RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 MRPL50Q8N5N7 158 aaKnown RBP10.65□□□□□ -0.7
BRCA1-208ENST00000468300 BTG4Q9NY30 223 aa10.65□□□□□ -0.7
BRCA1-208ENST00000468300 CSB-PGBD3P0DP91 1061 aa10.65□□□□□ -0.7
BRCA1-208ENST00000468300 PHKG2P15735 406 aa10.65□□□□□ -0.7
BRCA1-208ENST00000468300 ELL2O00472 640 aaPredicted RBP10.64□□□□□ -0.71
BRCA1-208ENST00000468300 B4GALNT3Q6L9W6 998 aa10.64□□□□□ -0.71
BRCA1-208ENST00000468300 SLIT2O94813 1529 aa10.64□□□□□ -0.71
BRCA1-208ENST00000468300 PAPPAQ13219 1627 aa10.64□□□□□ -0.71
BRCA1-208ENST00000468300 PDE3AQ14432 1141 aa10.64□□□□□ -0.71
BRCA1-208ENST00000468300 TAF7Q15545 349 aaPredicted RBP10.64□□□□□ -0.71
BRCA1-208ENST00000468300 PANK1Q8TE04 598 aa10.64□□□□□ -0.71
BRCA1-208ENST00000468300 BABAM1Q9NWV8 329 aa10.64□□□□□ -0.71
BRCA1-208ENST00000468300 LRP6O75581 1613 aa10.64□□□□□ -0.71
BRCA1-208ENST00000468300 RGS12O14924 1447 aa10.64□□□□□ -0.71
BRCA1-208ENST00000468300 ZNF428Q96B54 188 aa10.64□□□□□ -0.71
BRCA1-208ENST00000468300 C5P01031 1676 aa10.64□□□□□ -0.71
BRCA1-208ENST00000468300 HEG1Q9ULI3 1381 aa10.64□□□□□ -0.71
BRCA1-208ENST00000468300 KCNQ3O43525 872 aa10.63□□□□□ -0.71
BRCA1-208ENST00000468300 TATP17735 454 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-208ENST00000468300 TOM1L2Q6ZVM7 507 aa10.63□□□□□ -0.71
BRCA1-208ENST00000468300 RAPGEF4Q8WZA2 1011 aa10.63□□□□□ -0.71
BRCA1-208ENST00000468300 TSPYL4Q9UJ04 414 aa10.63□□□□□ -0.71
BRCA1-208ENST00000468300 NOB1Q9ULX3 412 aaKnown RBP10.63□□□□□ -0.71
BRCA1-208ENST00000468300 TRIM27P14373 513 aa10.63□□□□□ -0.71
BRCA1-208ENST00000468300 STRN4Q9NRL3 753 aa10.63□□□□□ -0.71
BRCA1-208ENST00000468300 SMC4Q9NTJ3 1288 aa10.63□□□□□ -0.71
BRCA1-208ENST00000468300 FRAT1Q92837 279 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-208ENST00000468300 UBR2Q8IWV8 1755 aa10.62□□□□□ -0.71
BRCA1-208ENST00000468300 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-208ENST00000468300 TCERG1O14776 1098 aaKnown RBP10.61□□□□□ -0.71
BRCA1-208ENST00000468300 EIF4A1P60842 406 aaKnown RBP10.61□□□□□ -0.71
BRCA1-208ENST00000468300 C1orf141Q5JVX7 400 aa10.61□□□□□ -0.71
BRCA1-208ENST00000468300 PAXIP1Q6ZW49 1069 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-208ENST00000468300 SPG7Q9UQ90 795 aa10.61□□□□□ -0.71
BRCA1-208ENST00000468300 N4BP2Q86UW6 1770 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-208ENST00000468300 CACNA1FO60840 1977 aa10.6□□□□□ -0.71
BRCA1-208ENST00000468300 IL2RBP14784 551 aa10.6□□□□□ -0.71
BRCA1-208ENST00000468300 NKX1-1Q15270 411 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-208ENST00000468300 ATF7IPQ6VMQ6 1270 aa10.6□□□□□ -0.71
BRCA1-208ENST00000468300 BCL9LQ86UU0 1499 aa10.6□□□□□ -0.71
BRCA1-208ENST00000468300 JCADQ9P266 1359 aa10.6□□□□□ -0.71
BRCA1-208ENST00000468300 ADAMTS2O95450 1211 aa10.6□□□□□ -0.71
BRCA1-208ENST00000468300 ZKSCAN2Q63HK3 967 aa10.6□□□□□ -0.71
BRCA1-208ENST00000468300 IFNL2Q8IZJ0 200 aa10.6□□□□□ -0.71
BRCA1-208ENST00000468300 COG6Q9Y2V7 657 aa10.6□□□□□ -0.71
BRCA1-208ENST00000468300 ITGB4P16144 1822 aa10.6□□□□□ -0.71
BRCA1-208ENST00000468300 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.6□□□□□ -0.71
BRCA1-208ENST00000468300 EVA1CP58658 441 aa10.59□□□□□ -0.71
BRCA1-208ENST00000468300 SLC52A2Q9HAB3 445 aa10.59□□□□□ -0.71
BRCA1-208ENST00000468300 ZCRB1Q8TBF4 217 aaKnown RBP10.59□□□□□ -0.71
BRCA1-208ENST00000468300 ARHGAP45Q92619 1136 aa10.59□□□□□ -0.71
BRCA1-208ENST00000468300 CLUAP1Q96AJ1 413 aa10.59□□□□□ -0.71
BRCA1-208ENST00000468300 ABCC4O15439 1325 aa10.58□□□□□ -0.72
BRCA1-208ENST00000468300 KDM2BQ8NHM5 1336 aa10.58□□□□□ -0.72
BRCA1-208ENST00000468300 KIF16BQ96L93 1317 aa10.58□□□□□ -0.72
BRCA1-208ENST00000468300 BTBD11A6QL63 1104 aa10.58□□□□□ -0.72
BRCA1-208ENST00000468300 DCAF5Q96JK2 942 aa10.58□□□□□ -0.72
BRCA1-208ENST00000468300 SPATA31A1Q5TZJ5 1347 aa10.58□□□□□ -0.72
BRCA1-208ENST00000468300 PCDH11XQ9BZA7 1347 aa10.58□□□□□ -0.72
BRCA1-208ENST00000468300 PCDH11YQ9BZA8 1340 aa10.58□□□□□ -0.72
BRCA1-208ENST00000468300 NUTM2BA6NNL0 878 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-208ENST00000468300 NUTM2EB1AL46 878 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-208ENST00000468300 NUTM2AQ8IVF1 878 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-208ENST00000468300 DZIP1LQ8IYY4 767 aaKnown RBP10.58□□□□□ -0.72
BRCA1-208ENST00000468300 KCPQ6ZWJ8 1503 aa10.58□□□□□ -0.72
BRCA1-208ENST00000468300 PRAMEF22A3QJZ6 481 aa10.57□□□□□ -0.72
BRCA1-208ENST00000468300 MVPQ14764 893 aaKnown RBP10.57□□□□□ -0.72
BRCA1-208ENST00000468300 NFATC2IPQ8NCF5 419 aa10.57□□□□□ -0.72
BRCA1-208ENST00000468300 HSPA1LP34931 641 aa10.57□□□□□ -0.72
BRCA1-208ENST00000468300 G2E3Q7L622 706 aa10.57□□□□□ -0.72
BRCA1-208ENST00000468300 TMEM57Q8N5G2 664 aa10.57□□□□□ -0.72
BRCA1-208ENST00000468300 USP35Q9P2H5 1018 aa10.57□□□□□ -0.72
BRCA1-208ENST00000468300 SOS1Q07889 1333 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-208ENST00000468300 LAMB4A4D0S4 1761 aa10.57□□□□□ -0.72
BRCA1-208ENST00000468300 SPATA31A5Q5VU36 1347 aa10.56□□□□□ -0.72
BRCA1-208ENST00000468300 SPATA31A7Q8IWB4 1347 aa10.56□□□□□ -0.72
BRCA1-208ENST00000468300 TEFQ10587 303 aa10.56□□□□□ -0.72
BRCA1-208ENST00000468300 GIGYF1O75420 1035 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-208ENST00000468300 SLC39A6Q13433 755 aa10.55□□□□□ -0.72
BRCA1-208ENST00000468300 DOT1LQ8TEK3 1739 aa10.55□□□□□ -0.72
BRCA1-208ENST00000468300 TNS2Q63HR2 1409 aa10.55□□□□□ -0.72
BRCA1-208ENST00000468300 CANXP27824 592 aaKnown RBP10.55□□□□□ -0.72
BRCA1-208ENST00000468300 ZNF790Q6PG37 636 aa10.55□□□□□ -0.72
BRCA1-208ENST00000468300 PCDHB15Q9Y5E8 787 aa10.55□□□□□ -0.72
BRCA1-208ENST00000468300 SLC4A2P04920 1241 aa10.55□□□□□ -0.72
BRCA1-208ENST00000468300 FNBP4Q8N3X1 1017 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-208ENST00000468300 SPATA31A6Q5VVP1 1343 aa10.55□□□□□ -0.72
BRCA1-208ENST00000468300 THSD7AQ9UPZ6 1657 aa10.54□□□□□ -0.72
BRCA1-208ENST00000468300 IGHDP01880 384 aa10.54□□□□□ -0.72
BRCA1-208ENST00000468300 HOXB7P09629 217 aa10.54□□□□□ -0.72
BRCA1-208ENST00000468300 CNKSR2Q8WXI2 1034 aa10.54□□□□□ -0.72
BRCA1-208ENST00000468300 ZBTB7BO15156 539 aaPredicted RBP10.53□□□□□ -0.72
BRCA1-208ENST00000468300 IPO8O15397 1037 aaKnown RBP10.53□□□□□ -0.72
BRCA1-208ENST00000468300 HSP90AB1P08238 724 aaKnown RBP10.53□□□□□ -0.72
BRCA1-208ENST00000468300 ZBTB40Q9NUA8 1239 aa10.53□□□□□ -0.72
BRCA1-208ENST00000468300 ERVV-2B6SEH9 535 aa10.53□□□□□ -0.72
BRCA1-208ENST00000468300 PDIA6Q15084 440 aa10.53□□□□□ -0.72
BRCA1-208ENST00000468300 DDX54Q8TDD1 881 aaKnown RBP10.53□□□□□ -0.72
BRCA1-208ENST00000468300 NECTIN2Q92692 538 aa10.53□□□□□ -0.72
BRCA1-208ENST00000468300 THRAP3Q9Y2W1 955 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 394.7 ms