RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 TEFQ10587 303 aa19.05■□□□□ 0.64
DNMT3A-208ENST00000466601 NEUROD2Q15784 382 aa19.05■□□□□ 0.64
DNMT3A-208ENST00000466601 SMARCC1Q92922 1105 aaPredicted RBP19.05■□□□□ 0.64
DNMT3A-208ENST00000466601 ATG3Q9NT62 314 aa19.04■□□□□ 0.64
DNMT3A-208ENST00000466601 ASAP1Q9ULH1 1129 aa19.04■□□□□ 0.64
DNMT3A-208ENST00000466601 MRC1P22897 1456 aa19.03■□□□□ 0.64
DNMT3A-208ENST00000466601 LMOD3Q0VAK6 560 aa19.03■□□□□ 0.64
DNMT3A-208ENST00000466601 TXNRD1Q16881 649 aa19.03■□□□□ 0.64
DNMT3A-208ENST00000466601 PROM2Q8N271 834 aa19.03■□□□□ 0.64
DNMT3A-208ENST00000466601 DLG5Q8TDM6 1919 aa19.03■□□□□ 0.64
DNMT3A-208ENST00000466601 VIRMAQ69YN4 1812 aaKnown RBP19.02■□□□□ 0.64
DNMT3A-208ENST00000466601 PALLDQ8WX93 1383 aa19.02■□□□□ 0.64
DNMT3A-208ENST00000466601 RGPD3A6NKT7 1758 aaPredicted RBP19.01■□□□□ 0.63
DNMT3A-208ENST00000466601 RGPD4Q7Z3J3 1758 aa19.01■□□□□ 0.63
DNMT3A-208ENST00000466601 THUMPD2Q9BTF0 503 aaKnown RBP19■□□□□ 0.63
DNMT3A-208ENST00000466601 TRIM35Q9UPQ4 493 aa19■□□□□ 0.63
DNMT3A-208ENST00000466601 SLC39A6Q13433 755 aa18.99■□□□□ 0.63
DNMT3A-208ENST00000466601 SLC27A3Q5K4L6 730 aa18.99■□□□□ 0.63
DNMT3A-208ENST00000466601 CCNL1Q9UK58 526 aaPredicted RBP18.99■□□□□ 0.63
DNMT3A-208ENST00000466601 TAF7Q15545 349 aaPredicted RBP18.98■□□□□ 0.63
DNMT3A-208ENST00000466601 LRRC4BQ9NT99 713 aa18.98■□□□□ 0.63
DNMT3A-208ENST00000466601 SENP3-EIF4A1A0A087X0R7 540 aa18.97■□□□□ 0.63
DNMT3A-208ENST00000466601 LOC102724428A0A0B4J2F2 783 aa18.97■□□□□ 0.63
DNMT3A-208ENST00000466601 BTBD11A6QL63 1104 aa18.97■□□□□ 0.63
DNMT3A-208ENST00000466601 KCNQ4P56696 695 aa18.97■□□□□ 0.63
DNMT3A-208ENST00000466601 SIK1P57059 783 aa18.97■□□□□ 0.63
DNMT3A-208ENST00000466601 RBM42Q9BTD8 480 aaKnown RBP18.97■□□□□ 0.63
DNMT3A-208ENST00000466601 LY75O60449 1722 aa18.97■□□□□ 0.63
DNMT3A-208ENST00000466601 RREB1Q92766 1687 aa18.96■□□□□ 0.63
DNMT3A-208ENST00000466601 PTCD1O75127 700 aaKnown RBP18.96■□□□□ 0.63
DNMT3A-208ENST00000466601 SIPA1L3O60292 1781 aaPredicted RBP18.96■□□□□ 0.63
DNMT3A-208ENST00000466601 ZNF790Q6PG37 636 aa18.95■□□□□ 0.62
DNMT3A-208ENST00000466601 TTC5Q8N0Z6 440 aa18.95■□□□□ 0.62
DNMT3A-208ENST00000466601 ATP6V1AP38606 617 aa18.94■□□□□ 0.62
DNMT3A-208ENST00000466601 NCBP3Q53F19 620 aaKnown RBP18.94■□□□□ 0.62
DNMT3A-208ENST00000466601 KCNQ3O43525 872 aa18.93■□□□□ 0.62
DNMT3A-208ENST00000466601 CCDC27Q2M243 656 aa18.93■□□□□ 0.62
DNMT3A-208ENST00000466601 NBPF14Q5TI25 921 aa18.93■□□□□ 0.62
DNMT3A-208ENST00000466601 SLC4A9Q96Q91 983 aa18.93■□□□□ 0.62
DNMT3A-208ENST00000466601 MIS18AQ9NYP9 233 aa18.93■□□□□ 0.62
DNMT3A-208ENST00000466601 NUP188Q5SRE5 1749 aa18.93■□□□□ 0.62
DNMT3A-208ENST00000466601 PAPPAQ13219 1627 aa18.92■□□□□ 0.62
DNMT3A-208ENST00000466601 HMGB2P26583 209 aaKnown RBP18.92■□□□□ 0.62
DNMT3A-208ENST00000466601 SALL2Q9Y467 1007 aaPredicted RBP18.92■□□□□ 0.62
DNMT3A-208ENST00000466601 ITPK1Q13572 414 aa18.91■□□□□ 0.62
DNMT3A-208ENST00000466601 NGEFQ8N5V2 710 aa18.91■□□□□ 0.62
DNMT3A-208ENST00000466601 KCPQ6ZWJ8 1503 aa18.9■□□□□ 0.62
DNMT3A-208ENST00000466601 CALD1Q05682 793 aaKnown RBP18.9■□□□□ 0.62
DNMT3A-208ENST00000466601 WWC1Q8IX03 1113 aa18.9■□□□□ 0.62
DNMT3A-208ENST00000466601 ZNF496Q96IT1 587 aaPredicted RBP18.9■□□□□ 0.62
DNMT3A-208ENST00000466601 FMNL2Q96PY5 1086 aa18.9■□□□□ 0.62
DNMT3A-208ENST00000466601 ANO8Q9HCE9 1232 aaPredicted RBP18.9■□□□□ 0.62
DNMT3A-208ENST00000466601 BABAM1Q9NWV8 329 aa18.9■□□□□ 0.62
DNMT3A-208ENST00000466601 STK32BQ9NY57 414 aa18.9■□□□□ 0.62
DNMT3A-208ENST00000466601 TSPYL4Q9UJ04 414 aa18.9■□□□□ 0.62
DNMT3A-208ENST00000466601 LAS1LQ9Y4W2 734 aaKnown RBP18.9■□□□□ 0.62
DNMT3A-208ENST00000466601 VSIG10Q8N0Z9 540 aa18.89■□□□□ 0.61
DNMT3A-208ENST00000466601 CHL1O00533 1208 aa18.88■□□□□ 0.61
DNMT3A-208ENST00000466601 SLC15A2Q16348 729 aa18.88■□□□□ 0.61
DNMT3A-208ENST00000466601 LINC00116Q8NCU8 138 aa18.88■□□□□ 0.61
DNMT3A-208ENST00000466601 AKT1S1Q96B36 256 aa18.88■□□□□ 0.61
DNMT3A-208ENST00000466601 HEG1Q9ULI3 1381 aa18.88■□□□□ 0.61
DNMT3A-208ENST00000466601 ZNF827Q17R98 1081 aa18.87■□□□□ 0.61
DNMT3A-208ENST00000466601 ZNF831Q5JPB2 1677 aa18.87■□□□□ 0.61
DNMT3A-208ENST00000466601 UBR2Q8IWV8 1755 aa18.87■□□□□ 0.61
DNMT3A-208ENST00000466601 DNAJC10Q8IXB1 793 aa18.87■□□□□ 0.61
DNMT3A-208ENST00000466601 CFAP44Q96MT7 982 aa18.87■□□□□ 0.61
DNMT3A-208ENST00000466601 EIF4A1P60842 406 aaKnown RBP18.86■□□□□ 0.61
DNMT3A-208ENST00000466601 R3HDM1Q15032 1099 aaKnown RBP18.86■□□□□ 0.61
DNMT3A-208ENST00000466601 IFT57Q9NWB7 429 aa18.86■□□□□ 0.61
DNMT3A-208ENST00000466601 TAF1LQ8IZX4 1826 aa18.86■□□□□ 0.61
DNMT3A-208ENST00000466601 C5P01031 1676 aa18.85■□□□□ 0.61
DNMT3A-208ENST00000466601 ZNF853P0CG23 659 aa18.85■□□□□ 0.61
DNMT3A-208ENST00000466601 GNAI1P63096 354 aa18.85■□□□□ 0.61
DNMT3A-208ENST00000466601 KDM3BQ7LBC6 1761 aa18.85■□□□□ 0.61
DNMT3A-208ENST00000466601 PSDA5PKW4 1024 aaPredicted RBP18.84■□□□□ 0.61
DNMT3A-208ENST00000466601 SNRPA1P09661 255 aaKnown RBP18.84■□□□□ 0.61
DNMT3A-208ENST00000466601 WDR63Q8IWG1 891 aa18.84■□□□□ 0.61
DNMT3A-208ENST00000466601 AK7Q96M32 723 aa18.84■□□□□ 0.61
DNMT3A-208ENST00000466601 TEX13AQ9BXU3 409 aaPredicted RBP18.84■□□□□ 0.61
DNMT3A-208ENST00000466601 TFCP2L1Q9NZI6 479 aa18.84■□□□□ 0.61
DNMT3A-208ENST00000466601 C4BP0C0L5 1744 aa18.83■□□□□ 0.61
DNMT3A-208ENST00000466601 CNTNAP4Q9C0A0 1308 aa18.83■□□□□ 0.61
DNMT3A-208ENST00000466601 CYP19A1P11511 503 aaPredicted RBP18.83■□□□□ 0.6
DNMT3A-208ENST00000466601 RC3H1Q5TC82 1133 aaKnown RBP18.83■□□□□ 0.6
DNMT3A-208ENST00000466601 MBIPQ9NS73 344 aa18.83■□□□□ 0.6
DNMT3A-208ENST00000466601 TJP1Q07157 1748 aa18.83■□□□□ 0.6
DNMT3A-208ENST00000466601 CICQ96RK0 1608 aaPredicted RBP18.82■□□□□ 0.6
DNMT3A-208ENST00000466601 IL16Q14005 1332 aa18.82■□□□□ 0.6
DNMT3A-208ENST00000466601 STARD3NLO95772 234 aa18.82■□□□□ 0.6
DNMT3A-208ENST00000466601 CRKLP46109 303 aaKnown RBP18.82■□□□□ 0.6
DNMT3A-208ENST00000466601 PRAMEF22A3QJZ6 481 aa18.81■□□□□ 0.6
DNMT3A-208ENST00000466601 GIGYF1O75420 1035 aaPredicted RBP18.81■□□□□ 0.6
DNMT3A-208ENST00000466601 USP16Q9Y5T5 823 aa18.81■□□□□ 0.6
DNMT3A-208ENST00000466601 COL5A3P25940 1745 aaPredicted RBP18.8■□□□□ 0.6
DNMT3A-208ENST00000466601 ZNF521Q96K83 1311 aa18.8■□□□□ 0.6
DNMT3A-208ENST00000466601 GNPATO15228 680 aa18.8■□□□□ 0.6
DNMT3A-208ENST00000466601 INTS5Q6P9B9 1019 aaKnown RBP18.8■□□□□ 0.6
DNMT3A-208ENST00000466601 CCDC87Q9NVE4 849 aa18.8■□□□□ 0.6
DNMT3A-208ENST00000466601 PNPLA7Q6ZV29 1317 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms