RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 IGSF1Q8N6C5 1336 aa21.04■□□□□ 0.96
CMSS1-202ENST00000463526 CLSPNQ9HAW4 1339 aa21.04■□□□□ 0.96
CMSS1-202ENST00000463526 ANKRD26Q9UPS8 1709 aa21.03■□□□□ 0.96
CMSS1-202ENST00000463526 PLEKHO1Q53GL0 409 aaPredicted RBP21.02■□□□□ 0.96
CMSS1-202ENST00000463526 ZNF526Q8TF50 670 aaPredicted RBP21.02■□□□□ 0.96
CMSS1-202ENST00000463526 ATP10DQ9P241 1426 aa21.02■□□□□ 0.96
CMSS1-202ENST00000463526 ZNF530Q6P9A1 599 aaPredicted RBP21.01■□□□□ 0.95
CMSS1-202ENST00000463526 UBR3Q6ZT12 1888 aa21.01■□□□□ 0.95
CMSS1-202ENST00000463526 ERVV-2B6SEH9 535 aa21■□□□□ 0.95
CMSS1-202ENST00000463526 MMP10P09238 476 aa21■□□□□ 0.95
CMSS1-202ENST00000463526 TRAPPC3LQ5T215 181 aa21■□□□□ 0.95
CMSS1-202ENST00000463526 MORC1Q86VD1 984 aa21■□□□□ 0.95
CMSS1-202ENST00000463526 SLC4A9Q96Q91 983 aa21■□□□□ 0.95
CMSS1-202ENST00000463526 HSP90AB1P08238 724 aaKnown RBP20.99■□□□□ 0.95
CMSS1-202ENST00000463526 CABP4P57796 275 aa20.99■□□□□ 0.95
CMSS1-202ENST00000463526 AEBP1Q8IUX7 1158 aa20.99■□□□□ 0.95
CMSS1-202ENST00000463526 DCAF5Q96JK2 942 aa20.99■□□□□ 0.95
CMSS1-202ENST00000463526 GPBP1L1Q9HC44 474 aaPredicted RBP20.99■□□□□ 0.95
CMSS1-202ENST00000463526 RTCBQ9Y3I0 505 aaKnown RBP20.99■□□□□ 0.95
CMSS1-202ENST00000463526 MTHFSP49914 203 aa20.96■□□□□ 0.95
CMSS1-202ENST00000463526 AMOTQ4VCS5 1084 aa20.96■□□□□ 0.95
CMSS1-202ENST00000463526 ARHGEF1Q92888 912 aaKnown RBP20.96■□□□□ 0.95
CMSS1-202ENST00000463526 PTCD1O75127 700 aaKnown RBP20.95■□□□□ 0.94
CMSS1-202ENST00000463526 C1orf141Q5JVX7 400 aa20.95■□□□□ 0.94
CMSS1-202ENST00000463526 CCER1Q8TC90 406 aaPredicted RBP20.95■□□□□ 0.94
CMSS1-202ENST00000463526 KDRP35968 1356 aa20.95■□□□□ 0.94
CMSS1-202ENST00000463526 SULT6B1Q6IMI4 303 aa20.94■□□□□ 0.94
CMSS1-202ENST00000463526 KNSTRNQ9Y448 316 aa20.94■□□□□ 0.94
CMSS1-202ENST00000463526 RFC4P35249 363 aa20.93■□□□□ 0.94
CMSS1-202ENST00000463526 RC3H1Q5TC82 1133 aaKnown RBP20.93■□□□□ 0.94
CMSS1-202ENST00000463526 NLGN1Q8N2Q7 840 aa20.93■□□□□ 0.94
CMSS1-202ENST00000463526 KDM6AO15550 1401 aaPredicted RBP20.93■□□□□ 0.94
CMSS1-202ENST00000463526 A0A0G2JLW4 131 aa20.92■□□□□ 0.94
CMSS1-202ENST00000463526 RPS6KA4O75676 772 aa20.92■□□□□ 0.94
CMSS1-202ENST00000463526 NFATC2IPQ8NCF5 419 aa20.92■□□□□ 0.94
CMSS1-202ENST00000463526 PLEKHG2Q9H7P9 1386 aa20.91■□□□□ 0.94
CMSS1-202ENST00000463526 BCS1LQ9Y276 419 aa20.91■□□□□ 0.94
CMSS1-202ENST00000463526 ADCY9O60503 1353 aa20.9■□□□□ 0.94
CMSS1-202ENST00000463526 CNTNAP4Q9C0A0 1308 aa20.9■□□□□ 0.94
CMSS1-202ENST00000463526 GYS1P13807 737 aa20.9■□□□□ 0.94
CMSS1-202ENST00000463526 ADRA2BP18089 450 aa20.9■□□□□ 0.94
CMSS1-202ENST00000463526 CCDC87Q9NVE4 849 aa20.89■□□□□ 0.93
CMSS1-202ENST00000463526 PARP3Q9Y6F1 533 aa20.89■□□□□ 0.93
CMSS1-202ENST00000463526 IL13P35225 146 aa20.88■□□□□ 0.93
CMSS1-202ENST00000463526 TGFB2P61812 414 aa20.88■□□□□ 0.93
CMSS1-202ENST00000463526 PXDNLA1KZ92 1463 aa20.88■□□□□ 0.93
CMSS1-202ENST00000463526 CICQ96RK0 1608 aaPredicted RBP20.87■□□□□ 0.93
CMSS1-202ENST00000463526 DPEP1P16444 411 aa20.87■□□□□ 0.93
CMSS1-202ENST00000463526 CRKLP46109 303 aaKnown RBP20.87■□□□□ 0.93
CMSS1-202ENST00000463526 SRP68Q9UHB9 627 aaKnown RBP20.87■□□□□ 0.93
CMSS1-202ENST00000463526 ARHGAP27Q6ZUM4 889 aa20.86■□□□□ 0.93
CMSS1-202ENST00000463526 FCHSD2O94868 740 aa20.85■□□□□ 0.93
CMSS1-202ENST00000463526 HMOX1P09601 288 aa20.83■□□□□ 0.93
CMSS1-202ENST00000463526 FKBP8Q14318 412 aa20.83■□□□□ 0.93
CMSS1-202ENST00000463526 AMER1Q5JTC6 1135 aaPredicted RBP20.83■□□□□ 0.93
CMSS1-202ENST00000463526 LGR6Q9HBX8 967 aa20.83■□□□□ 0.93
CMSS1-202ENST00000463526 C10orf71Q711Q0 1435 aa20.83■□□□□ 0.93
CMSS1-202ENST00000463526 AKAP4Q5JQC9 854 aa20.82■□□□□ 0.92
CMSS1-202ENST00000463526 KIF3CO14782 793 aa20.81■□□□□ 0.92
CMSS1-202ENST00000463526 HSPA6P17066 643 aa20.81■□□□□ 0.92
CMSS1-202ENST00000463526 SLC39A6Q13433 755 aa20.81■□□□□ 0.92
CMSS1-202ENST00000463526 CNGB1Q14028 1251 aaPredicted RBP20.81■□□□□ 0.92
CMSS1-202ENST00000463526 DNAJC10Q8IXB1 793 aa20.81■□□□□ 0.92
CMSS1-202ENST00000463526 N4BP2Q86UW6 1770 aaPredicted RBP20.81■□□□□ 0.92
CMSS1-202ENST00000463526 MYH14Q7Z406 1995 aaKnown RBP20.81■□□□□ 0.92
CMSS1-202ENST00000463526 CC2D1BQ5T0F9 858 aaKnown RBP20.8■□□□□ 0.92
CMSS1-202ENST00000463526 INTS5Q6P9B9 1019 aaKnown RBP20.8■□□□□ 0.92
CMSS1-202ENST00000463526 SLC52A2Q9HAB3 445 aa20.8■□□□□ 0.92
CMSS1-202ENST00000463526 KIF7Q2M1P5 1343 aa20.79■□□□□ 0.92
CMSS1-202ENST00000463526 USP42Q9H9J4 1324 aaKnown RBP20.79■□□□□ 0.92
CMSS1-202ENST00000463526 COL5A3P25940 1745 aaPredicted RBP20.79■□□□□ 0.92
CMSS1-202ENST00000463526 RNMTO43148 476 aaKnown RBP20.79■□□□□ 0.92
CMSS1-202ENST00000463526 DDR1Q08345 913 aa20.79■□□□□ 0.92
CMSS1-202ENST00000463526 ZNF831Q5JPB2 1677 aa20.79■□□□□ 0.92
CMSS1-202ENST00000463526 C4AP0C0L4 1744 aa20.78■□□□□ 0.92
CMSS1-202ENST00000463526 CEP350Q5VT06 3117 aa20.78■□□□□ 0.92
CMSS1-202ENST00000463526 KCNA3P22001 575 aa20.78■□□□□ 0.92
CMSS1-202ENST00000463526 ZPR1O75312 459 aa20.77■□□□□ 0.92
CMSS1-202ENST00000463526 USPL1Q5W0Q7 1092 aa20.77■□□□□ 0.92
CMSS1-202ENST00000463526 PIM2Q9P1W9 311 aa20.77■□□□□ 0.92
CMSS1-202ENST00000463526 CHRNA5P30532 468 aa20.76■□□□□ 0.91
CMSS1-202ENST00000463526 MTHFSDQ2M296 383 aaKnown RBP20.76■□□□□ 0.91
CMSS1-202ENST00000463526 KIF13BQ9NQT8 1826 aa20.76■□□□□ 0.91
CMSS1-202ENST00000463526 KIAA1551Q9HCM1 1747 aa20.75■□□□□ 0.91
CMSS1-202ENST00000463526 DIAPH1O60610 1272 aaKnown RBP20.75■□□□□ 0.91
CMSS1-202ENST00000463526 DALRD3Q5D0E6 543 aaKnown RBP20.75■□□□□ 0.91
CMSS1-202ENST00000463526 C9orf131Q5VYM1 1079 aa20.75■□□□□ 0.91
CMSS1-202ENST00000463526 POLRMTO00411 1230 aaKnown RBP20.74■□□□□ 0.91
CMSS1-202ENST00000463526 NMRK2Q9NPI5 230 aa20.74■□□□□ 0.91
CMSS1-202ENST00000463526 CYP19A1P11511 503 aaPredicted RBP20.73■□□□□ 0.91
CMSS1-202ENST00000463526 TM4SF1P30408 202 aa20.73■□□□□ 0.91
CMSS1-202ENST00000463526 SOS1Q07889 1333 aaPredicted RBP20.73■□□□□ 0.91
CMSS1-202ENST00000463526 ZBTB1Q9Y2K1 713 aa20.72■□□□□ 0.91
CMSS1-202ENST00000463526 TJP1Q07157 1748 aa20.72■□□□□ 0.91
CMSS1-202ENST00000463526 PER1O15534 1290 aaPredicted RBP20.71■□□□□ 0.91
CMSS1-202ENST00000463526 SCN11AQ9UI33 1791 aa20.71■□□□□ 0.91
CMSS1-202ENST00000463526 U2SURPO15042 1029 aaKnown RBP20.7■□□□□ 0.9
CMSS1-202ENST00000463526 TOMM70O94826 608 aa20.7■□□□□ 0.9
CMSS1-202ENST00000463526 CANXP27824 592 aaKnown RBP20.7■□□□□ 0.9
CMSS1-202ENST00000463526 NFIXQ14938 502 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms