RNA–Protein interactions for RNA: ENST00000465030.1

SNX12-203, Transcript of sorting nexin 12, humanhuman

TSL 2

Gene SNX12, Length 946 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-203ENST00000465030 SBF1O95248 1867 aa22.21■■□□□ 1.15
SNX12-203ENST00000465030 KDM6AO15550 1401 aaPredicted RBP22.21■■□□□ 1.15
SNX12-203ENST00000465030 LOC102724428A0A0B4J2F2 783 aa22.2■■□□□ 1.14
SNX12-203ENST00000465030 TNRC18O15417 2968 aaPredicted RBP22.2■■□□□ 1.14
SNX12-203ENST00000465030 SIK1P57059 783 aa22.2■■□□□ 1.14
SNX12-203ENST00000465030 PCDH11XQ9BZA7 1347 aa22.2■■□□□ 1.14
SNX12-203ENST00000465030 PCDH11YQ9BZA8 1340 aa22.2■■□□□ 1.14
SNX12-203ENST00000465030 CCDC85CA6NKD9 419 aa22.19■■□□□ 1.14
SNX12-203ENST00000465030 MAP2P11137 1827 aaKnown RBP22.18■■□□□ 1.14
SNX12-203ENST00000465030 WBP1LQ9NX94 342 aa22.18■■□□□ 1.14
SNX12-203ENST00000465030 HOXC9P31274 260 aa22.17■■□□□ 1.14
SNX12-203ENST00000465030 RASSF7Q02833 373 aa22.17■■□□□ 1.14
SNX12-203ENST00000465030 RAPGEF4Q8WZA2 1011 aa22.17■■□□□ 1.14
SNX12-203ENST00000465030 PIGBQ92521 554 aa22.17■■□□□ 1.14
SNX12-203ENST00000465030 PARP3Q9Y6F1 533 aa22.17■■□□□ 1.14
SNX12-203ENST00000465030 RGPD2P0DJD1 1756 aa22.17■■□□□ 1.14
SNX12-203ENST00000465030 CD163L1Q9NR16 1453 aa22.16■■□□□ 1.14
SNX12-203ENST00000465030 ITPK1Q13572 414 aa22.16■■□□□ 1.14
SNX12-203ENST00000465030 POTECB2RU33 542 aa22.15■■□□□ 1.14
SNX12-203ENST00000465030 HSPA8P11142 646 aaKnown RBP22.15■■□□□ 1.14
SNX12-203ENST00000465030 MAP3K19Q56UN5 1328 aa22.14■■□□□ 1.14
SNX12-203ENST00000465030 TRAPPC3LQ5T215 181 aa22.14■■□□□ 1.13
SNX12-203ENST00000465030 NBPF6Q5VWK0 638 aa22.14■■□□□ 1.13
SNX12-203ENST00000465030 USHBP1Q8N6Y0 703 aa22.14■■□□□ 1.13
SNX12-203ENST00000465030 NBPF4Q96M43 638 aa22.14■■□□□ 1.13
SNX12-203ENST00000465030 PDE4DIPQ5VU43 2346 aa22.14■■□□□ 1.13
SNX12-203ENST00000465030 RAB3GAP2Q9H2M9 1393 aa22.13■■□□□ 1.13
SNX12-203ENST00000465030 GYS1P13807 737 aa22.13■■□□□ 1.13
SNX12-203ENST00000465030 LMNB1P20700 586 aa22.13■■□□□ 1.13
SNX12-203ENST00000465030 VEGFBP49765 207 aa22.13■■□□□ 1.13
SNX12-203ENST00000465030 EDC4Q6P2E9 1401 aaKnown RBP22.13■■□□□ 1.13
SNX12-203ENST00000465030 ITGB4P16144 1822 aa22.13■■□□□ 1.13
SNX12-203ENST00000465030 CYP27B1O15528 508 aa22.12■■□□□ 1.13
SNX12-203ENST00000465030 TATP17735 454 aaPredicted RBP22.12■■□□□ 1.13
SNX12-203ENST00000465030 CHADLQ6NUI6 762 aa22.12■■□□□ 1.13
SNX12-203ENST00000465030 RTCBQ9Y3I0 505 aaKnown RBP22.12■■□□□ 1.13
SNX12-203ENST00000465030 ATP6V1AP38606 617 aa22.11■■□□□ 1.13
SNX12-203ENST00000465030 AMPHP49418 695 aa22.11■■□□□ 1.13
SNX12-203ENST00000465030 CHRNA5P30532 468 aa22.1■■□□□ 1.13
SNX12-203ENST00000465030 ADRA2BP18089 450 aa22.08■■□□□ 1.13
SNX12-203ENST00000465030 ARHGEF1Q92888 912 aaKnown RBP22.08■■□□□ 1.13
SNX12-203ENST00000465030 TIAM2Q8IVF5 1701 aa22.07■■□□□ 1.12
SNX12-203ENST00000465030 HDGFL2Q7Z4V5 671 aaPredicted RBP22.07■■□□□ 1.12
SNX12-203ENST00000465030 ASAP1Q9ULH1 1129 aa22.06■■□□□ 1.12
SNX12-203ENST00000465030 PASKQ96RG2 1323 aa22.06■■□□□ 1.12
SNX12-203ENST00000465030 RTL1A6NKG5 1358 aa22.05■■□□□ 1.12
SNX12-203ENST00000465030 RFC4P35249 363 aa22.05■■□□□ 1.12
SNX12-203ENST00000465030 VIRMAQ69YN4 1812 aaKnown RBP22.05■■□□□ 1.12
SNX12-203ENST00000465030 POTEIP0CG38 1075 aa22.04■■□□□ 1.12
SNX12-203ENST00000465030 POTEJP0CG39 1038 aa22.04■■□□□ 1.12
SNX12-203ENST00000465030 DPY19L2Q6NUT2 758 aa22.04■■□□□ 1.12
SNX12-203ENST00000465030 FBLN1P23142 703 aa22.03■■□□□ 1.12
SNX12-203ENST00000465030 SMG6Q86US8 1419 aaKnown RBP22.03■■□□□ 1.12
SNX12-203ENST00000465030 NKX1-1Q15270 411 aaPredicted RBP22.02■■□□□ 1.12
SNX12-203ENST00000465030 TMC1Q8TDI8 760 aa22.02■■□□□ 1.12
SNX12-203ENST00000465030 TMOD3Q9NYL9 352 aa22.02■■□□□ 1.12
SNX12-203ENST00000465030 TMEM88BA6NKF7 163 aa22.01■■□□□ 1.11
SNX12-203ENST00000465030 MAP2K1Q02750 393 aaPredicted RBP22.01■■□□□ 1.11
SNX12-203ENST00000465030 DDR1Q08345 913 aa22.01■■□□□ 1.11
SNX12-203ENST00000465030 A0A1W2PP64 1363 aa22■■□□□ 1.11
SNX12-203ENST00000465030 KDRP35968 1356 aa22■■□□□ 1.11
SNX12-203ENST00000465030 CFAP44Q96MT7 982 aa22■■□□□ 1.11
SNX12-203ENST00000465030 RC3H1Q5TC82 1133 aaKnown RBP21.99■■□□□ 1.11
SNX12-203ENST00000465030 COG3Q96JB2 828 aa21.99■■□□□ 1.11
SNX12-203ENST00000465030 SLC12A5Q9H2X9 1139 aa21.99■■□□□ 1.11
SNX12-203ENST00000465030 ATG3Q9NT62 314 aa21.98■■□□□ 1.11
SNX12-203ENST00000465030 NFKBIEO00221 500 aa21.97■■□□□ 1.11
SNX12-203ENST00000465030 RPS6KA4O75676 772 aa21.97■■□□□ 1.11
SNX12-203ENST00000465030 TERF2IPQ9NYB0 399 aa21.97■■□□□ 1.11
SNX12-203ENST00000465030 CNTNAP4Q9C0A0 1308 aa21.97■■□□□ 1.11
SNX12-203ENST00000465030 FKBP8Q14318 412 aa21.96■■□□□ 1.11
SNX12-203ENST00000465030 RASSF10A6NK89 507 aa21.95■■□□□ 1.1
SNX12-203ENST00000465030 SLC4A9Q96Q91 983 aa21.95■■□□□ 1.1
SNX12-203ENST00000465030 RRS1Q15050 365 aaKnown RBP21.94■■□□□ 1.1
SNX12-203ENST00000465030 LDHDQ86WU2 507 aa21.94■■□□□ 1.1
SNX12-203ENST00000465030 POLRMTO00411 1230 aaKnown RBP21.93■■□□□ 1.1
SNX12-203ENST00000465030 WDR33Q9C0J8 1336 aaKnown RBP21.93■■□□□ 1.1
SNX12-203ENST00000465030 SRP68Q9UHB9 627 aaKnown RBP21.93■■□□□ 1.1
SNX12-203ENST00000465030 DEFB115Q30KQ5 88 aa21.92■■□□□ 1.1
SNX12-203ENST00000465030 USP42Q9H9J4 1324 aaKnown RBP21.91■■□□□ 1.1
SNX12-203ENST00000465030 ITGBL1O95965 494 aaPredicted RBP21.91■■□□□ 1.1
SNX12-203ENST00000465030 ERFEQ4G0M1 354 aa21.91■■□□□ 1.1
SNX12-203ENST00000465030 CCDC88AQ3V6T2 1871 aa21.91■■□□□ 1.1
SNX12-203ENST00000465030 COL5A3P25940 1745 aaPredicted RBP21.91■■□□□ 1.1
SNX12-203ENST00000465030 ZNF831Q5JPB2 1677 aa21.91■■□□□ 1.1
SNX12-203ENST00000465030 TTLL6Q8N841 843 aa21.9■■□□□ 1.1
SNX12-203ENST00000465030 ROCK2O75116 1388 aaKnown RBP21.89■■□□□ 1.1
SNX12-203ENST00000465030 INSRP06213 1382 aa21.89■■□□□ 1.1
SNX12-203ENST00000465030 DDNO94850 711 aaPredicted RBP21.89■■□□□ 1.09
SNX12-203ENST00000465030 MCOLN1Q9GZU1 580 aa21.89■■□□□ 1.09
SNX12-203ENST00000465030 SPG7Q9UQ90 795 aa21.89■■□□□ 1.09
SNX12-203ENST00000465030 HSP90AB2PQ58FF8 381 aa21.88■■□□□ 1.09
SNX12-203ENST00000465030 RBM42Q9BTD8 480 aaKnown RBP21.88■■□□□ 1.09
SNX12-203ENST00000465030 IQCA1LA6NCM1 817 aa21.87■■□□□ 1.09
SNX12-203ENST00000465030 TM4SF1P30408 202 aa21.87■■□□□ 1.09
SNX12-203ENST00000465030 PRPF38BQ5VTL8 546 aaKnown RBP21.87■■□□□ 1.09
SNX12-203ENST00000465030 BEGAINQ9BUH8 593 aa21.87■■□□□ 1.09
SNX12-203ENST00000465030 THSD7BQ9C0I4 1608 aa21.86■■□□□ 1.09
SNX12-203ENST00000465030 DLEC1Q9Y238 1755 aa21.86■■□□□ 1.09
SNX12-203ENST00000465030 MYH14Q7Z406 1995 aaKnown RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms