RNA–Protein interactions for RNA: ENST00000463058.5

HHLA3-204, Transcript of HERV-H LTR-associating 3, humanhuman

TSL 2

Gene HHLA3, Length 832 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-204ENST00000463058 ZMYND15Q9H091 742 aa9.6□□□□□ -0.87
HHLA3-204ENST00000463058 SOS2Q07890 1332 aaPredicted RBP9.59□□□□□ -0.87
HHLA3-204ENST00000463058 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.59□□□□□ -0.87
HHLA3-204ENST00000463058 TRIM6-TRIM34B2RNG4 842 aa9.59□□□□□ -0.87
HHLA3-204ENST00000463058 NUDT18Q6ZVK8 323 aa9.59□□□□□ -0.87
HHLA3-204ENST00000463058 NGDNQ8NEJ9 315 aaKnown RBP9.59□□□□□ -0.87
HHLA3-204ENST00000463058 CABP1Q9NZU7 370 aa9.59□□□□□ -0.87
HHLA3-204ENST00000463058 SBNO2Q9Y2G9 1366 aa9.59□□□□□ -0.87
HHLA3-204ENST00000463058 PRR36Q9H6K5 1346 aa9.58□□□□□ -0.88
HHLA3-204ENST00000463058 SNPHO15079 494 aa9.58□□□□□ -0.88
HHLA3-204ENST00000463058 FOXO3O43524 673 aa9.58□□□□□ -0.88
HHLA3-204ENST00000463058 KNDC1Q76NI1 1749 aa9.57□□□□□ -0.88
HHLA3-204ENST00000463058 C11orf95C9JLR9 678 aaPredicted RBP9.57□□□□□ -0.88
HHLA3-204ENST00000463058 PSME1Q06323 249 aa9.57□□□□□ -0.88
HHLA3-204ENST00000463058 POTEEQ6S8J3 1075 aa9.57□□□□□ -0.88
HHLA3-204ENST00000463058 TATDN2Q93075 761 aa9.57□□□□□ -0.88
HHLA3-204ENST00000463058 PUS7Q96PZ0 661 aaKnown RBP9.57□□□□□ -0.88
HHLA3-204ENST00000463058 KCNK17Q96T54 332 aa9.57□□□□□ -0.88
HHLA3-204ENST00000463058 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.57□□□□□ -0.88
HHLA3-204ENST00000463058 SLC12A5Q9H2X9 1139 aa9.57□□□□□ -0.88
HHLA3-204ENST00000463058 POLR3EQ9NVU0 708 aa9.57□□□□□ -0.88
HHLA3-204ENST00000463058 USP21Q9UK80 565 aa9.57□□□□□ -0.88
HHLA3-204ENST00000463058 EP400Q96L91 3159 aa9.57□□□□□ -0.88
HHLA3-204ENST00000463058 ATAD2Q6PL18 1390 aa9.57□□□□□ -0.88
HHLA3-204ENST00000463058 SMAPO00193 183 aa9.56□□□□□ -0.88
HHLA3-204ENST00000463058 CD46P15529 392 aa9.56□□□□□ -0.88
HHLA3-204ENST00000463058 XPCQ01831 940 aaPredicted RBP9.56□□□□□ -0.88
HHLA3-204ENST00000463058 TBC1D2Q9BYX2 928 aa9.56□□□□□ -0.88
HHLA3-204ENST00000463058 RSPH6AQ9H0K4 717 aa9.56□□□□□ -0.88
HHLA3-204ENST00000463058 PNMA3Q9UL41 463 aa9.56□□□□□ -0.88
HHLA3-204ENST00000463058 ARHGEF28Q8N1W1 1705 aaKnown RBP9.56□□□□□ -0.88
HHLA3-204ENST00000463058 NBPF26B4DH59 902 aa9.55□□□□□ -0.88
HHLA3-204ENST00000463058 HDGFL2Q7Z4V5 671 aaPredicted RBP9.55□□□□□ -0.88
HHLA3-204ENST00000463058 FNBP4Q8N3X1 1017 aaPredicted RBP9.55□□□□□ -0.88
HHLA3-204ENST00000463058 TERF2IPQ9NYB0 399 aa9.55□□□□□ -0.88
HHLA3-204ENST00000463058 TRPC5Q9UL62 973 aaPredicted RBP9.55□□□□□ -0.88
HHLA3-204ENST00000463058 ANKARQ7Z5J8 1434 aa9.55□□□□□ -0.88
HHLA3-204ENST00000463058 ACEP12821 1306 aa9.55□□□□□ -0.88
HHLA3-204ENST00000463058 DNAJB2P25686 324 aa9.54□□□□□ -0.88
HHLA3-204ENST00000463058 PSEN2P49810 448 aa9.54□□□□□ -0.88
HHLA3-204ENST00000463058 MCM6Q14566 821 aa9.54□□□□□ -0.88
HHLA3-204ENST00000463058 KRT28Q7Z3Y7 464 aa9.54□□□□□ -0.88
HHLA3-204ENST00000463058 ZBED2Q9BTP6 218 aa9.54□□□□□ -0.88
HHLA3-204ENST00000463058 TMEM134Q9H6X4 195 aa9.54□□□□□ -0.88
HHLA3-204ENST00000463058 LIMD1Q9UGP4 676 aa9.54□□□□□ -0.88
HHLA3-204ENST00000463058 PPIP5K1Q6PFW1 1433 aa9.54□□□□□ -0.88
HHLA3-204ENST00000463058 KIF7Q2M1P5 1343 aa9.54□□□□□ -0.88
HHLA3-204ENST00000463058 NPHP3Q7Z494 1330 aa9.54□□□□□ -0.88
HHLA3-204ENST00000463058 TULP4Q9NRJ4 1543 aa9.53□□□□□ -0.88
HHLA3-204ENST00000463058 CLK2P49760 499 aaKnown RBP9.53□□□□□ -0.88
HHLA3-204ENST00000463058 FLIIQ13045 1269 aa9.53□□□□□ -0.88
HHLA3-204ENST00000463058 SPIRE2Q8WWL2 714 aa9.53□□□□□ -0.88
HHLA3-204ENST00000463058 CDC42BPGQ6DT37 1551 aa9.53□□□□□ -0.88
HHLA3-204ENST00000463058 PXDNQ92626 1479 aa9.53□□□□□ -0.88
HHLA3-204ENST00000463058 QRICH2Q9H0J4 1663 aa9.52□□□□□ -0.89
HHLA3-204ENST00000463058 ATRNO75882 1429 aa9.52□□□□□ -0.89
HHLA3-204ENST00000463058 C1orf115Q9H7X2 142 aa9.52□□□□□ -0.89
HHLA3-204ENST00000463058 PANK3Q9H999 370 aa9.52□□□□□ -0.89
HHLA3-204ENST00000463058 WASHC2AQ641Q2 1341 aa9.52□□□□□ -0.89
HHLA3-204ENST00000463058 CCDC7Q96M83 1385 aa9.51□□□□□ -0.89
HHLA3-204ENST00000463058 ADGRB2O60241 1585 aa9.51□□□□□ -0.89
HHLA3-204ENST00000463058 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.51□□□□□ -0.89
HHLA3-204ENST00000463058 ARXQ96QS3 562 aa9.51□□□□□ -0.89
HHLA3-204ENST00000463058 COL22A1Q8NFW1 1626 aaPredicted RBP9.51□□□□□ -0.89
HHLA3-204ENST00000463058 ATP7BP35670 1465 aa9.51□□□□□ -0.89
HHLA3-204ENST00000463058 BCL9LQ86UU0 1499 aa9.51□□□□□ -0.89
HHLA3-204ENST00000463058 DDX11L8A8MPP1 907 aa9.5□□□□□ -0.89
HHLA3-204ENST00000463058 DDX10Q13206 875 aaKnown RBP9.5□□□□□ -0.89
HHLA3-204ENST00000463058 DMRTA1Q5VZB9 504 aa9.5□□□□□ -0.89
HHLA3-204ENST00000463058 PACS2Q86VP3 889 aa9.5□□□□□ -0.89
HHLA3-204ENST00000463058 CDAN1Q8IWY9 1227 aa9.5□□□□□ -0.89
HHLA3-204ENST00000463058 CLUAP1Q96AJ1 413 aa9.5□□□□□ -0.89
HHLA3-204ENST00000463058 KTN1Q86UP2 1357 aaKnown RBP9.5□□□□□ -0.89
HHLA3-204ENST00000463058 NINLQ9Y2I6 1382 aa9.5□□□□□ -0.89
HHLA3-204ENST00000463058 CNGB1Q14028 1251 aaPredicted RBP9.49□□□□□ -0.89
HHLA3-204ENST00000463058 NUTM2GQ5VZR2 741 aa9.49□□□□□ -0.89
HHLA3-204ENST00000463058 ABTB2Q8N961 1025 aa9.49□□□□□ -0.89
HHLA3-204ENST00000463058 GJD4Q96KN9 370 aaPredicted RBP9.49□□□□□ -0.89
HHLA3-204ENST00000463058 KIAA1468Q9P260 1216 aa9.49□□□□□ -0.89
HHLA3-204ENST00000463058 VARS2Q5ST30 1063 aaKnown RBP9.48□□□□□ -0.89
HHLA3-204ENST00000463058 KNSTRNQ9Y448 316 aa9.48□□□□□ -0.89
HHLA3-204ENST00000463058 SPATA31A3Q5VYP0 1347 aa9.48□□□□□ -0.89
HHLA3-204ENST00000463058 TTC21BQ7Z4L5 1316 aa9.48□□□□□ -0.89
HHLA3-204ENST00000463058 POLR3AO14802 1390 aaPredicted RBP9.48□□□□□ -0.89
HHLA3-204ENST00000463058 FMN2Q9NZ56 1722 aa9.48□□□□□ -0.89
HHLA3-204ENST00000463058 MOXD2PA6NHM9 499 aa9.47□□□□□ -0.89
HHLA3-204ENST00000463058 ST18O60284 1047 aa9.47□□□□□ -0.89
HHLA3-204ENST00000463058 RSBN1LQ6PCB5 846 aaPredicted RBP9.47□□□□□ -0.89
HHLA3-204ENST00000463058 RIC3Q7Z5B4 369 aa9.47□□□□□ -0.89
HHLA3-204ENST00000463058 UNC5CLQ8IV45 518 aa9.47□□□□□ -0.89
HHLA3-204ENST00000463058 AXIN2Q9Y2T1 843 aa9.47□□□□□ -0.89
HHLA3-204ENST00000463058 A0A1W2PP64 1363 aa9.47□□□□□ -0.89
HHLA3-204ENST00000463058 ANKRD36BQ8N2N9 1353 aa9.47□□□□□ -0.89
HHLA3-204ENST00000463058 SPTLC1O15269 473 aa9.46□□□□□ -0.9
HHLA3-204ENST00000463058 RFC5P40937 340 aa9.46□□□□□ -0.9
HHLA3-204ENST00000463058 NME9Q86XW9 330 aa9.46□□□□□ -0.9
HHLA3-204ENST00000463058 SULF1Q8IWU6 871 aa9.46□□□□□ -0.9
HHLA3-204ENST00000463058 CABLES1Q8TDN4 633 aa9.46□□□□□ -0.9
HHLA3-204ENST00000463058 CARD14Q9BXL6 1004 aa9.46□□□□□ -0.9
HHLA3-204ENST00000463058 SLC10A3P09131 477 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 197.9 ms