75676 772 aa22.96■■□□□ 1.27
TMEM50A-202ENST00000468704 CRKLP46109 303 aaKnown RBP22.96■■□□□ 1.27
TMEM50A-202ENST00000468704 TRAPPC3LQ5T215 181 aa22.96■■□□□ 1.27
TMEM50A-202ENST00000468704 FCHSD2O94868 740 aa22.95■■□□□ 1.26
TMEM50A-202ENST00000468704 TEFQ10587 303 aa22.95■■□□□ 1.26
TMEM50A-202ENST00000468704 SLC39A6Q13433 755 aa22.95■■□□□ 1.26
TMEM50A-202ENST00000468704 CEMIPQ8WUJ3 1361 aa22.95■■□□□ 1.26
TMEM50A-202ENST00000468704 PHACTR3Q96KR7 559 aa22.95■■□□□ 1.26
TMEM50A-202ENST00000468704 NLGN2Q8NFZ4 835 aa22.94■■□□□ 1.26
TMEM50A-202ENST00000468704 KIAA1551Q9HCM1 1747 aa22.94■■□□□ 1.26
TMEM50A-202ENST00000468704 YY1P25490 414 aa22.92■■□□□ 1.26
TMEM50A-202ENST00000468704 DNAJC10Q8IXB1 793 aa22.92■■□□□ 1.26
TMEM50A-202ENST00000468704 TTC5Q8N0Z6 440 aa22.92■■□□□ 1.26
TMEM50A-202ENST00000468704 IL17REQ8NFR9 667 aa22.92■■□□□ 1.26
TMEM50A-202ENST00000468704 ARHGEF1Q92888 912 aaKnown RBP22.92■■□□□ 1.26
TMEM50A-202ENST00000468704 CD2APQ9Y5K6 639 aa22.92■■□□□ 1.26
TMEM50A-202ENST00000468704 N4BP2Q86UW6 1770 aaPredicted RBP22.91■■□□□ 1.26
TMEM50A-202ENST00000468704 RFC4P35249 363 aa22.91■■□□□ 1.26
TMEM50A-202ENST00000468704 DDX10Q13206 875 aaKnown RBP22.91■■□□□ 1.26
TMEM50A-202ENST00000468704 RALBP1Q15311 655 aa22.91■■□□□ 1.26
TMEM50A-202ENST00000468704 BRCA1P38398 1863 aaKnown RBP22.9■■□□□ 1.26
TMEM50A-202ENST00000468704 VSIG10Q8N0Z9 540 aa22.9■■□□□ 1.26
TMEM50A-202ENST00000468704 CCDC87Q9NVE4 849 aa22.9■■□□□ 1.26
TMEM50A-202ENST00000468704 LAMB4A4D0S4 1761 aa22.9■■□□□ 1.26
TMEM50A-202ENST00000468704 SCN7AQ01118 1682 aa22.9■■□□□ 1.26
TMEM50A-202ENST00000468704 KDM3BQ7LBC6 1761 aa22.89■■□□□ 1.26
TMEM50A-202ENST00000468704 GPR162Q16538 588 aa22.89■■□□□ 1.25
TMEM50A-202ENST00000468704 AFDNP55196 1824 aaKnown RBP22.89■■□□□ 1.25
TMEM50A-202ENST00000468704 NEFMP07197 916 aa22.88■■□□□ 1.25
TMEM50A-202ENST00000468704 MMP10P09238 476 aa22.88■■□□□ 1.25
TMEM50A-202ENST00000468704 INTS5Q6P9B9 1019 aaKnown RBP22.88■■□□□ 1.25
TMEM50A-202ENST00000468704 NLGN1Q8N2Q7 840 aa22.88■■□□□ 1.25
TMEM50A-202ENST00000468704 GOLGB1Q14789 3259 aaKnown RBP22.88■■□□□ 1.25
TMEM50A-202ENST00000468704 CYP19A1P11511 503 aaPredicted RBP22.87■■□□□ 1.25
TMEM50A-202ENST00000468704 GYS1P13807 737 aa22.87■■□□□ 1.25
TMEM50A-202ENST00000468704 ZNF790Q6PG37 636 aa22.87■■□□□ 1.25
TMEM50A-202ENST00000468704 PELP1Q8IZL8 1130 aaKnown RBP22.87■■□□□ 1.25
TMEM50A-202ENST00000468704 RTF1Q92541 710 aaKnown RBP22.87■■□□□ 1.25
TMEM50A-202ENST00000468704 HEG1Q9ULI3 1381 aa22.87■■□□□ 1.25
TMEM50A-202ENST00000468704 SOS1Q07889 1333 aaPredicted RBP22.86■■□□□ 1.25
TMEM50A-202ENST00000468704 USP42Q9H9J4 1324 aaKnown RBP22.86■■□□□ 1.25
TMEM50A-202ENST00000468704 COL15A1P39059 1388 aa22.86■■□□□ 1.25
TMEM50A-202ENST00000468704 UTRNP46939 3433 aa22.86■■□□□ 1.25
TMEM50A-202ENST00000468704 C10orf71Q711Q0 1435 aa22.85■■□□□ 1.25
TMEM50A-202ENST00000468704 ZNF496Q96IT1 587 aaPredicted RBP22.85■■□□□ 1.25
TMEM50A-202ENST00000468704 BCORQ6W2J9 1755 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms