RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 CSB-PGBD3P0DP91 1061 aa15.63■□□□□ 0.09
COL4A6-204ENST00000461897 PKD1L3Q7Z443 1732 aa15.63■□□□□ 0.09
COL4A6-204ENST00000461897 OVOS2A0A0G2JMS6 1433 aa15.63■□□□□ 0.09
COL4A6-204ENST00000461897 TAF7Q15545 349 aaPredicted RBP15.63■□□□□ 0.09
COL4A6-204ENST00000461897 SMC5Q8IY18 1101 aa15.63■□□□□ 0.09
COL4A6-204ENST00000461897 TMEM57Q8N5G2 664 aa15.63■□□□□ 0.09
COL4A6-204ENST00000461897 BABAM1Q9NWV8 329 aa15.63■□□□□ 0.09
COL4A6-204ENST00000461897 SIPA1L3O60292 1781 aaPredicted RBP15.62■□□□□ 0.09
COL4A6-204ENST00000461897 HAP1P54257 671 aaPredicted RBP15.62■□□□□ 0.09
COL4A6-204ENST00000461897 RAPGEF4Q8WZA2 1011 aa15.62■□□□□ 0.09
COL4A6-204ENST00000461897 ARHGAP45Q92619 1136 aa15.62■□□□□ 0.09
COL4A6-204ENST00000461897 C1orf141Q5JVX7 400 aa15.61■□□□□ 0.09
COL4A6-204ENST00000461897 MPRIPQ6WCQ1 1025 aa15.61■□□□□ 0.09
COL4A6-204ENST00000461897 PLEKHG2Q9H7P9 1386 aa15.61■□□□□ 0.09
COL4A6-204ENST00000461897 COL22A1Q8NFW1 1626 aaPredicted RBP15.61■□□□□ 0.09
COL4A6-204ENST00000461897 ITPRIPQ8IWB1 547 aa15.61■□□□□ 0.09
COL4A6-204ENST00000461897 WDR17Q8IZU2 1322 aa15.61■□□□□ 0.09
COL4A6-204ENST00000461897 ABCC4O15439 1325 aa15.6■□□□□ 0.09
COL4A6-204ENST00000461897 RNMTO43148 476 aaKnown RBP15.6■□□□□ 0.09
COL4A6-204ENST00000461897 TBC1D2Q9BYX2 928 aa15.6■□□□□ 0.09
COL4A6-204ENST00000461897 SCN11AQ9UI33 1791 aa15.6■□□□□ 0.09
COL4A6-204ENST00000461897 RGS12O14924 1447 aa15.59■□□□□ 0.09
COL4A6-204ENST00000461897 TATP17735 454 aaPredicted RBP15.59■□□□□ 0.09
COL4A6-204ENST00000461897 PARP4Q9UKK3 1724 aaKnown RBP15.59■□□□□ 0.09
COL4A6-204ENST00000461897 ZBTB40Q9NUA8 1239 aa15.59■□□□□ 0.09
COL4A6-204ENST00000461897 COL16A1Q07092 1604 aaPredicted RBP15.58■□□□□ 0.08
COL4A6-204ENST00000461897 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.58■□□□□ 0.08
COL4A6-204ENST00000461897 BRPF3Q9ULD4 1205 aa15.58■□□□□ 0.08
COL4A6-204ENST00000461897 KDM6AO15550 1401 aaPredicted RBP15.58■□□□□ 0.08
COL4A6-204ENST00000461897 TEFQ10587 303 aa15.57■□□□□ 0.08
COL4A6-204ENST00000461897 PHLPP1O60346 1717 aa15.57■□□□□ 0.08
COL4A6-204ENST00000461897 API5Q9BZZ5 524 aaKnown RBP15.57■□□□□ 0.08
COL4A6-204ENST00000461897 SOS1Q07889 1333 aaPredicted RBP15.56■□□□□ 0.08
COL4A6-204ENST00000461897 PHKG2P15735 406 aa15.56■□□□□ 0.08
COL4A6-204ENST00000461897 SPG7Q9UQ90 795 aa15.56■□□□□ 0.08
COL4A6-204ENST00000461897 TOM1L2Q6ZVM7 507 aa15.55■□□□□ 0.08
COL4A6-204ENST00000461897 CACNA1FO60840 1977 aa15.55■□□□□ 0.08
COL4A6-204ENST00000461897 COL14A1Q05707 1796 aaKnown RBP15.55■□□□□ 0.08
COL4A6-204ENST00000461897 KCNQ3O43525 872 aa15.54■□□□□ 0.08
COL4A6-204ENST00000461897 SLC4A2P04920 1241 aa15.54■□□□□ 0.08
COL4A6-204ENST00000461897 EIF4A1P60842 406 aaKnown RBP15.54■□□□□ 0.08
COL4A6-204ENST00000461897 C22orf23Q9BZE7 217 aa15.54■□□□□ 0.08
COL4A6-204ENST00000461897 MRC1P22897 1456 aa15.54■□□□□ 0.08
COL4A6-204ENST00000461897 SHANK3Q9BYB0 1731 aa15.54■□□□□ 0.08
COL4A6-204ENST00000461897 PTPRCP08575 1304 aa15.54■□□□□ 0.08
COL4A6-204ENST00000461897 BTBD11A6QL63 1104 aa15.54■□□□□ 0.08
COL4A6-204ENST00000461897 CYP27B1O15528 508 aa15.54■□□□□ 0.08
COL4A6-204ENST00000461897 NUCB1Q02818 461 aa15.53■□□□□ 0.08
COL4A6-204ENST00000461897 LARP1Q6PKG0 1096 aaKnown RBP15.53■□□□□ 0.08
COL4A6-204ENST00000461897 G2E3Q7L622 706 aa15.53■□□□□ 0.08
COL4A6-204ENST00000461897 IFNL2Q8IZJ0 200 aa15.53■□□□□ 0.08
COL4A6-204ENST00000461897 SLKQ9H2G2 1235 aaPredicted RBP15.53■□□□□ 0.08
COL4A6-204ENST00000461897 STRN4Q9NRL3 753 aa15.53■□□□□ 0.08
COL4A6-204ENST00000461897 ZBTB7BO15156 539 aaPredicted RBP15.52■□□□□ 0.08
COL4A6-204ENST00000461897 CCDC30Q5VVM6 783 aa15.52■□□□□ 0.08
COL4A6-204ENST00000461897 CARD10Q9BWT7 1032 aa15.52■□□□□ 0.08
COL4A6-204ENST00000461897 CHMP4BQ9H444 224 aaKnown RBP15.52■□□□□ 0.07
COL4A6-204ENST00000461897 NECTIN2Q92692 538 aa15.51■□□□□ 0.07
COL4A6-204ENST00000461897 STK31Q9BXU1 1019 aa15.51■□□□□ 0.07
COL4A6-204ENST00000461897 HEG1Q9ULI3 1381 aa15.51■□□□□ 0.07
COL4A6-204ENST00000461897 HOXB7P09629 217 aa15.5■□□□□ 0.07
COL4A6-204ENST00000461897 RBM25P49756 843 aaKnown RBP15.5■□□□□ 0.07
COL4A6-204ENST00000461897 HDGFL1Q5TGJ6 251 aa15.5■□□□□ 0.07
COL4A6-204ENST00000461897 INTS3Q68E01 1043 aaKnown RBP15.5■□□□□ 0.07
COL4A6-204ENST00000461897 SLC52A2Q9HAB3 445 aa15.5■□□□□ 0.07
COL4A6-204ENST00000461897 BTG4Q9NY30 223 aa15.5■□□□□ 0.07
COL4A6-204ENST00000461897 PLCH1Q4KWH8 1693 aa15.49■□□□□ 0.07
COL4A6-204ENST00000461897 EVA1CP58658 441 aa15.49■□□□□ 0.07
COL4A6-204ENST00000461897 SNX21Q969T3 373 aa15.49■□□□□ 0.07
COL4A6-204ENST00000461897 DCAF5Q96JK2 942 aa15.49■□□□□ 0.07
COL4A6-204ENST00000461897 CHMP5Q9NZZ3 219 aa15.49■□□□□ 0.07
COL4A6-204ENST00000461897 N4BP2Q86UW6 1770 aaPredicted RBP15.49■□□□□ 0.07
COL4A6-204ENST00000461897 TOM1O60784 492 aa15.48■□□□□ 0.07
COL4A6-204ENST00000461897 IL2RBP14784 551 aa15.48■□□□□ 0.07
COL4A6-204ENST00000461897 FLIIQ13045 1269 aa15.48■□□□□ 0.07
COL4A6-204ENST00000461897 L1TD1Q5T7N2 865 aaKnown RBP15.48■□□□□ 0.07
COL4A6-204ENST00000461897 PCDH11XQ9BZA7 1347 aa15.48■□□□□ 0.07
COL4A6-204ENST00000461897 PCDH11YQ9BZA8 1340 aa15.48■□□□□ 0.07
COL4A6-204ENST00000461897 PIP4K2BP78356 416 aa15.48■□□□□ 0.07
COL4A6-204ENST00000461897 BMP2KLQ5H9B9 411 aa15.48■□□□□ 0.07
COL4A6-204ENST00000461897 ZCRB1Q8TBF4 217 aaKnown RBP15.48■□□□□ 0.07
COL4A6-204ENST00000461897 C5P01031 1676 aa15.48■□□□□ 0.07
COL4A6-204ENST00000461897 MCM4P33991 863 aa15.47■□□□□ 0.07
COL4A6-204ENST00000461897 DDIT3P35638 169 aa15.47■□□□□ 0.07
COL4A6-204ENST00000461897 MFAP1P55081 439 aaKnown RBP15.47■□□□□ 0.07
COL4A6-204ENST00000461897 CHD1LQ86WJ1 897 aa15.47■□□□□ 0.07
COL4A6-204ENST00000461897 FAM43AQ8N2R8 423 aa15.47■□□□□ 0.07
COL4A6-204ENST00000461897 NFATC2IPQ8NCF5 419 aa15.47■□□□□ 0.07
COL4A6-204ENST00000461897 GCC1Q96CN9 775 aa15.47■□□□□ 0.07
COL4A6-204ENST00000461897 RTN4Q9NQC3 1192 aaKnown RBP15.47■□□□□ 0.07
COL4A6-204ENST00000461897 F6X3S4 739 aa15.46■□□□□ 0.07
COL4A6-204ENST00000461897 GIGYF1O75420 1035 aaPredicted RBP15.46■□□□□ 0.07
COL4A6-204ENST00000461897 HSP90AB1P08238 724 aaKnown RBP15.46■□□□□ 0.07
COL4A6-204ENST00000461897 C1orf115Q9H7X2 142 aa15.46■□□□□ 0.07
COL4A6-204ENST00000461897 NRAPQ86VF7 1730 aa15.46■□□□□ 0.07
COL4A6-204ENST00000461897 EIF2S2P20042 333 aaKnown RBP15.46■□□□□ 0.06
COL4A6-204ENST00000461897 SLC39A6Q13433 755 aa15.46■□□□□ 0.06
COL4A6-204ENST00000461897 ZNF790Q6PG37 636 aa15.46■□□□□ 0.06
COL4A6-204ENST00000461897 GLI3P10071 1580 aa15.45■□□□□ 0.06
COL4A6-204ENST00000461897 PRAMEF22A3QJZ6 481 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms