RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 ZNF831Q5JPB2 1677 aa17.03■□□□□ 0.32
UBR4-211ENST00000467272 POLKQ9UBT6 870 aa17.02■□□□□ 0.32
UBR4-211ENST00000467272 GNPATO15228 680 aa17.01■□□□□ 0.31
UBR4-211ENST00000467272 TMOD3Q9NYL9 352 aa17.01■□□□□ 0.31
UBR4-211ENST00000467272 C10orf71Q711Q0 1435 aa17.01■□□□□ 0.31
UBR4-211ENST00000467272 MMP10P09238 476 aa17■□□□□ 0.31
UBR4-211ENST00000467272 TGFB2P61812 414 aa17■□□□□ 0.31
UBR4-211ENST00000467272 IFNL2Q8IZJ0 200 aa17■□□□□ 0.31
UBR4-211ENST00000467272 ZNF526Q8TF50 670 aaPredicted RBP17■□□□□ 0.31
UBR4-211ENST00000467272 ATP6V1AP38606 617 aa16.99■□□□□ 0.31
UBR4-211ENST00000467272 RC3H1Q5TC82 1133 aaKnown RBP16.99■□□□□ 0.31
UBR4-211ENST00000467272 DNAJC5GQ8N7S2 189 aa16.99■□□□□ 0.31
UBR4-211ENST00000467272 EIF4A2Q14240 407 aaKnown RBP16.98■□□□□ 0.31
UBR4-211ENST00000467272 WWC3Q9ULE0 1092 aa16.98■□□□□ 0.31
UBR4-211ENST00000467272 ERVV-2B6SEH9 535 aa16.97■□□□□ 0.31
UBR4-211ENST00000467272 KCNA3P22001 575 aa16.97■□□□□ 0.31
UBR4-211ENST00000467272 NLGN1Q8N2Q7 840 aa16.97■□□□□ 0.31
UBR4-211ENST00000467272 GYS1P13807 737 aa16.96■□□□□ 0.31
UBR4-211ENST00000467272 ADRA2BP18089 450 aa16.96■□□□□ 0.31
UBR4-211ENST00000467272 KDM6AO15550 1401 aaPredicted RBP16.96■□□□□ 0.3
UBR4-211ENST00000467272 CNTNAP4Q9C0A0 1308 aa16.96■□□□□ 0.3
UBR4-211ENST00000467272 PPM1GO15355 546 aaPredicted RBP16.95■□□□□ 0.3
UBR4-211ENST00000467272 TRAPPC3LQ5T215 181 aa16.95■□□□□ 0.3
UBR4-211ENST00000467272 ARHGEF1Q92888 912 aaKnown RBP16.95■□□□□ 0.3
UBR4-211ENST00000467272 PCNTO95613 3336 aa16.95■□□□□ 0.3
UBR4-211ENST00000467272 COL5A3P25940 1745 aaPredicted RBP16.95■□□□□ 0.3
UBR4-211ENST00000467272 A0A0G2JLW4 131 aa16.94■□□□□ 0.3
UBR4-211ENST00000467272 RTCBQ9Y3I0 505 aaKnown RBP16.94■□□□□ 0.3
UBR4-211ENST00000467272 C4AP0C0L4 1744 aa16.93■□□□□ 0.3
UBR4-211ENST00000467272 RPS6KA4O75676 772 aa16.93■□□□□ 0.3
UBR4-211ENST00000467272 TOMM70O94826 608 aa16.93■□□□□ 0.3
UBR4-211ENST00000467272 DPEP1P16444 411 aa16.93■□□□□ 0.3
UBR4-211ENST00000467272 APLP1P51693 650 aa16.93■□□□□ 0.3
UBR4-211ENST00000467272 DCAF5Q96JK2 942 aa16.93■□□□□ 0.3
UBR4-211ENST00000467272 BRCA1P38398 1863 aaKnown RBP16.93■□□□□ 0.3
UBR4-211ENST00000467272 N4BP2Q86UW6 1770 aaPredicted RBP16.91■□□□□ 0.3
UBR4-211ENST00000467272 BCS1LQ9Y276 419 aa16.9■□□□□ 0.3
UBR4-211ENST00000467272 MYH14Q7Z406 1995 aaKnown RBP16.89■□□□□ 0.3
UBR4-211ENST00000467272 ADAMTS7Q9UKP4 1686 aa16.89■□□□□ 0.29
UBR4-211ENST00000467272 NMRK2Q9NPI5 230 aa16.89■□□□□ 0.29
UBR4-211ENST00000467272 CCDC87Q9NVE4 849 aa16.89■□□□□ 0.29
UBR4-211ENST00000467272 TIMELESSQ9UNS1 1208 aa16.89■□□□□ 0.29
UBR4-211ENST00000467272 HSP90AB1P08238 724 aaKnown RBP16.88■□□□□ 0.29
UBR4-211ENST00000467272 DDR1Q08345 913 aa16.87■□□□□ 0.29
UBR4-211ENST00000467272 ARHGAP27Q6ZUM4 889 aa16.87■□□□□ 0.29
UBR4-211ENST00000467272 RBM46Q8TBY0 533 aaKnown RBP16.87■□□□□ 0.29
UBR4-211ENST00000467272 RFC4P35249 363 aa16.86■□□□□ 0.29
UBR4-211ENST00000467272 AMOTQ4VCS5 1084 aa16.86■□□□□ 0.29
UBR4-211ENST00000467272 PLEKHO1Q53GL0 409 aaPredicted RBP16.86■□□□□ 0.29
UBR4-211ENST00000467272 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
UBR4-211ENST00000467272 USP42Q9H9J4 1324 aaKnown RBP16.86■□□□□ 0.29
UBR4-211ENST00000467272 ARFGEF1Q9Y6D6 1849 aa16.85■□□□□ 0.29
UBR4-211ENST00000467272 FCHSD2O94868 740 aa16.85■□□□□ 0.29
UBR4-211ENST00000467272 TM4SF1P30408 202 aa16.85■□□□□ 0.29
UBR4-211ENST00000467272 CRKLP46109 303 aaKnown RBP16.85■□□□□ 0.29
UBR4-211ENST00000467272 FKBP8Q14318 412 aa16.85■□□□□ 0.29
UBR4-211ENST00000467272 C9orf131Q5VYM1 1079 aa16.85■□□□□ 0.29
UBR4-211ENST00000467272 JMYQ8N9B5 988 aa16.85■□□□□ 0.29
UBR4-211ENST00000467272 PARP3Q9Y6F1 533 aa16.85■□□□□ 0.29
UBR4-211ENST00000467272 ZNF530Q6P9A1 599 aaPredicted RBP16.84■□□□□ 0.29
UBR4-211ENST00000467272 INTS5Q6P9B9 1019 aaKnown RBP16.84■□□□□ 0.29
UBR4-211ENST00000467272 AEBP1Q8IUX7 1158 aa16.84■□□□□ 0.29
UBR4-211ENST00000467272 PIM2Q9P1W9 311 aa16.84■□□□□ 0.29
UBR4-211ENST00000467272 TJP1Q07157 1748 aa16.84■□□□□ 0.29
UBR4-211ENST00000467272 TNNT2P45379 298 aaPredicted RBP16.83■□□□□ 0.28
UBR4-211ENST00000467272 CABP4P57796 275 aa16.83■□□□□ 0.28
UBR4-211ENST00000467272 NFATC2IPQ8NCF5 419 aa16.83■□□□□ 0.28
UBR4-211ENST00000467272 SRP68Q9UHB9 627 aaKnown RBP16.83■□□□□ 0.28
UBR4-211ENST00000467272 POLRMTO00411 1230 aaKnown RBP16.82■□□□□ 0.28
UBR4-211ENST00000467272 FSTL1Q12841 308 aa16.82■□□□□ 0.28
UBR4-211ENST00000467272 PTCD1O75127 700 aaKnown RBP16.81■□□□□ 0.28
UBR4-211ENST00000467272 MTHFSP49914 203 aa16.81■□□□□ 0.28
UBR4-211ENST00000467272 DALRD3Q5D0E6 543 aaKnown RBP16.81■□□□□ 0.28
UBR4-211ENST00000467272 WDR90Q96KV7 1748 aa16.81■□□□□ 0.28
UBR4-211ENST00000467272 IL13P35225 146 aa16.8■□□□□ 0.28
UBR4-211ENST00000467272 KLRG1Q96E93 195 aa16.8■□□□□ 0.28
UBR4-211ENST00000467272 PANK3Q9H999 370 aa16.8■□□□□ 0.28
UBR4-211ENST00000467272 KCPQ6ZWJ8 1503 aa16.8■□□□□ 0.28
UBR4-211ENST00000467272 MRC1P22897 1456 aa16.79■□□□□ 0.28
UBR4-211ENST00000467272 SOS1Q07889 1333 aaPredicted RBP16.78■□□□□ 0.28
UBR4-211ENST00000467272 CHRNA5P30532 468 aa16.78■□□□□ 0.28
UBR4-211ENST00000467272 PRELPP51888 382 aa16.78■□□□□ 0.28
UBR4-211ENST00000467272 ZC3H4Q9UPT8 1303 aaKnown RBP16.77■□□□□ 0.28
UBR4-211ENST00000467272 NRXN2Q9P2S2 1712 aa16.77■□□□□ 0.28
UBR4-211ENST00000467272 HTRA3P83110 453 aa16.77■□□□□ 0.28
UBR4-211ENST00000467272 KDM2BQ8NHM5 1336 aa16.76■□□□□ 0.27
UBR4-211ENST00000467272 CYP19A1P11511 503 aaPredicted RBP16.76■□□□□ 0.27
UBR4-211ENST00000467272 SULT6B1Q6IMI4 303 aa16.76■□□□□ 0.27
UBR4-211ENST00000467272 BCL2L12Q9HB09 334 aa16.76■□□□□ 0.27
UBR4-211ENST00000467272 RNF181Q9P0P0 153 aa16.76■□□□□ 0.27
UBR4-211ENST00000467272 CLSPNQ9HAW4 1339 aa16.75■□□□□ 0.27
UBR4-211ENST00000467272 SCN11AQ9UI33 1791 aa16.75■□□□□ 0.27
UBR4-211ENST00000467272 C1orf141Q5JVX7 400 aa16.75■□□□□ 0.27
UBR4-211ENST00000467272 DNAJC10Q8IXB1 793 aa16.75■□□□□ 0.27
UBR4-211ENST00000467272 SLC52A2Q9HAB3 445 aa16.75■□□□□ 0.27
UBR4-211ENST00000467272 SBF1O95248 1867 aa16.75■□□□□ 0.27
UBR4-211ENST00000467272 NFIXQ14938 502 aa16.74■□□□□ 0.27
UBR4-211ENST00000467272 AKAP4Q5JQC9 854 aa16.74■□□□□ 0.27
UBR4-211ENST00000467272 COL13A1Q5TAT6 717 aaPredicted RBP16.74■□□□□ 0.27
UBR4-211ENST00000467272 USPL1Q5W0Q7 1092 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms