RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 F11P03951 625 aa12.08□□□□□ -0.48
SSB-207ENST00000465871 GAS6Q14393 721 aa12.08□□□□□ -0.48
SSB-207ENST00000465871 EML3Q32P44 896 aa12.08□□□□□ -0.48
SSB-207ENST00000465871 A0A1B0GTH6 734 aa12.07□□□□□ -0.48
SSB-207ENST00000465871 LZTS3O60299 673 aaPredicted RBP12.07□□□□□ -0.48
SSB-207ENST00000465871 SLURP2P0DP57 97 aa12.07□□□□□ -0.48
SSB-207ENST00000465871 PHKA2P46019 1235 aa12.07□□□□□ -0.48
SSB-207ENST00000465871 C4orf17Q53FE4 359 aa12.07□□□□□ -0.48
SSB-207ENST00000465871 FOXR1Q6PIV2 292 aa12.07□□□□□ -0.48
SSB-207ENST00000465871 PPARGC1BQ86YN6 1023 aaKnown RBP12.07□□□□□ -0.48
SSB-207ENST00000465871 RHBDD1Q8TEB9 315 aa12.07□□□□□ -0.48
SSB-207ENST00000465871 ADAMTS19Q8TE59 1207 aa12.06□□□□□ -0.48
SSB-207ENST00000465871 NCOA4Q13772 614 aa12.05□□□□□ -0.48
SSB-207ENST00000465871 NUCKS1Q9H1E3 243 aaKnown RBP12.05□□□□□ -0.48
SSB-207ENST00000465871 NOD1Q9Y239 953 aa12.05□□□□□ -0.48
SSB-207ENST00000465871 USP17L5A8MUK1 530 aa12.04□□□□□ -0.48
SSB-207ENST00000465871 GPR25O00155 361 aa12.04□□□□□ -0.48
SSB-207ENST00000465871 SRSF11Q05519 484 aaKnown RBP12.04□□□□□ -0.48
SSB-207ENST00000465871 GTPBP3Q969Y2 492 aaKnown RBP12.04□□□□□ -0.48
SSB-207ENST00000465871 PCDHGA11Q9Y5H2 935 aa12.04□□□□□ -0.48
SSB-207ENST00000465871 TMEM229AB2RXF0 380 aa12.03□□□□□ -0.48
SSB-207ENST00000465871 ZNF385CQ66K41 422 aaPredicted RBP12.03□□□□□ -0.48
SSB-207ENST00000465871 CLUAP1Q96AJ1 413 aa12.03□□□□□ -0.48
SSB-207ENST00000465871 TRERF1Q96PN7 1200 aa12.03□□□□□ -0.48
SSB-207ENST00000465871 GPAMQ9HCL2 828 aa12.03□□□□□ -0.48
SSB-207ENST00000465871 MBIPQ9NS73 344 aa12.03□□□□□ -0.48
SSB-207ENST00000465871 ADAMTS2O95450 1211 aa12.02□□□□□ -0.49
SSB-207ENST00000465871 SMTNP53814 917 aa12.02□□□□□ -0.49
SSB-207ENST00000465871 SVOPQ8N4V2 548 aa12.02□□□□□ -0.49
SSB-207ENST00000465871 GTF2IP78347 998 aa12.01□□□□□ -0.49
SSB-207ENST00000465871 PROSER2Q86WR7 435 aaPredicted RBP12.01□□□□□ -0.49
SSB-207ENST00000465871 THBS1P07996 1170 aa12□□□□□ -0.49
SSB-207ENST00000465871 HDGFL1Q5TGJ6 251 aa12□□□□□ -0.49
SSB-207ENST00000465871 DEPDC4Q8N2C3 294 aa12□□□□□ -0.49
SSB-207ENST00000465871 FNBP4Q8N3X1 1017 aaPredicted RBP12□□□□□ -0.49
SSB-207ENST00000465871 WHAMMQ8TF30 809 aa12□□□□□ -0.49
SSB-207ENST00000465871 SLC4A9Q96Q91 983 aa12□□□□□ -0.49
SSB-207ENST00000465871 UCN2Q96RP3 112 aa12□□□□□ -0.49
SSB-207ENST00000465871 SERTAD1Q9UHV2 236 aa12□□□□□ -0.49
SSB-207ENST00000465871 MSX1P28360 303 aa11.99□□□□□ -0.49
SSB-207ENST00000465871 PLA2G4AP47712 749 aa11.99□□□□□ -0.49
SSB-207ENST00000465871 LBRQ14739 615 aaKnown RBP11.99□□□□□ -0.49
SSB-207ENST00000465871 CSB-PGBD3P0DP91 1061 aa11.98□□□□□ -0.49
SSB-207ENST00000465871 PSME1Q06323 249 aa11.98□□□□□ -0.49
SSB-207ENST00000465871 MTFR1Q15390 333 aa11.98□□□□□ -0.49
SSB-207ENST00000465871 PLEKHM2Q8IWE5 1019 aa11.98□□□□□ -0.49
SSB-207ENST00000465871 PGBD3Q8N328 593 aa11.98□□□□□ -0.49
SSB-207ENST00000465871 USP17L3A6NCW0 530 aa11.97□□□□□ -0.49
SSB-207ENST00000465871 USP17L4A6NCW7 530 aa11.97□□□□□ -0.49
SSB-207ENST00000465871 A6NJY4 79 aa11.97□□□□□ -0.49
SSB-207ENST00000465871 USP17L2Q6R6M4 530 aa11.97□□□□□ -0.49
SSB-207ENST00000465871 TBC1D9Q6ZT07 1266 aa11.97□□□□□ -0.49
SSB-207ENST00000465871 USP17L1Q7RTZ2 530 aa11.97□□□□□ -0.49
SSB-207ENST00000465871 NIFKQ9BYG3 293 aaKnown RBP11.97□□□□□ -0.49
SSB-207ENST00000465871 RUBCNLQ9H714 662 aa11.97□□□□□ -0.49
SSB-207ENST00000465871 IGF1RP08069 1367 aa11.96□□□□□ -0.49
SSB-207ENST00000465871 BACH1O14867 736 aa11.96□□□□□ -0.49
SSB-207ENST00000465871 ATP9BO43861 1147 aa11.96□□□□□ -0.49
SSB-207ENST00000465871 TRIM50Q86XT4 487 aa11.96□□□□□ -0.49
SSB-207ENST00000465871 IQSEC3Q9UPP2 1182 aaPredicted RBP11.96□□□□□ -0.49
SSB-207ENST00000465871 ZNF295-AS1Q8N0V1 137 aa11.95□□□□□ -0.5
SSB-207ENST00000465871 GLMNQ92990 594 aa11.95□□□□□ -0.5
SSB-207ENST00000465871 CFHR5Q9BXR6 569 aa11.95□□□□□ -0.5
SSB-207ENST00000465871 CRISPLD1Q9H336 500 aa11.95□□□□□ -0.5
SSB-207ENST00000465871 ADAMTS8Q9UP79 889 aa11.95□□□□□ -0.5
SSB-207ENST00000465871 CDK2AP1O14519 115 aa11.94□□□□□ -0.5
SSB-207ENST00000465871 ARHGEF15O94989 841 aa11.94□□□□□ -0.5
SSB-207ENST00000465871 MX2P20592 715 aa11.94□□□□□ -0.5
SSB-207ENST00000465871 UBAP2LQ14157 1087 aaKnown RBP11.94□□□□□ -0.5
SSB-207ENST00000465871 EFHC2Q5JST6 749 aa11.94□□□□□ -0.5
SSB-207ENST00000465871 LYPD4Q6UWN0 246 aa11.94□□□□□ -0.5
SSB-207ENST00000465871 C1orf216Q8TAB5 229 aa11.94□□□□□ -0.5
SSB-207ENST00000465871 ZNF358Q9NW07 568 aa11.94□□□□□ -0.5
SSB-207ENST00000465871 PHF24Q9UPV7 400 aa11.94□□□□□ -0.5
SSB-207ENST00000465871 ATP4AP20648 1035 aa11.93□□□□□ -0.5
SSB-207ENST00000465871 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.93□□□□□ -0.5
SSB-207ENST00000465871 USP3Q9Y6I4 520 aa11.93□□□□□ -0.5
SSB-207ENST00000465871 A6NJR5 290 aa11.92□□□□□ -0.5
SSB-207ENST00000465871 CELA2BP08218 269 aaPredicted RBP11.92□□□□□ -0.5
SSB-207ENST00000465871 ATP1A2P50993 1020 aa11.92□□□□□ -0.5
SSB-207ENST00000465871 MAP3K10Q02779 954 aa11.92□□□□□ -0.5
SSB-207ENST00000465871 NSFL1CQ9UNZ2 370 aaKnown RBP11.92□□□□□ -0.5
SSB-207ENST00000465871 NBPF1Q3BBV0 1214 aa11.91□□□□□ -0.5
SSB-207ENST00000465871 SCHIP1Q9P0W5 487 aaPredicted RBP11.91□□□□□ -0.5
SSB-207ENST00000465871 AIDAQ96BJ3 306 aa11.9□□□□□ -0.5
SSB-207ENST00000465871 KIAA1024Q9UPX6 916 aa11.9□□□□□ -0.5
SSB-207ENST00000465871 RNF225M0QZC1 329 aaPredicted RBP11.89□□□□□ -0.51
SSB-207ENST00000465871 CLDN10P78369 228 aa11.89□□□□□ -0.51
SSB-207ENST00000465871 TPCN2Q8NHX9 752 aa11.89□□□□□ -0.51
SSB-207ENST00000465871 ZDHHC3Q9NYG2 299 aa11.89□□□□□ -0.51
SSB-207ENST00000465871 CABP1Q9NZU7 370 aa11.89□□□□□ -0.51
SSB-207ENST00000465871 ATXN7L1Q9ULK2 861 aaPredicted RBP11.89□□□□□ -0.51
SSB-207ENST00000465871 EPHA4P54764 986 aa11.88□□□□□ -0.51
SSB-207ENST00000465871 ZBTB7BO15156 539 aaPredicted RBP11.87□□□□□ -0.51
SSB-207ENST00000465871 MAP2K3P46734 347 aa11.87□□□□□ -0.51
SSB-207ENST00000465871 FOXK2Q01167 660 aa11.87□□□□□ -0.51
SSB-207ENST00000465871 KCNMA1Q12791 1236 aa11.87□□□□□ -0.51
SSB-207ENST00000465871 FIGNL1Q6PIW4 674 aa11.87□□□□□ -0.51
SSB-207ENST00000465871 OGFOD1Q8N543 542 aa11.87□□□□□ -0.51
SSB-207ENST00000465871 ACDQ96AP0 544 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms