RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 WWC1Q8IX03 1113 aa10.72□□□□□ -0.69
RPA3-205ENST00000462723 EYA1Q99502 592 aa10.72□□□□□ -0.69
RPA3-205ENST00000462723 KDRP35968 1356 aa10.72□□□□□ -0.69
RPA3-205ENST00000462723 RIPK4P57078 832 aa10.71□□□□□ -0.69
RPA3-205ENST00000462723 PIP4K2BP78356 416 aa10.71□□□□□ -0.69
RPA3-205ENST00000462723 NFE2L2Q16236 605 aa10.71□□□□□ -0.69
RPA3-205ENST00000462723 AEBP1Q8IUX7 1158 aa10.71□□□□□ -0.69
RPA3-205ENST00000462723 WDR63Q8IWG1 891 aa10.71□□□□□ -0.69
RPA3-205ENST00000462723 CERKQ8TCT0 537 aa10.71□□□□□ -0.69
RPA3-205ENST00000462723 KIAA0232Q92628 1395 aa10.71□□□□□ -0.69
RPA3-205ENST00000462723 RGPD5Q99666 1765 aa10.71□□□□□ -0.69
RPA3-205ENST00000462723 COL18A1P39060 1754 aa10.7□□□□□ -0.7
RPA3-205ENST00000462723 COL22A1Q8NFW1 1626 aaPredicted RBP10.7□□□□□ -0.7
RPA3-205ENST00000462723 LMOD3Q0VAK6 560 aa10.7□□□□□ -0.7
RPA3-205ENST00000462723 TMEM92Q6UXU6 159 aa10.7□□□□□ -0.7
RPA3-205ENST00000462723 ANKRD24Q8TF21 1146 aa10.7□□□□□ -0.7
RPA3-205ENST00000462723 CDCA7LQ96GN5 454 aa10.7□□□□□ -0.7
RPA3-205ENST00000462723 PHACTR3Q96KR7 559 aa10.7□□□□□ -0.7
RPA3-205ENST00000462723 PRDM11Q9NQV5 511 aa10.7□□□□□ -0.7
RPA3-205ENST00000462723 FAM208AQ9UK61 1670 aaKnown RBP10.69□□□□□ -0.7
RPA3-205ENST00000462723 COL16A1Q07092 1604 aaPredicted RBP10.69□□□□□ -0.7
RPA3-205ENST00000462723 E9PSI1 815 aa10.69□□□□□ -0.7
RPA3-205ENST00000462723 DLG5Q8TDM6 1919 aa10.68□□□□□ -0.7
RPA3-205ENST00000462723 RGPD2P0DJD1 1756 aa10.68□□□□□ -0.7
RPA3-205ENST00000462723 CALD1Q05682 793 aaKnown RBP10.68□□□□□ -0.7
RPA3-205ENST00000462723 SLFN5Q08AF3 891 aa10.68□□□□□ -0.7
RPA3-205ENST00000462723 CHRNA2Q15822 529 aa10.68□□□□□ -0.7
RPA3-205ENST00000462723 NBPF6Q5VWK0 638 aa10.68□□□□□ -0.7
RPA3-205ENST00000462723 NBPF4Q96M43 638 aa10.68□□□□□ -0.7
RPA3-205ENST00000462723 PLA2G2EQ9NZK7 142 aa10.68□□□□□ -0.7
RPA3-205ENST00000462723 AXIN2Q9Y2T1 843 aa10.68□□□□□ -0.7
RPA3-205ENST00000462723 CAMTA1Q9Y6Y1 1673 aa10.67□□□□□ -0.7
RPA3-205ENST00000462723 CSB-PGBD3P0DP91 1061 aa10.67□□□□□ -0.7
RPA3-205ENST00000462723 GAS2L2Q8NHY3 880 aa10.67□□□□□ -0.7
RPA3-205ENST00000462723 IL16Q14005 1332 aa10.66□□□□□ -0.7
RPA3-205ENST00000462723 NEFLP07196 543 aa10.66□□□□□ -0.7
RPA3-205ENST00000462723 LSM11P83369 360 aaKnown RBP eCLIP10.66□□□□□ -0.7
RPA3-205ENST00000462723 DUSP27Q5VZP5 1158 aa10.66□□□□□ -0.7
RPA3-205ENST00000462723 TRMT2AQ8IZ69 625 aaKnown RBP10.66□□□□□ -0.7
RPA3-205ENST00000462723 USHBP1Q8N6Y0 703 aa10.66□□□□□ -0.7
RPA3-205ENST00000462723 MYH16Q9H6N6 1097 aa10.66□□□□□ -0.7
RPA3-205ENST00000462723 NLRP2Q9NX02 1062 aa10.66□□□□□ -0.7
RPA3-205ENST00000462723 LMO7Q8WWI1 1683 aa10.66□□□□□ -0.7
RPA3-205ENST00000462723 NCAPD2Q15021 1401 aa10.66□□□□□ -0.7
RPA3-205ENST00000462723 MICALL2Q8IY33 904 aa10.65□□□□□ -0.7
RPA3-205ENST00000462723 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.65□□□□□ -0.7
RPA3-205ENST00000462723 COL14A1Q05707 1796 aaKnown RBP10.65□□□□□ -0.71
RPA3-205ENST00000462723 MTHFSDQ2M296 383 aaKnown RBP10.64□□□□□ -0.71
RPA3-205ENST00000462723 ARSIQ5FYB1 569 aa10.64□□□□□ -0.71
RPA3-205ENST00000462723 RCAN3Q9UKA8 241 aa10.64□□□□□ -0.71
RPA3-205ENST00000462723 SUPT16HQ9Y5B9 1047 aaKnown RBP10.64□□□□□ -0.71
RPA3-205ENST00000462723 GTF3C3Q9Y5Q9 886 aa10.64□□□□□ -0.71
RPA3-205ENST00000462723 WDR17Q8IZU2 1322 aa10.63□□□□□ -0.71
RPA3-205ENST00000462723 COL5A2P05997 1499 aaPredicted RBP10.63□□□□□ -0.71
RPA3-205ENST00000462723 HTATSF1O43719 755 aaKnown RBP10.63□□□□□ -0.71
RPA3-205ENST00000462723 AMOTQ4VCS5 1084 aa10.63□□□□□ -0.71
RPA3-205ENST00000462723 PLEKHO1Q53GL0 409 aaPredicted RBP10.63□□□□□ -0.71
RPA3-205ENST00000462723 RAPGEF4Q8WZA2 1011 aa10.63□□□□□ -0.71
RPA3-205ENST00000462723 RTF1Q92541 710 aaKnown RBP10.63□□□□□ -0.71
RPA3-205ENST00000462723 FAM83GA6ND36 823 aa10.62□□□□□ -0.71
RPA3-205ENST00000462723 EVA1CP58658 441 aa10.62□□□□□ -0.71
RPA3-205ENST00000462723 GNAI1P63096 354 aa10.62□□□□□ -0.71
RPA3-205ENST00000462723 PLCB2Q00722 1185 aa10.62□□□□□ -0.71
RPA3-205ENST00000462723 EFCAB3Q8N7B9 438 aa10.62□□□□□ -0.71
RPA3-205ENST00000462723 MAP3K5Q99683 1374 aa10.62□□□□□ -0.71
RPA3-205ENST00000462723 PLEKHG2Q9H7P9 1386 aa10.62□□□□□ -0.71
RPA3-205ENST00000462723 JCADQ9P266 1359 aa10.62□□□□□ -0.71
RPA3-205ENST00000462723 GNAT3A8MTJ3 354 aa10.61□□□□□ -0.71
RPA3-205ENST00000462723 RGL2O15211 777 aa10.61□□□□□ -0.71
RPA3-205ENST00000462723 TATP17735 454 aaPredicted RBP10.61□□□□□ -0.71
RPA3-205ENST00000462723 TOM1L2Q6ZVM7 507 aa10.61□□□□□ -0.71
RPA3-205ENST00000462723 THUMPD2Q9BTF0 503 aaKnown RBP10.61□□□□□ -0.71
RPA3-205ENST00000462723 IFT57Q9NWB7 429 aa10.61□□□□□ -0.71
RPA3-205ENST00000462723 FANCIQ9NVI1 1328 aa10.6□□□□□ -0.71
RPA3-205ENST00000462723 CARD10Q9BWT7 1032 aa10.6□□□□□ -0.71
RPA3-205ENST00000462723 STRN4Q9NRL3 753 aa10.6□□□□□ -0.71
RPA3-205ENST00000462723 BTG4Q9NY30 223 aa10.6□□□□□ -0.71
RPA3-205ENST00000462723 TAOK2Q9UL54 1235 aa10.6□□□□□ -0.71
RPA3-205ENST00000462723 LAS1LQ9Y4W2 734 aaKnown RBP10.6□□□□□ -0.71
RPA3-205ENST00000462723 PARP4Q9UKK3 1724 aaKnown RBP10.59□□□□□ -0.71
RPA3-205ENST00000462723 NUTM2BA6NNL0 878 aaPredicted RBP10.59□□□□□ -0.71
RPA3-205ENST00000462723 NUTM2EB1AL46 878 aaPredicted RBP10.59□□□□□ -0.71
RPA3-205ENST00000462723 ADAMTS2O95450 1211 aa10.59□□□□□ -0.71
RPA3-205ENST00000462723 CT47B1P0C2W7 299 aaPredicted RBP10.59□□□□□ -0.71
RPA3-205ENST00000462723 DCTN1Q14203 1278 aa10.59□□□□□ -0.71
RPA3-205ENST00000462723 AKAP4Q5JQC9 854 aa10.59□□□□□ -0.71
RPA3-205ENST00000462723 C1orf141Q5JVX7 400 aa10.59□□□□□ -0.71
RPA3-205ENST00000462723 ZNF530Q6P9A1 599 aaPredicted RBP10.59□□□□□ -0.71
RPA3-205ENST00000462723 MCM10Q7L590 875 aa10.59□□□□□ -0.71
RPA3-205ENST00000462723 NUTM2AQ8IVF1 878 aaPredicted RBP10.59□□□□□ -0.71
RPA3-205ENST00000462723 TSR2Q969E8 191 aaKnown RBP10.59□□□□□ -0.71
RPA3-205ENST00000462723 CFAP44Q96MT7 982 aa10.59□□□□□ -0.71
RPA3-205ENST00000462723 HCSTQ9UBK5 93 aa10.59□□□□□ -0.71
RPA3-205ENST00000462723 SPG7Q9UQ90 795 aa10.59□□□□□ -0.71
RPA3-205ENST00000462723 PLCH1Q4KWH8 1693 aa10.59□□□□□ -0.71
RPA3-205ENST00000462723 RNF123Q5XPI4 1314 aa10.58□□□□□ -0.71
RPA3-205ENST00000462723 CRB1P82279 1406 aa10.58□□□□□ -0.72
RPA3-205ENST00000462723 ZNF853P0CG23 659 aa10.58□□□□□ -0.72
RPA3-205ENST00000462723 LARP1Q6PKG0 1096 aaKnown RBP10.58□□□□□ -0.72
RPA3-205ENST00000462723 LRRC37A3O60309 1634 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms