RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 TIMMDC1Q9NPL8 285 aa7.7□□□□□ -1.18
TM9SF3-203ENST00000464654 PCDHGA11Q9Y5H2 935 aa7.7□□□□□ -1.18
TM9SF3-203ENST00000464654 TMEM214Q6NUQ4 689 aaKnown RBP7.69□□□□□ -1.18
TM9SF3-203ENST00000464654 RHBDD1Q8TEB9 315 aa7.69□□□□□ -1.18
TM9SF3-203ENST00000464654 SLC4A9Q96Q91 983 aa7.69□□□□□ -1.18
TM9SF3-203ENST00000464654 A0A1B0GTH6 734 aa7.68□□□□□ -1.18
TM9SF3-203ENST00000464654 CDC14CA4D256 554 aa7.68□□□□□ -1.18
TM9SF3-203ENST00000464654 ATP9BO43861 1147 aa7.68□□□□□ -1.18
TM9SF3-203ENST00000464654 F11P03951 625 aa7.68□□□□□ -1.18
TM9SF3-203ENST00000464654 KRT76Q01546 638 aa7.68□□□□□ -1.18
TM9SF3-203ENST00000464654 NCOA4Q13772 614 aa7.68□□□□□ -1.18
TM9SF3-203ENST00000464654 TLR1Q15399 786 aa7.68□□□□□ -1.18
TM9SF3-203ENST00000464654 TRIM50Q86XT4 487 aa7.68□□□□□ -1.18
TM9SF3-203ENST00000464654 ZNF837Q96EG3 531 aaPredicted RBP7.68□□□□□ -1.18
TM9SF3-203ENST00000464654 UCN2Q96RP3 112 aa7.68□□□□□ -1.18
TM9SF3-203ENST00000464654 COL25A1Q9BXS0 654 aaPredicted RBP7.68□□□□□ -1.18
TM9SF3-203ENST00000464654 CUEDC1Q9NWM3 386 aaPredicted RBP7.68□□□□□ -1.18
TM9SF3-203ENST00000464654 TMEM229AB2RXF0 380 aa7.67□□□□□ -1.18
TM9SF3-203ENST00000464654 SMTNP53814 917 aa7.67□□□□□ -1.18
TM9SF3-203ENST00000464654 GTF2IP78347 998 aa7.67□□□□□ -1.18
TM9SF3-203ENST00000464654 FOXR1Q6PIV2 292 aa7.67□□□□□ -1.18
TM9SF3-203ENST00000464654 BACH1O14867 736 aa7.66□□□□□ -1.18
TM9SF3-203ENST00000464654 STAU1O95793 577 aaKnown RBP7.66□□□□□ -1.18
TM9SF3-203ENST00000464654 LBRQ14739 615 aaKnown RBP7.66□□□□□ -1.18
TM9SF3-203ENST00000464654 MTFR1Q15390 333 aa7.66□□□□□ -1.18
TM9SF3-203ENST00000464654 DBN1Q16643 649 aa7.66□□□□□ -1.18
TM9SF3-203ENST00000464654 C4orf17Q53FE4 359 aa7.66□□□□□ -1.18
TM9SF3-203ENST00000464654 GLMNQ92990 594 aa7.66□□□□□ -1.18
TM9SF3-203ENST00000464654 USP17L3A6NCW0 530 aa7.65□□□□□ -1.18
TM9SF3-203ENST00000464654 USP17L4A6NCW7 530 aa7.65□□□□□ -1.18
TM9SF3-203ENST00000464654 CDK2AP1O14519 115 aa7.65□□□□□ -1.18
TM9SF3-203ENST00000464654 SLURP2P0DP57 97 aa7.65□□□□□ -1.18
TM9SF3-203ENST00000464654 ATP1A2P50993 1020 aa7.65□□□□□ -1.18
TM9SF3-203ENST00000464654 RNFT1Q5M7Z0 435 aa7.65□□□□□ -1.18
TM9SF3-203ENST00000464654 USP17L2Q6R6M4 530 aa7.65□□□□□ -1.18
TM9SF3-203ENST00000464654 RIPOR1Q6ZS17 1223 aa7.65□□□□□ -1.18
TM9SF3-203ENST00000464654 TBC1D9Q6ZT07 1266 aa7.65□□□□□ -1.18
TM9SF3-203ENST00000464654 USP17L1Q7RTZ2 530 aa7.65□□□□□ -1.18
TM9SF3-203ENST00000464654 C1orf216Q8TAB5 229 aa7.65□□□□□ -1.18
TM9SF3-203ENST00000464654 CNTNAP3BQ96NU0 1288 aa7.65□□□□□ -1.18
TM9SF3-203ENST00000464654 GAS2L1Q99501 681 aaPredicted RBP7.65□□□□□ -1.18
TM9SF3-203ENST00000464654 CNTNAP3Q9BZ76 1288 aa7.65□□□□□ -1.18
TM9SF3-203ENST00000464654 A6NJY4 79 aa7.64□□□□□ -1.19
TM9SF3-203ENST00000464654 NIFKQ9BYG3 293 aaKnown RBP7.64□□□□□ -1.19
TM9SF3-203ENST00000464654 SRSF11Q05519 484 aaKnown RBP7.63□□□□□ -1.19
TM9SF3-203ENST00000464654 ZNF295-AS1Q8N0V1 137 aa7.63□□□□□ -1.19
TM9SF3-203ENST00000464654 DEPDC4Q8N2C3 294 aa7.63□□□□□ -1.19
TM9SF3-203ENST00000464654 NUCKS1Q9H1E3 243 aaKnown RBP7.63□□□□□ -1.19
TM9SF3-203ENST00000464654 IQSEC3Q9UPP2 1182 aaPredicted RBP7.63□□□□□ -1.19
TM9SF3-203ENST00000464654 PHKA2P46019 1235 aa7.62□□□□□ -1.19
TM9SF3-203ENST00000464654 PSME1Q06323 249 aa7.62□□□□□ -1.19
TM9SF3-203ENST00000464654 GAS6Q14393 721 aa7.62□□□□□ -1.19
TM9SF3-203ENST00000464654 LARGE2Q8N3Y3 721 aa7.62□□□□□ -1.19
TM9SF3-203ENST00000464654 CALR3Q96L12 384 aaKnown RBP7.62□□□□□ -1.19
TM9SF3-203ENST00000464654 TRERF1Q96PN7 1200 aa7.62□□□□□ -1.19
TM9SF3-203ENST00000464654 CRISPLD1Q9H336 500 aa7.62□□□□□ -1.19
TM9SF3-203ENST00000464654 PALM3A6NDB9 673 aaPredicted RBP7.61□□□□□ -1.19
TM9SF3-203ENST00000464654 M0R2N6 131 aa7.61□□□□□ -1.19
TM9SF3-203ENST00000464654 CSB-PGBD3P0DP91 1061 aa7.61□□□□□ -1.19
TM9SF3-203ENST00000464654 MSX1P28360 303 aa7.61□□□□□ -1.19
TM9SF3-203ENST00000464654 PGBD3Q8N328 593 aa7.61□□□□□ -1.19
TM9SF3-203ENST00000464654 KCTD17Q8N5Z5 321 aa7.61□□□□□ -1.19
TM9SF3-203ENST00000464654 CFHR5Q9BXR6 569 aa7.61□□□□□ -1.19
TM9SF3-203ENST00000464654 MBIPQ9NS73 344 aa7.61□□□□□ -1.19
TM9SF3-203ENST00000464654 ZNF358Q9NW07 568 aa7.61□□□□□ -1.19
TM9SF3-203ENST00000464654 SCHIP1Q9P0W5 487 aaPredicted RBP7.61□□□□□ -1.19
TM9SF3-203ENST00000464654 SERTAD1Q9UHV2 236 aa7.61□□□□□ -1.19
TM9SF3-203ENST00000464654 MAFBQ9Y5Q3 323 aaPredicted RBP7.61□□□□□ -1.19
TM9SF3-203ENST00000464654 ZBTB7BO15156 539 aaPredicted RBP7.6□□□□□ -1.19
TM9SF3-203ENST00000464654 EPHA4P54764 986 aa7.6□□□□□ -1.19
TM9SF3-203ENST00000464654 FOXK2Q01167 660 aa7.6□□□□□ -1.19
TM9SF3-203ENST00000464654 SIX5Q8N196 739 aa7.6□□□□□ -1.19
TM9SF3-203ENST00000464654 GTPBP3Q969Y2 492 aaKnown RBP7.6□□□□□ -1.19
TM9SF3-203ENST00000464654 TFIP11Q9UBB9 837 aaKnown RBP7.6□□□□□ -1.19
TM9SF3-203ENST00000464654 MKRN1Q9UHC7 482 aaKnown RBP7.6□□□□□ -1.19
TM9SF3-203ENST00000464654 PLA2G4AP47712 749 aa7.59□□□□□ -1.19
TM9SF3-203ENST00000464654 CLDN10P78369 228 aa7.59□□□□□ -1.19
TM9SF3-203ENST00000464654 NBPF1Q3BBV0 1214 aa7.59□□□□□ -1.19
TM9SF3-203ENST00000464654 EFHC2Q5JST6 749 aa7.59□□□□□ -1.19
TM9SF3-203ENST00000464654 CCDC102BQ68D86 513 aa7.59□□□□□ -1.19
TM9SF3-203ENST00000464654 OGFOD1Q8N543 542 aa7.59□□□□□ -1.19
TM9SF3-203ENST00000464654 PPP1R12CQ9BZL4 782 aa7.59□□□□□ -1.19
TM9SF3-203ENST00000464654 GPAMQ9HCL2 828 aa7.59□□□□□ -1.19
TM9SF3-203ENST00000464654 DNAAF2Q9NVR5 837 aaKnown RBP7.59□□□□□ -1.19
TM9SF3-203ENST00000464654 ZDHHC3Q9NYG2 299 aa7.59□□□□□ -1.19
TM9SF3-203ENST00000464654 PHF24Q9UPV7 400 aa7.59□□□□□ -1.19
TM9SF3-203ENST00000464654 ADAMTS2O95450 1211 aa7.58□□□□□ -1.2
TM9SF3-203ENST00000464654 THBS1P07996 1170 aa7.58□□□□□ -1.2
TM9SF3-203ENST00000464654 UBAP2LQ14157 1087 aaKnown RBP7.58□□□□□ -1.2
TM9SF3-203ENST00000464654 NLRP8Q86W28 1048 aa7.58□□□□□ -1.2
TM9SF3-203ENST00000464654 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.58□□□□□ -1.2
TM9SF3-203ENST00000464654 TPCN2Q8NHX9 752 aa7.58□□□□□ -1.2
TM9SF3-203ENST00000464654 ATP4AP20648 1035 aa7.57□□□□□ -1.2
TM9SF3-203ENST00000464654 TEAD4Q15561 434 aa7.57□□□□□ -1.2
TM9SF3-203ENST00000464654 FIGNL1Q6PIW4 674 aa7.57□□□□□ -1.2
TM9SF3-203ENST00000464654 RUBCNLQ9H714 662 aa7.57□□□□□ -1.2
TM9SF3-203ENST00000464654 LRRC4BQ9NT99 713 aa7.57□□□□□ -1.2
TM9SF3-203ENST00000464654 NSFL1CQ9UNZ2 370 aaKnown RBP7.57□□□□□ -1.2
TM9SF3-203ENST00000464654 KIAA1024Q9UPX6 916 aa7.57□□□□□ -1.2
TM9SF3-203ENST00000464654 GPR25O00155 361 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms