RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 TOGARAM1Q9Y4F4 1720 aa13.07□□□□□ -0.32
ABCF3-205ENST00000466416 SMG6Q86US8 1419 aaKnown RBP13.06□□□□□ -0.32
ABCF3-205ENST00000466416 KCNA3P22001 575 aa13.06□□□□□ -0.32
ABCF3-205ENST00000466416 ATP6V1AP38606 617 aa13.06□□□□□ -0.32
ABCF3-205ENST00000466416 NKX1-1Q15270 411 aaPredicted RBP13.06□□□□□ -0.32
ABCF3-205ENST00000466416 KCPQ6ZWJ8 1503 aa13.06□□□□□ -0.32
ABCF3-205ENST00000466416 KIF13BQ9NQT8 1826 aa13.06□□□□□ -0.32
ABCF3-205ENST00000466416 ITPK1Q13572 414 aa13.05□□□□□ -0.32
ABCF3-205ENST00000466416 DALRD3Q5D0E6 543 aaKnown RBP13.05□□□□□ -0.32
ABCF3-205ENST00000466416 DCAF5Q96JK2 942 aa13.05□□□□□ -0.32
ABCF3-205ENST00000466416 RTCBQ9Y3I0 505 aaKnown RBP13.05□□□□□ -0.32
ABCF3-205ENST00000466416 PARP3Q9Y6F1 533 aa13.05□□□□□ -0.32
ABCF3-205ENST00000466416 ADRA2BP18089 450 aa13.04□□□□□ -0.32
ABCF3-205ENST00000466416 PCDH10Q9P2E7 1040 aa13.04□□□□□ -0.32
ABCF3-205ENST00000466416 ZC3H4Q9UPT8 1303 aaKnown RBP13.04□□□□□ -0.32
ABCF3-205ENST00000466416 RGPD2P0DJD1 1756 aa13.04□□□□□ -0.32
ABCF3-205ENST00000466416 N4BP2Q86UW6 1770 aaPredicted RBP13.04□□□□□ -0.32
ABCF3-205ENST00000466416 KIAA1551Q9HCM1 1747 aa13.03□□□□□ -0.32
ABCF3-205ENST00000466416 VEGFAP15692 232 aaPredicted RBP13.03□□□□□ -0.32
ABCF3-205ENST00000466416 RRS1Q15050 365 aaKnown RBP13.03□□□□□ -0.32
ABCF3-205ENST00000466416 TMOD3Q9NYL9 352 aa13.03□□□□□ -0.32
ABCF3-205ENST00000466416 GYS1P13807 737 aa13.02□□□□□ -0.33
ABCF3-205ENST00000466416 RC3H1Q5TC82 1133 aaKnown RBP13.02□□□□□ -0.33
ABCF3-205ENST00000466416 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.33
ABCF3-205ENST00000466416 ASAP1Q9ULH1 1129 aa13.02□□□□□ -0.33
ABCF3-205ENST00000466416 SPG7Q9UQ90 795 aa13.02□□□□□ -0.33
ABCF3-205ENST00000466416 RFC4P35249 363 aa13.01□□□□□ -0.33
ABCF3-205ENST00000466416 HSP90AB2PQ58FF8 381 aa13.01□□□□□ -0.33
ABCF3-205ENST00000466416 INSRP06213 1382 aa13.01□□□□□ -0.33
ABCF3-205ENST00000466416 MAP2P11137 1827 aaKnown RBP13□□□□□ -0.33
ABCF3-205ENST00000466416 GLTPD2A6NH11 291 aa13□□□□□ -0.33
ABCF3-205ENST00000466416 CARD11Q9BXL7 1154 aa13□□□□□ -0.33
ABCF3-205ENST00000466416 PRDM10Q9NQV6 1147 aa13□□□□□ -0.33
ABCF3-205ENST00000466416 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13□□□□□ -0.33
ABCF3-205ENST00000466416 ITGB4P16144 1822 aa12.99□□□□□ -0.33
ABCF3-205ENST00000466416 TNRC6CQ9HCJ0 1690 aaKnown RBP12.99□□□□□ -0.33
ABCF3-205ENST00000466416 RPS6KA4O75676 772 aa12.99□□□□□ -0.33
ABCF3-205ENST00000466416 ATG3Q9NT62 314 aa12.99□□□□□ -0.33
ABCF3-205ENST00000466416 ARFGEF1Q9Y6D6 1849 aa12.99□□□□□ -0.33
ABCF3-205ENST00000466416 KIF24Q5T7B8 1368 aa12.98□□□□□ -0.33
ABCF3-205ENST00000466416 FYB1O15117 783 aa12.98□□□□□ -0.33
ABCF3-205ENST00000466416 BRCA1P38398 1863 aaKnown RBP12.97□□□□□ -0.33
ABCF3-205ENST00000466416 FLT4P35916 1363 aa12.97□□□□□ -0.33
ABCF3-205ENST00000466416 PKD1L3Q7Z443 1732 aa12.97□□□□□ -0.33
ABCF3-205ENST00000466416 SLC24A1O60721 1099 aa12.97□□□□□ -0.33
ABCF3-205ENST00000466416 LMNB1P20700 586 aa12.97□□□□□ -0.33
ABCF3-205ENST00000466416 C4AP0C0L4 1744 aa12.96□□□□□ -0.33
ABCF3-205ENST00000466416 CNTNAP4Q9C0A0 1308 aa12.96□□□□□ -0.33
ABCF3-205ENST00000466416 IFNL2Q8IZJ0 200 aa12.96□□□□□ -0.33
ABCF3-205ENST00000466416 GGNBP2Q9H3C7 697 aa12.96□□□□□ -0.33
ABCF3-205ENST00000466416 CREBZFQ9NS37 354 aa12.96□□□□□ -0.33
ABCF3-205ENST00000466416 FOXN1O15353 648 aa12.95□□□□□ -0.34
ABCF3-205ENST00000466416 CHRNA5P30532 468 aa12.95□□□□□ -0.34
ABCF3-205ENST00000466416 SIN3AQ96ST3 1273 aa12.95□□□□□ -0.34
ABCF3-205ENST00000466416 RBM42Q9BTD8 480 aaKnown RBP12.95□□□□□ -0.34
ABCF3-205ENST00000466416 KDM6AO15550 1401 aaPredicted RBP12.95□□□□□ -0.34
ABCF3-205ENST00000466416 PHKG2P15735 406 aa12.94□□□□□ -0.34
ABCF3-205ENST00000466416 CTCFP49711 727 aaPredicted RBP12.94□□□□□ -0.34
ABCF3-205ENST00000466416 DPY19L2Q6NUT2 758 aa12.94□□□□□ -0.34
ABCF3-205ENST00000466416 SLC4A9Q96Q91 983 aa12.94□□□□□ -0.34
ABCF3-205ENST00000466416 KDRP35968 1356 aa12.94□□□□□ -0.34
ABCF3-205ENST00000466416 SBF1O95248 1867 aa12.93□□□□□ -0.34
ABCF3-205ENST00000466416 ERVV-2B6SEH9 535 aa12.93□□□□□ -0.34
ABCF3-205ENST00000466416 RASSF7Q02833 373 aa12.93□□□□□ -0.34
ABCF3-205ENST00000466416 NEUROD1Q13562 356 aa12.93□□□□□ -0.34
ABCF3-205ENST00000466416 AIDAQ96BJ3 306 aa12.93□□□□□ -0.34
ABCF3-205ENST00000466416 MKRN1Q9UHC7 482 aaKnown RBP12.93□□□□□ -0.34
ABCF3-205ENST00000466416 TONSLQ96HA7 1378 aa12.93□□□□□ -0.34
ABCF3-205ENST00000466416 POTECB2RU33 542 aa12.92□□□□□ -0.34
ABCF3-205ENST00000466416 DDR1Q08345 913 aa12.92□□□□□ -0.34
ABCF3-205ENST00000466416 FKBP8Q14318 412 aa12.92□□□□□ -0.34
ABCF3-205ENST00000466416 NCAPD2Q15021 1401 aa12.92□□□□□ -0.34
ABCF3-205ENST00000466416 TM4SF1P30408 202 aa12.91□□□□□ -0.34
ABCF3-205ENST00000466416 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
ABCF3-205ENST00000466416 USP42Q9H9J4 1324 aaKnown RBP12.9□□□□□ -0.34
ABCF3-205ENST00000466416 POLRMTO00411 1230 aaKnown RBP12.9□□□□□ -0.34
ABCF3-205ENST00000466416 FAM161AQ3B820 660 aa12.9□□□□□ -0.34
ABCF3-205ENST00000466416 TESK2Q96S53 571 aa12.9□□□□□ -0.34
ABCF3-205ENST00000466416 SRP68Q9UHB9 627 aaKnown RBP12.9□□□□□ -0.34
ABCF3-205ENST00000466416 HSP90AB1P08238 724 aaKnown RBP12.89□□□□□ -0.35
ABCF3-205ENST00000466416 TTLL6Q8N841 843 aa12.89□□□□□ -0.35
ABCF3-205ENST00000466416 EYA1Q99502 592 aa12.89□□□□□ -0.35
ABCF3-205ENST00000466416 EMILIN1Q9Y6C2 1016 aa12.89□□□□□ -0.35
ABCF3-205ENST00000466416 CNTNAP1P78357 1384 aa12.89□□□□□ -0.35
ABCF3-205ENST00000466416 ZNF831Q5JPB2 1677 aa12.89□□□□□ -0.35
ABCF3-205ENST00000466416 CRKLP46109 303 aaKnown RBP12.88□□□□□ -0.35
ABCF3-205ENST00000466416 ABHD8Q96I13 439 aa12.88□□□□□ -0.35
ABCF3-205ENST00000466416 WBP1LQ9NX94 342 aa12.88□□□□□ -0.35
ABCF3-205ENST00000466416 WASHC2AQ641Q2 1341 aa12.88□□□□□ -0.35
ABCF3-205ENST00000466416 ZPR1O75312 459 aa12.87□□□□□ -0.35
ABCF3-205ENST00000466416 LBX1P52954 281 aa12.87□□□□□ -0.35
ABCF3-205ENST00000466416 MLLT1Q03111 559 aaPredicted RBP12.87□□□□□ -0.35
ABCF3-205ENST00000466416 ST20-MTHFSA0A0A6YYL1 179 aa12.86□□□□□ -0.35
ABCF3-205ENST00000466416 PPM1GO15355 546 aaPredicted RBP12.86□□□□□ -0.35
ABCF3-205ENST00000466416 RGS19P49795 217 aa12.86□□□□□ -0.35
ABCF3-205ENST00000466416 CABP4P57796 275 aa12.86□□□□□ -0.35
ABCF3-205ENST00000466416 NFKBIEO00221 500 aa12.85□□□□□ -0.35
ABCF3-205ENST00000466416 PTCD1O75127 700 aaKnown RBP12.85□□□□□ -0.35
ABCF3-205ENST00000466416 VEGFBP49765 207 aa12.85□□□□□ -0.35
ABCF3-205ENST00000466416 ERFEQ4G0M1 354 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms