RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 ERC2O15083 957 aa20.82■□□□□ 0.92
ACTB-207ENST00000462494 RBM33Q96EV2 1170 aaKnown RBP20.82■□□□□ 0.92
ACTB-207ENST00000462494 LRRCC1Q9C099 1032 aa20.82■□□□□ 0.92
ACTB-207ENST00000462494 XRN1Q8IZH2 1706 aaKnown RBP20.82■□□□□ 0.92
ACTB-207ENST00000462494 ZBTB7CA1YPR0 619 aa20.81■□□□□ 0.92
ACTB-207ENST00000462494 OSBPL3Q9H4L5 887 aa20.81■□□□□ 0.92
ACTB-207ENST00000462494 ST18O60284 1047 aa20.81■□□□□ 0.92
ACTB-207ENST00000462494 MRE11P49959 708 aa20.81■□□□□ 0.92
ACTB-207ENST00000462494 LRRFIP2Q9Y608 721 aaKnown RBP20.81■□□□□ 0.92
ACTB-207ENST00000462494 SKOR2Q2VWA4 1001 aaPredicted RBP20.8■□□□□ 0.92
ACTB-207ENST00000462494 LRRC37A3O60309 1634 aa20.8■□□□□ 0.92
ACTB-207ENST00000462494 NWD1Q149M9 1564 aa20.8■□□□□ 0.92
ACTB-207ENST00000462494 PTMSP20962 102 aa20.8■□□□□ 0.92
ACTB-207ENST00000462494 ATP8B2P98198 1209 aa20.8■□□□□ 0.92
ACTB-207ENST00000462494 GOLGA6L22H0YM25 854 aa20.79■□□□□ 0.92
ACTB-207ENST00000462494 HDGFL1Q5TGJ6 251 aa20.79■□□□□ 0.92
ACTB-207ENST00000462494 GRPEL1Q9HAV7 217 aa20.79■□□□□ 0.92
ACTB-207ENST00000462494 FAM208AQ9UK61 1670 aaKnown RBP20.78■□□□□ 0.92
ACTB-207ENST00000462494 PHF8Q9UPP1 1060 aa20.78■□□□□ 0.92
ACTB-207ENST00000462494 AK9Q5TCS8 1911 aa20.78■□□□□ 0.92
ACTB-207ENST00000462494 MARF1Q9Y4F3 1742 aaKnown RBP20.78■□□□□ 0.92
ACTB-207ENST00000462494 MX1P20591 662 aa20.78■□□□□ 0.92
ACTB-207ENST00000462494 PHAXQ9H814 394 aaKnown RBP20.78■□□□□ 0.92
ACTB-207ENST00000462494 EIF2S2P20042 333 aaKnown RBP20.77■□□□□ 0.92
ACTB-207ENST00000462494 RILPL2Q969X0 211 aa20.77■□□□□ 0.92
ACTB-207ENST00000462494 ANO8Q9HCE9 1232 aaPredicted RBP20.77■□□□□ 0.92
ACTB-207ENST00000462494 TRIM6-TRIM34B2RNG4 842 aa20.77■□□□□ 0.91
ACTB-207ENST00000462494 BAG4O95429 457 aaKnown RBP20.77■□□□□ 0.91
ACTB-207ENST00000462494 UBTFL1P0CB47 393 aaPredicted RBP20.76■□□□□ 0.91
ACTB-207ENST00000462494 USP44Q9H0E7 712 aa20.76■□□□□ 0.91
ACTB-207ENST00000462494 PLEKHG5O94827 1062 aa20.76■□□□□ 0.91
ACTB-207ENST00000462494 BABAM1Q9NWV8 329 aa20.76■□□□□ 0.91
ACTB-207ENST00000462494 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.76■□□□□ 0.91
ACTB-207ENST00000462494 NUCB2P80303 420 aa20.75■□□□□ 0.91
ACTB-207ENST00000462494 SOS1Q07889 1333 aaPredicted RBP20.75■□□□□ 0.91
ACTB-207ENST00000462494 IBTKQ9P2D0 1353 aaPredicted RBP20.74■□□□□ 0.91
ACTB-207ENST00000462494 SALL3Q9BXA9 1300 aa20.74■□□□□ 0.91
ACTB-207ENST00000462494 ZGPATQ8N5A5 531 aaKnown RBP20.74■□□□□ 0.91
ACTB-207ENST00000462494 RRAGDQ9NQL2 400 aaPredicted RBP20.74■□□□□ 0.91
ACTB-207ENST00000462494 PKP1Q13835 747 aa20.74■□□□□ 0.91
ACTB-207ENST00000462494 NBPF6Q5VWK0 638 aa20.74■□□□□ 0.91
ACTB-207ENST00000462494 IP6K1Q92551 441 aa20.74■□□□□ 0.91
ACTB-207ENST00000462494 NBPF4Q96M43 638 aa20.74■□□□□ 0.91
ACTB-207ENST00000462494 SETD1BQ9UPS6 1966 aaKnown RBP20.73■□□□□ 0.91
ACTB-207ENST00000462494 MCTP1Q6DN14 999 aa20.73■□□□□ 0.91
ACTB-207ENST00000462494 GAS2L3Q86XJ1 694 aa20.73■□□□□ 0.91
ACTB-207ENST00000462494 ESYT1Q9BSJ8 1104 aa20.73■□□□□ 0.91
ACTB-207ENST00000462494 LGR6Q9HBX8 967 aa20.73■□□□□ 0.91
ACTB-207ENST00000462494 PSME1Q06323 249 aa20.73■□□□□ 0.91
ACTB-207ENST00000462494 ESCO1Q5FWF5 840 aa20.73■□□□□ 0.91
ACTB-207ENST00000462494 CLEC17AQ6ZS10 378 aa20.73■□□□□ 0.91
ACTB-207ENST00000462494 IL1RAPL2Q9NP60 686 aa20.73■□□□□ 0.91
ACTB-207ENST00000462494 ISY1Q9ULR0 285 aaKnown RBP20.73■□□□□ 0.91
ACTB-207ENST00000462494 DDX49Q9Y6V7 483 aaKnown RBP20.73■□□□□ 0.91
ACTB-207ENST00000462494 NEK4P51957 841 aa20.72■□□□□ 0.91
ACTB-207ENST00000462494 CWC22Q9HCG8 908 aaKnown RBP20.72■□□□□ 0.91
ACTB-207ENST00000462494 LTN1O94822 1766 aa20.71■□□□□ 0.91
ACTB-207ENST00000462494 CACNA1FO60840 1977 aa20.71■□□□□ 0.91
ACTB-207ENST00000462494 SRCIN1Q9C0H9 1055 aa20.7■□□□□ 0.9
ACTB-207ENST00000462494 ANO2Q9NQ90 1003 aa20.7■□□□□ 0.9
ACTB-207ENST00000462494 CHMLP26374 656 aa20.7■□□□□ 0.9
ACTB-207ENST00000462494 EIF4A1P60842 406 aaKnown RBP20.69■□□□□ 0.9
ACTB-207ENST00000462494 PPP1R42Q7Z4L9 355 aa20.69■□□□□ 0.9
ACTB-207ENST00000462494 NUTM1Q86Y26 1132 aa20.69■□□□□ 0.9
ACTB-207ENST00000462494 LRRC59Q96AG4 307 aaKnown RBP20.69■□□□□ 0.9
ACTB-207ENST00000462494 CHPF2Q9P2E5 772 aa20.69■□□□□ 0.9
ACTB-207ENST00000462494 USP54Q70EL1 1684 aa20.69■□□□□ 0.9
ACTB-207ENST00000462494 KCNQ3O43525 872 aa20.69■□□□□ 0.9
ACTB-207ENST00000462494 SURF6O75683 361 aaKnown RBP20.69■□□□□ 0.9
ACTB-207ENST00000462494 CYP2E1P05181 493 aaPredicted RBP20.69■□□□□ 0.9
ACTB-207ENST00000462494 MCCP23508 829 aa20.69■□□□□ 0.9
ACTB-207ENST00000462494 ANKLE2Q86XL3 938 aa20.69■□□□□ 0.9
ACTB-207ENST00000462494 UNC5CLQ8IV45 518 aa20.69■□□□□ 0.9
ACTB-207ENST00000462494 PXDNLA1KZ92 1463 aa20.69■□□□□ 0.9
ACTB-207ENST00000462494 NCLP19338 710 aaKnown RBP20.68■□□□□ 0.9
ACTB-207ENST00000462494 KLHL40Q2TBA0 621 aa20.68■□□□□ 0.9
ACTB-207ENST00000462494 STAP2Q9UGK3 403 aa20.68■□□□□ 0.9
ACTB-207ENST00000462494 CEMIPQ8WUJ3 1361 aa20.68■□□□□ 0.9
ACTB-207ENST00000462494 TEFQ10587 303 aa20.68■□□□□ 0.9
ACTB-207ENST00000462494 SSH3Q8TE77 659 aa20.68■□□□□ 0.9
ACTB-207ENST00000462494 ANXA1P04083 346 aa20.67■□□□□ 0.9
ACTB-207ENST00000462494 PALD1Q9ULE6 856 aa20.67■□□□□ 0.9
ACTB-207ENST00000462494 BTBD11A6QL63 1104 aa20.66■□□□□ 0.9
ACTB-207ENST00000462494 MAP4K4O95819 1239 aaPredicted RBP20.66■□□□□ 0.9
ACTB-207ENST00000462494 ZNF530Q6P9A1 599 aaPredicted RBP20.66■□□□□ 0.9
ACTB-207ENST00000462494 MPRIPQ6WCQ1 1025 aa20.66■□□□□ 0.9
ACTB-207ENST00000462494 NOL8Q76FK4 1167 aaKnown RBP20.66■□□□□ 0.9
ACTB-207ENST00000462494 PI4KAP2A4QPH2 592 aa20.66■□□□□ 0.9
ACTB-207ENST00000462494 SRGAP3O43295 1099 aa20.66■□□□□ 0.9
ACTB-207ENST00000462494 NBPF7P0C2Y1 421 aaPredicted RBP20.66■□□□□ 0.9
ACTB-207ENST00000462494 PI4KAP1Q8N8J0 262 aa20.66■□□□□ 0.9
ACTB-207ENST00000462494 XPCQ01831 940 aaPredicted RBP20.65■□□□□ 0.9
ACTB-207ENST00000462494 KCNH5Q8NCM2 988 aa20.65■□□□□ 0.9
ACTB-207ENST00000462494 TMX3Q96JJ7 454 aa20.65■□□□□ 0.9
ACTB-207ENST00000462494 FOXD4L5Q5VV16 416 aaPredicted RBP20.65■□□□□ 0.9
ACTB-207ENST00000462494 FOXD4L4Q8WXT5 416 aaPredicted RBP20.65■□□□□ 0.9
ACTB-207ENST00000462494 DNAAF4Q8WXU2 420 aa20.65■□□□□ 0.9
ACTB-207ENST00000462494 RAB11FIP3O75154 756 aa20.64■□□□□ 0.89
ACTB-207ENST00000462494 LMOD2Q6P5Q4 547 aa20.64■□□□□ 0.89
ACTB-207ENST00000462494 NFAT5O94916 1531 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms