RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 WWC3Q9ULE0 1092 aa28.66■■■□□ 2.18
CPSF7-209ENST00000463244 KDRP35968 1356 aa28.64■■■□□ 2.18
CPSF7-209ENST00000463244 ZNF831Q5JPB2 1677 aa28.64■■■□□ 2.17
CPSF7-209ENST00000463244 KIF13BQ9NQT8 1826 aa28.63■■■□□ 2.17
CPSF7-209ENST00000463244 TNNT2P45379 298 aaPredicted RBP28.62■■■□□ 2.17
CPSF7-209ENST00000463244 ZNF526Q8TF50 670 aaPredicted RBP28.61■■■□□ 2.17
CPSF7-209ENST00000463244 CICQ96RK0 1608 aaPredicted RBP28.61■■■□□ 2.17
CPSF7-209ENST00000463244 ERVV-2B6SEH9 535 aa28.6■■■□□ 2.17
CPSF7-209ENST00000463244 MMP10P09238 476 aa28.6■■■□□ 2.17
CPSF7-209ENST00000463244 SLC4A9Q96Q91 983 aa28.6■■■□□ 2.17
CPSF7-209ENST00000463244 POLR3GLQ9BT43 218 aa28.6■■■□□ 2.17
CPSF7-209ENST00000463244 COL5A3P25940 1745 aaPredicted RBP28.6■■■□□ 2.17
CPSF7-209ENST00000463244 KIAA1551Q9HCM1 1747 aa28.6■■■□□ 2.17
CPSF7-209ENST00000463244 RTCBQ9Y3I0 505 aaKnown RBP28.58■■■□□ 2.17
CPSF7-209ENST00000463244 PXDNLA1KZ92 1463 aa28.58■■■□□ 2.17
CPSF7-209ENST00000463244 TRAPPC3LQ5T215 181 aa28.57■■■□□ 2.16
CPSF7-209ENST00000463244 DCAF5Q96JK2 942 aa28.57■■■□□ 2.16
CPSF7-209ENST00000463244 HSP90AB1P08238 724 aaKnown RBP28.56■■■□□ 2.16
CPSF7-209ENST00000463244 N4BP2Q86UW6 1770 aaPredicted RBP28.56■■■□□ 2.16
CPSF7-209ENST00000463244 RC3H1Q5TC82 1133 aaKnown RBP28.55■■■□□ 2.16
CPSF7-209ENST00000463244 RBM42Q9BTD8 480 aaKnown RBP28.55■■■□□ 2.16
CPSF7-209ENST00000463244 KDM6AO15550 1401 aaPredicted RBP28.54■■■□□ 2.16
CPSF7-209ENST00000463244 MYH14Q7Z406 1995 aaKnown RBP28.54■■■□□ 2.16
CPSF7-209ENST00000463244 HSPA6P17066 643 aa28.54■■■□□ 2.16
CPSF7-209ENST00000463244 ADRA2BP18089 450 aa28.54■■■□□ 2.16
CPSF7-209ENST00000463244 NLGN1Q8N2Q7 840 aa28.54■■■□□ 2.16
CPSF7-209ENST00000463244 C10orf71Q711Q0 1435 aa28.53■■■□□ 2.16
CPSF7-209ENST00000463244 CNTNAP4Q9C0A0 1308 aa28.53■■■□□ 2.16
CPSF7-209ENST00000463244 CLSPNQ9HAW4 1339 aa28.53■■■□□ 2.16
CPSF7-209ENST00000463244 TGFB2P61812 414 aa28.53■■■□□ 2.16
CPSF7-209ENST00000463244 PLEKHO1Q53GL0 409 aaPredicted RBP28.53■■■□□ 2.16
CPSF7-209ENST00000463244 ARHGEF1Q92888 912 aaKnown RBP28.52■■■□□ 2.16
CPSF7-209ENST00000463244 C4AP0C0L4 1744 aa28.52■■■□□ 2.16
CPSF7-209ENST00000463244 AMOTQ4VCS5 1084 aa28.5■■■□□ 2.15
CPSF7-209ENST00000463244 ZNF530Q6P9A1 599 aaPredicted RBP28.5■■■□□ 2.15
CPSF7-209ENST00000463244 PANK3Q9H999 370 aa28.5■■■□□ 2.15
CPSF7-209ENST00000463244 KIF3CO14782 793 aa28.49■■■□□ 2.15
CPSF7-209ENST00000463244 RPS6KA4O75676 772 aa28.49■■■□□ 2.15
CPSF7-209ENST00000463244 GYS1P13807 737 aa28.49■■■□□ 2.15
CPSF7-209ENST00000463244 CABP4P57796 275 aa28.49■■■□□ 2.15
CPSF7-209ENST00000463244 BRCA1P38398 1863 aaKnown RBP28.49■■■□□ 2.15
CPSF7-209ENST00000463244 IFFO2Q5TF58 517 aa28.48■■■□□ 2.15
CPSF7-209ENST00000463244 A0A0G2JLW4 131 aa28.47■■■□□ 2.15
CPSF7-209ENST00000463244 RFC4P35249 363 aa28.47■■■□□ 2.15
CPSF7-209ENST00000463244 CCDC87Q9NVE4 849 aa28.47■■■□□ 2.15
CPSF7-209ENST00000463244 BCS1LQ9Y276 419 aa28.47■■■□□ 2.15
CPSF7-209ENST00000463244 AEBP1Q8IUX7 1158 aa28.46■■■□□ 2.15
CPSF7-209ENST00000463244 MTHFSP49914 203 aa28.45■■■□□ 2.14
CPSF7-209ENST00000463244 EIF4G2P78344 907 aaKnown RBP eCLIP28.45■■■□□ 2.14
CPSF7-209ENST00000463244 HSPA5P11021 654 aaKnown RBP28.44■■■□□ 2.14
CPSF7-209ENST00000463244 PARP3Q9Y6F1 533 aa28.44■■■□□ 2.14
CPSF7-209ENST00000463244 DPEP1P16444 411 aa28.43■■■□□ 2.14
CPSF7-209ENST00000463244 C1orf141Q5JVX7 400 aa28.43■■■□□ 2.14
CPSF7-209ENST00000463244 PTCD1O75127 700 aaKnown RBP28.42■■■□□ 2.14
CPSF7-209ENST00000463244 TJP1Q07157 1748 aa28.41■■■□□ 2.14
CPSF7-209ENST00000463244 MORC1Q86VD1 984 aa28.41■■■□□ 2.14
CPSF7-209ENST00000463244 NFATC2IPQ8NCF5 419 aa28.41■■■□□ 2.14
CPSF7-209ENST00000463244 ARFGEF1Q9Y6D6 1849 aa28.41■■■□□ 2.14
CPSF7-209ENST00000463244 SCN11AQ9UI33 1791 aa28.4■■■□□ 2.14
CPSF7-209ENST00000463244 CRKLP46109 303 aaKnown RBP28.4■■■□□ 2.14
CPSF7-209ENST00000463244 FCHSD2O94868 740 aa28.39■■■□□ 2.14
CPSF7-209ENST00000463244 ARHGAP27Q6ZUM4 889 aa28.39■■■□□ 2.14
CPSF7-209ENST00000463244 PCGF6Q9BYE7 350 aa28.39■■■□□ 2.14
CPSF7-209ENST00000463244 KCNA3P22001 575 aa28.38■■■□□ 2.13
CPSF7-209ENST00000463244 SULT6B1Q6IMI4 303 aa28.38■■■□□ 2.13
CPSF7-209ENST00000463244 SRP68Q9UHB9 627 aaKnown RBP28.36■■■□□ 2.13
CPSF7-209ENST00000463244 USP42Q9H9J4 1324 aaKnown RBP28.36■■■□□ 2.13
CPSF7-209ENST00000463244 IL13P35225 146 aa28.35■■■□□ 2.13
CPSF7-209ENST00000463244 FKBP8Q14318 412 aa28.35■■■□□ 2.13
CPSF7-209ENST00000463244 ADAMTS7Q9UKP4 1686 aa28.35■■■□□ 2.13
CPSF7-209ENST00000463244 TOMM70O94826 608 aa28.34■■■□□ 2.13
CPSF7-209ENST00000463244 DDR1Q08345 913 aa28.33■■■□□ 2.13
CPSF7-209ENST00000463244 PIM2Q9P1W9 311 aa28.32■■■□□ 2.12
CPSF7-209ENST00000463244 KNSTRNQ9Y448 316 aa28.32■■■□□ 2.12
CPSF7-209ENST00000463244 APLP1P51693 650 aa28.31■■■□□ 2.12
CPSF7-209ENST00000463244 INTS5Q6P9B9 1019 aaKnown RBP28.31■■■□□ 2.12
CPSF7-209ENST00000463244 NMRK2Q9NPI5 230 aa28.31■■■□□ 2.12
CPSF7-209ENST00000463244 AKAP4Q5JQC9 854 aa28.3■■■□□ 2.12
CPSF7-209ENST00000463244 VIRMAQ69YN4 1812 aaKnown RBP28.29■■■□□ 2.12
CPSF7-209ENST00000463244 DALRD3Q5D0E6 543 aaKnown RBP28.29■■■□□ 2.12
CPSF7-209ENST00000463244 C9orf131Q5VYM1 1079 aa28.29■■■□□ 2.12
CPSF7-209ENST00000463244 SLC52A2Q9HAB3 445 aa28.28■■■□□ 2.12
CPSF7-209ENST00000463244 MRC1P22897 1456 aa28.27■■■□□ 2.12
CPSF7-209ENST00000463244 POLRMTO00411 1230 aaKnown RBP28.27■■■□□ 2.12
CPSF7-209ENST00000463244 TM4SF1P30408 202 aa28.26■■■□□ 2.11
CPSF7-209ENST00000463244 DNAJC10Q8IXB1 793 aa28.26■■■□□ 2.11
CPSF7-209ENST00000463244 CHRNA5P30532 468 aa28.25■■■□□ 2.11
CPSF7-209ENST00000463244 AMER1Q5JTC6 1135 aaPredicted RBP28.25■■■□□ 2.11
CPSF7-209ENST00000463244 LGR6Q9HBX8 967 aa28.25■■■□□ 2.11
CPSF7-209ENST00000463244 SBF1O95248 1867 aa28.25■■■□□ 2.11
CPSF7-209ENST00000463244 SOS1Q07889 1333 aaPredicted RBP28.24■■■□□ 2.11
CPSF7-209ENST00000463244 PCNTO95613 3336 aa28.24■■■□□ 2.11
CPSF7-209ENST00000463244 ZPR1O75312 459 aa28.24■■■□□ 2.11
CPSF7-209ENST00000463244 USPL1Q5W0Q7 1092 aa28.23■■■□□ 2.11
CPSF7-209ENST00000463244 DNAJC5GQ8N7S2 189 aa28.23■■■□□ 2.11
CPSF7-209ENST00000463244 AFDNP55196 1824 aaKnown RBP28.22■■■□□ 2.11
CPSF7-209ENST00000463244 RNMTO43148 476 aaKnown RBP28.22■■■□□ 2.11
CPSF7-209ENST00000463244 RBM46Q8TBY0 533 aaKnown RBP28.22■■■□□ 2.11
CPSF7-209ENST00000463244 KCPQ6ZWJ8 1503 aa28.22■■■□□ 2.11
CPSF7-209ENST00000463244 CYP19A1P11511 503 aaPredicted RBP28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms