RNA–Protein interactions for RNA: ENST00000462129.1

RER1-206, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-206ENST00000462129 MAP2P11137 1827 aaKnown RBP24.22■■□□□ 1.47
RER1-206ENST00000462129 PKD1L3Q7Z443 1732 aa24.22■■□□□ 1.47
RER1-206ENST00000462129 KIF24Q5T7B8 1368 aa24.22■■□□□ 1.47
RER1-206ENST00000462129 PIGBQ92521 554 aa24.21■■□□□ 1.47
RER1-206ENST00000462129 SSFA2P28290 1259 aa24.19■■□□□ 1.46
RER1-206ENST00000462129 LINC00116Q8NCU8 138 aa24.18■■□□□ 1.46
RER1-206ENST00000462129 EMILIN1Q9Y6C2 1016 aa24.18■■□□□ 1.46
RER1-206ENST00000462129 LOC102724428A0A0B4J2F2 783 aa24.17■■□□□ 1.46
RER1-206ENST00000462129 SIK1P57059 783 aa24.17■■□□□ 1.46
RER1-206ENST00000462129 POLKQ9UBT6 870 aa24.17■■□□□ 1.46
RER1-206ENST00000462129 CFAP53Q96M91 514 aa24.16■■□□□ 1.46
RER1-206ENST00000462129 GNPATO15228 680 aa24.15■■□□□ 1.46
RER1-206ENST00000462129 KIF3CO14782 793 aa24.14■■□□□ 1.45
RER1-206ENST00000462129 NCAPD2Q15021 1401 aa24.14■■□□□ 1.45
RER1-206ENST00000462129 NKX1-1Q15270 411 aaPredicted RBP24.14■■□□□ 1.45
RER1-206ENST00000462129 PRKRIP1Q9H875 184 aaPredicted RBP24.14■■□□□ 1.45
RER1-206ENST00000462129 TMOD3Q9NYL9 352 aa24.14■■□□□ 1.45
RER1-206ENST00000462129 SPG7Q9UQ90 795 aa24.14■■□□□ 1.45
RER1-206ENST00000462129 CICQ96RK0 1608 aaPredicted RBP24.13■■□□□ 1.45
RER1-206ENST00000462129 MYBBP1AQ9BQG0 1328 aaKnown RBP24.13■■□□□ 1.45
RER1-206ENST00000462129 PPP2R1AP30153 589 aa24.13■■□□□ 1.45
RER1-206ENST00000462129 MTHFSP49914 203 aa24.13■■□□□ 1.45
RER1-206ENST00000462129 ITPK1Q13572 414 aa24.12■■□□□ 1.45
RER1-206ENST00000462129 DIEXFQ68CQ4 756 aaKnown RBP24.12■■□□□ 1.45
RER1-206ENST00000462129 ASAP1Q9ULH1 1129 aa24.11■■□□□ 1.45
RER1-206ENST00000462129 MMP10P09238 476 aa24.1■■□□□ 1.45
RER1-206ENST00000462129 ATP6V1AP38606 617 aa24.1■■□□□ 1.45
RER1-206ENST00000462129 PXDNLA1KZ92 1463 aa24.1■■□□□ 1.45
RER1-206ENST00000462129 EYA1Q99502 592 aa24.06■■□□□ 1.44
RER1-206ENST00000462129 KIF13BQ9NQT8 1826 aa24.05■■□□□ 1.44
RER1-206ENST00000462129 KIAA1551Q9HCM1 1747 aa24.05■■□□□ 1.44
RER1-206ENST00000462129 PHKG2P15735 406 aa24.05■■□□□ 1.44
RER1-206ENST00000462129 IFNL2Q8IZJ0 200 aa24.05■■□□□ 1.44
RER1-206ENST00000462129 ATG3Q9NT62 314 aa24.05■■□□□ 1.44
RER1-206ENST00000462129 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.05■■□□□ 1.44
RER1-206ENST00000462129 BCS1LQ9Y276 419 aa24.05■■□□□ 1.44
RER1-206ENST00000462129 N4BP2Q86UW6 1770 aaPredicted RBP24.05■■□□□ 1.44
RER1-206ENST00000462129 DIAPH1O60610 1272 aaKnown RBP24.04■■□□□ 1.44
RER1-206ENST00000462129 APLP1P51693 650 aa24.04■■□□□ 1.44
RER1-206ENST00000462129 C10orf71Q711Q0 1435 aa24.03■■□□□ 1.44
RER1-206ENST00000462129 TGFB2P61812 414 aa24.03■■□□□ 1.44
RER1-206ENST00000462129 NUDCQ9Y266 331 aa24.03■■□□□ 1.44
RER1-206ENST00000462129 RTCBQ9Y3I0 505 aaKnown RBP24.03■■□□□ 1.44
RER1-206ENST00000462129 KDRP35968 1356 aa24.03■■□□□ 1.44
RER1-206ENST00000462129 A0A0G2JLW4 131 aa24.02■■□□□ 1.44
RER1-206ENST00000462129 EIF4A2Q14240 407 aaKnown RBP24.01■■□□□ 1.43
RER1-206ENST00000462129 TRAPPC3LQ5T215 181 aa24.01■■□□□ 1.43
RER1-206ENST00000462129 TOMM70O94826 608 aa24■■□□□ 1.43
RER1-206ENST00000462129 ARHGAP27Q6ZUM4 889 aa24■■□□□ 1.43
RER1-206ENST00000462129 NLGN1Q8N2Q7 840 aa23.99■■□□□ 1.43
RER1-206ENST00000462129 RBM42Q9BTD8 480 aaKnown RBP23.99■■□□□ 1.43
RER1-206ENST00000462129 CCDC87Q9NVE4 849 aa23.99■■□□□ 1.43
RER1-206ENST00000462129 C4AP0C0L4 1744 aa23.98■■□□□ 1.43
RER1-206ENST00000462129 FCHSD2O94868 740 aa23.98■■□□□ 1.43
RER1-206ENST00000462129 NMRK2Q9NPI5 230 aa23.98■■□□□ 1.43
RER1-206ENST00000462129 U2SURPO15042 1029 aaKnown RBP23.97■■□□□ 1.43
RER1-206ENST00000462129 DPEP1P16444 411 aa23.97■■□□□ 1.43
RER1-206ENST00000462129 ARHGEF1Q92888 912 aaKnown RBP23.97■■□□□ 1.43
RER1-206ENST00000462129 SLC4A9Q96Q91 983 aa23.97■■□□□ 1.43
RER1-206ENST00000462129 ADRA2BP18089 450 aa23.96■■□□□ 1.43
RER1-206ENST00000462129 GYS1P13807 737 aa23.95■■□□□ 1.42
RER1-206ENST00000462129 RFC4P35249 363 aa23.95■■□□□ 1.42
RER1-206ENST00000462129 PARP3Q9Y6F1 533 aa23.95■■□□□ 1.42
RER1-206ENST00000462129 COL5A3P25940 1745 aaPredicted RBP23.95■■□□□ 1.42
RER1-206ENST00000462129 ZNF831Q5JPB2 1677 aa23.95■■□□□ 1.42
RER1-206ENST00000462129 CNTNAP4Q9C0A0 1308 aa23.94■■□□□ 1.42
RER1-206ENST00000462129 IL13P35225 146 aa23.94■■□□□ 1.42
RER1-206ENST00000462129 RC3H1Q5TC82 1133 aaKnown RBP23.94■■□□□ 1.42
RER1-206ENST00000462129 COL3A1P02461 1466 aaPredicted RBP23.94■■□□□ 1.42
RER1-206ENST00000462129 WDR43Q15061 677 aaKnown RBP eCLIP23.93■■□□□ 1.42
RER1-206ENST00000462129 DNAJC5GQ8N7S2 189 aa23.93■■□□□ 1.42
RER1-206ENST00000462129 BRCA1P38398 1863 aaKnown RBP23.93■■□□□ 1.42
RER1-206ENST00000462129 PLEKHG2Q9H7P9 1386 aa23.92■■□□□ 1.42
RER1-206ENST00000462129 ERVV-2B6SEH9 535 aa23.92■■□□□ 1.42
RER1-206ENST00000462129 C9orf131Q5VYM1 1079 aa23.92■■□□□ 1.42
RER1-206ENST00000462129 MRS2Q9HD23 443 aa23.92■■□□□ 1.42
RER1-206ENST00000462129 RPS6KA4O75676 772 aa23.91■■□□□ 1.42
RER1-206ENST00000462129 HSP90AB1P08238 724 aaKnown RBP23.91■■□□□ 1.42
RER1-206ENST00000462129 C16orf71Q8IYS4 520 aaPredicted RBP23.91■■□□□ 1.42
RER1-206ENST00000462129 WDR90Q96KV7 1748 aa23.9■■□□□ 1.42
RER1-206ENST00000462129 U2AF1L5P0DN76 240 aaPredicted RBP23.9■■□□□ 1.42
RER1-206ENST00000462129 U2AF1Q01081 240 aaKnown RBP eCLIP23.9■■□□□ 1.42
RER1-206ENST00000462129 DCAF5Q96JK2 942 aa23.9■■□□□ 1.42
RER1-206ENST00000462129 NEFMP07197 916 aa23.89■■□□□ 1.41
RER1-206ENST00000462129 SULT6B1Q6IMI4 303 aa23.89■■□□□ 1.41
RER1-206ENST00000462129 RBM46Q8TBY0 533 aaKnown RBP23.89■■□□□ 1.41
RER1-206ENST00000462129 KDM6AO15550 1401 aaPredicted RBP23.89■■□□□ 1.41
RER1-206ENST00000462129 CABP4P57796 275 aa23.88■■□□□ 1.41
RER1-206ENST00000462129 PNNQ9H307 717 aaKnown RBP23.88■■□□□ 1.41
RER1-206ENST00000462129 ARFGEF1Q9Y6D6 1849 aa23.88■■□□□ 1.41
RER1-206ENST00000462129 KCNA3P22001 575 aa23.87■■□□□ 1.41
RER1-206ENST00000462129 PLEKHO1Q53GL0 409 aaPredicted RBP23.87■■□□□ 1.41
RER1-206ENST00000462129 ZNF530Q6P9A1 599 aaPredicted RBP23.87■■□□□ 1.41
RER1-206ENST00000462129 PIM2Q9P1W9 311 aa23.87■■□□□ 1.41
RER1-206ENST00000462129 KCPQ6ZWJ8 1503 aa23.86■■□□□ 1.41
RER1-206ENST00000462129 MYH14Q7Z406 1995 aaKnown RBP23.86■■□□□ 1.41
RER1-206ENST00000462129 HMOX1P09601 288 aa23.86■■□□□ 1.41
RER1-206ENST00000462129 HTRA3P83110 453 aa23.86■■□□□ 1.41
RER1-206ENST00000462129 SRP68Q9UHB9 627 aaKnown RBP23.86■■□□□ 1.41
RER1-206ENST00000462129 PTCD1O75127 700 aaKnown RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms