RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 ALDH1L2Q3SY69 923 aa19.86■□□□□ 0.77
GYPC-205ENST00000464053 ZNF428Q96B54 188 aa19.86■□□□□ 0.77
GYPC-205ENST00000464053 SLC52A2Q9HAB3 445 aa19.86■□□□□ 0.77
GYPC-205ENST00000464053 CCDC9Q9Y3X0 531 aaKnown RBP19.86■□□□□ 0.77
GYPC-205ENST00000464053 NFATC2IPQ8NCF5 419 aa19.85■□□□□ 0.77
GYPC-205ENST00000464053 EXOC6Q8TAG9 804 aa19.85■□□□□ 0.77
GYPC-205ENST00000464053 TNNQ9UQP3 1299 aa19.85■□□□□ 0.77
GYPC-205ENST00000464053 NKX1-1Q15270 411 aaPredicted RBP19.84■□□□□ 0.77
GYPC-205ENST00000464053 MEX3CQ5U5Q3 659 aaKnown RBP19.84■□□□□ 0.77
GYPC-205ENST00000464053 ERICH6BQ5W0A0 696 aa19.84■□□□□ 0.77
GYPC-205ENST00000464053 THRAP3Q9Y2W1 955 aaKnown RBP19.84■□□□□ 0.77
GYPC-205ENST00000464053 MRC1P22897 1456 aa19.84■□□□□ 0.77
GYPC-205ENST00000464053 CANXP27824 592 aaKnown RBP19.83■□□□□ 0.77
GYPC-205ENST00000464053 CRBNQ96SW2 442 aa19.83■□□□□ 0.77
GYPC-205ENST00000464053 EIF4A1P60842 406 aaKnown RBP19.83■□□□□ 0.76
GYPC-205ENST00000464053 MRPL50Q8N5N7 158 aaKnown RBP19.83■□□□□ 0.76
GYPC-205ENST00000464053 USP21Q9UK80 565 aa19.83■□□□□ 0.76
GYPC-205ENST00000464053 VPS72Q15906 364 aa19.82■□□□□ 0.76
GYPC-205ENST00000464053 NOB1Q9ULX3 412 aaKnown RBP19.82■□□□□ 0.76
GYPC-205ENST00000464053 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.81■□□□□ 0.76
GYPC-205ENST00000464053 TOGARAM1Q9Y4F4 1720 aa19.81■□□□□ 0.76
GYPC-205ENST00000464053 EXOC5O00471 708 aa19.81■□□□□ 0.76
GYPC-205ENST00000464053 BRPF1P55201 1214 aaPredicted RBP19.81■□□□□ 0.76
GYPC-205ENST00000464053 SLC39A6Q13433 755 aa19.81■□□□□ 0.76
GYPC-205ENST00000464053 PANK1Q8TE04 598 aa19.81■□□□□ 0.76
GYPC-205ENST00000464053 CABP4P57796 275 aa19.8■□□□□ 0.76
GYPC-205ENST00000464053 ZKSCAN2Q63HK3 967 aa19.8■□□□□ 0.76
GYPC-205ENST00000464053 BARGINQ6ZT62 677 aa19.8■□□□□ 0.76
GYPC-205ENST00000464053 CDCA7Q9BWT1 371 aaPredicted RBP19.8■□□□□ 0.76
GYPC-205ENST00000464053 TNS2Q63HR2 1409 aa19.8■□□□□ 0.76
GYPC-205ENST00000464053 PDE3AQ14432 1141 aa19.79■□□□□ 0.76
GYPC-205ENST00000464053 RLBP1P12271 317 aa19.79■□□□□ 0.76
GYPC-205ENST00000464053 AFF2P51816 1311 aa19.78■□□□□ 0.76
GYPC-205ENST00000464053 ERVV-2B6SEH9 535 aa19.78■□□□□ 0.76
GYPC-205ENST00000464053 ZNF790Q6PG37 636 aa19.78■□□□□ 0.76
GYPC-205ENST00000464053 CLUAP1Q96AJ1 413 aa19.78■□□□□ 0.76
GYPC-205ENST00000464053 PPP4R2Q9NY27 417 aa19.78■□□□□ 0.76
GYPC-205ENST00000464053 KIF16BQ96L93 1317 aa19.78■□□□□ 0.76
GYPC-205ENST00000464053 TRIM27P14373 513 aa19.77■□□□□ 0.76
GYPC-205ENST00000464053 DDB1Q16531 1140 aa19.77■□□□□ 0.76
GYPC-205ENST00000464053 FAM98CQ17RN3 349 aaKnown RBP19.77■□□□□ 0.76
GYPC-205ENST00000464053 NECTIN2Q92692 538 aa19.77■□□□□ 0.76
GYPC-205ENST00000464053 HEG1Q9ULI3 1381 aa19.77■□□□□ 0.75
GYPC-205ENST00000464053 ATF7IPQ6VMQ6 1270 aa19.76■□□□□ 0.75
GYPC-205ENST00000464053 SOS1Q07889 1333 aaPredicted RBP19.75■□□□□ 0.75
GYPC-205ENST00000464053 PRAMEF22A3QJZ6 481 aa19.74■□□□□ 0.75
GYPC-205ENST00000464053 SLC4A2P04920 1241 aa19.74■□□□□ 0.75
GYPC-205ENST00000464053 COG6Q9Y2V7 657 aa19.74■□□□□ 0.75
GYPC-205ENST00000464053 ITGB4P16144 1822 aa19.74■□□□□ 0.75
GYPC-205ENST00000464053 IPO8O15397 1037 aaKnown RBP19.74■□□□□ 0.75
GYPC-205ENST00000464053 GIGYF1O75420 1035 aaPredicted RBP19.74■□□□□ 0.75
GYPC-205ENST00000464053 DZIP1LQ8IYY4 767 aaKnown RBP19.74■□□□□ 0.75
GYPC-205ENST00000464053 HDGFL1Q5TGJ6 251 aa19.73■□□□□ 0.75
GYPC-205ENST00000464053 CCDC30Q5VVM6 783 aa19.73■□□□□ 0.75
GYPC-205ENST00000464053 B4GALNT3Q6L9W6 998 aa19.73■□□□□ 0.75
GYPC-205ENST00000464053 MARCH10Q8NA82 808 aaPredicted RBP19.73■□□□□ 0.75
GYPC-205ENST00000464053 GLI3P10071 1580 aa19.73■□□□□ 0.75
GYPC-205ENST00000464053 C5P01031 1676 aa19.72■□□□□ 0.75
GYPC-205ENST00000464053 HOXB7P09629 217 aa19.72■□□□□ 0.75
GYPC-205ENST00000464053 EIF2S2P20042 333 aaKnown RBP19.72■□□□□ 0.75
GYPC-205ENST00000464053 G2E3Q7L622 706 aa19.72■□□□□ 0.75
GYPC-205ENST00000464053 ZNF496Q96IT1 587 aaPredicted RBP19.72■□□□□ 0.75
GYPC-205ENST00000464053 PAPPAQ13219 1627 aa19.72■□□□□ 0.75
GYPC-205ENST00000464053 FTSJ3Q8IY81 847 aaKnown RBP19.72■□□□□ 0.75
GYPC-205ENST00000464053 TTC5Q8N0Z6 440 aa19.72■□□□□ 0.75
GYPC-205ENST00000464053 ARHGAP45Q92619 1136 aa19.72■□□□□ 0.75
GYPC-205ENST00000464053 ATRNO75882 1429 aa19.71■□□□□ 0.75
GYPC-205ENST00000464053 GJD4Q96KN9 370 aaPredicted RBP19.71■□□□□ 0.75
GYPC-205ENST00000464053 KAT6BQ8WYB5 2073 aa19.71■□□□□ 0.75
GYPC-205ENST00000464053 DOT1LQ8TEK3 1739 aa19.71■□□□□ 0.74
GYPC-205ENST00000464053 UBR2Q8IWV8 1755 aa19.7■□□□□ 0.74
GYPC-205ENST00000464053 PIGBQ92521 554 aa19.7■□□□□ 0.74
GYPC-205ENST00000464053 STK31Q9BXU1 1019 aa19.7■□□□□ 0.74
GYPC-205ENST00000464053 TMOD3Q9NYL9 352 aa19.7■□□□□ 0.74
GYPC-205ENST00000464053 CACNA1FO60840 1977 aa19.7■□□□□ 0.74
GYPC-205ENST00000464053 THSD7AQ9UPZ6 1657 aa19.69■□□□□ 0.74
GYPC-205ENST00000464053 MS4A1P11836 297 aa19.69■□□□□ 0.74
GYPC-205ENST00000464053 TMEM57Q8N5G2 664 aa19.69■□□□□ 0.74
GYPC-205ENST00000464053 RGS12O14924 1447 aa19.68■□□□□ 0.74
GYPC-205ENST00000464053 MVPQ14764 893 aaKnown RBP19.68■□□□□ 0.74
GYPC-205ENST00000464053 FMNL2Q96PY5 1086 aa19.68■□□□□ 0.74
GYPC-205ENST00000464053 TRPC5Q9UL62 973 aaPredicted RBP19.68■□□□□ 0.74
GYPC-205ENST00000464053 KCPQ6ZWJ8 1503 aa19.68■□□□□ 0.74
GYPC-205ENST00000464053 A0A0G2JS52 829 aa19.67■□□□□ 0.74
GYPC-205ENST00000464053 MYT1Q01538 1121 aa19.67■□□□□ 0.74
GYPC-205ENST00000464053 CHPF2Q9P2E5 772 aa19.67■□□□□ 0.74
GYPC-205ENST00000464053 API5Q9BZZ5 524 aaKnown RBP19.67■□□□□ 0.74
GYPC-205ENST00000464053 BCL9O00512 1426 aa19.67■□□□□ 0.74
GYPC-205ENST00000464053 ABCC4O15439 1325 aa19.66■□□□□ 0.74
GYPC-205ENST00000464053 PRIM1P49642 420 aaKnown RBP19.66■□□□□ 0.74
GYPC-205ENST00000464053 SYTL4Q96C24 671 aaPredicted RBP19.66■□□□□ 0.74
GYPC-205ENST00000464053 CCDC136Q96JN2 1154 aa19.66■□□□□ 0.74
GYPC-205ENST00000464053 QTRT2Q9H974 415 aaKnown RBP19.66■□□□□ 0.74
GYPC-205ENST00000464053 ASAP1Q9ULH1 1129 aa19.66■□□□□ 0.74
GYPC-205ENST00000464053 PTPRCP08575 1304 aa19.66■□□□□ 0.74
GYPC-205ENST00000464053 ANXA1P04083 346 aa19.65■□□□□ 0.74
GYPC-205ENST00000464053 SNRPA1P09661 255 aaKnown RBP19.65■□□□□ 0.74
GYPC-205ENST00000464053 ITPRIPQ8IWB1 547 aa19.65■□□□□ 0.74
GYPC-205ENST00000464053 ACSBG1Q96GR2 724 aa19.65■□□□□ 0.74
GYPC-205ENST00000464053 PHAXQ9H814 394 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms