RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 PIGBQ92521 554 aa12.69□□□□□ -0.38
C9orf78-203ENST00000461539 MBIPQ9NS73 344 aa12.69□□□□□ -0.38
C9orf78-203ENST00000461539 PARP4Q9UKK3 1724 aaKnown RBP12.68□□□□□ -0.38
C9orf78-203ENST00000461539 FANCIQ9NVI1 1328 aa12.68□□□□□ -0.38
C9orf78-203ENST00000461539 THSD7AQ9UPZ6 1657 aa12.68□□□□□ -0.38
C9orf78-203ENST00000461539 SLC39A6Q13433 755 aa12.68□□□□□ -0.38
C9orf78-203ENST00000461539 TTC5Q8N0Z6 440 aa12.68□□□□□ -0.38
C9orf78-203ENST00000461539 BABAM1Q9NWV8 329 aa12.68□□□□□ -0.38
C9orf78-203ENST00000461539 LRRC37A3O60309 1634 aa12.67□□□□□ -0.38
C9orf78-203ENST00000461539 KCNQ3O43525 872 aa12.67□□□□□ -0.38
C9orf78-203ENST00000461539 DUSP27Q5VZP5 1158 aa12.67□□□□□ -0.38
C9orf78-203ENST00000461539 PKD1L3Q7Z443 1732 aa12.66□□□□□ -0.38
C9orf78-203ENST00000461539 TRMT2AQ8IZ69 625 aaKnown RBP12.66□□□□□ -0.38
C9orf78-203ENST00000461539 BCL9O00512 1426 aa12.65□□□□□ -0.38
C9orf78-203ENST00000461539 EXOSC9Q06265 439 aaKnown RBP12.65□□□□□ -0.38
C9orf78-203ENST00000461539 ZNF790Q6PG37 636 aa12.65□□□□□ -0.38
C9orf78-203ENST00000461539 PTF1AQ7RTS3 328 aa12.65□□□□□ -0.38
C9orf78-203ENST00000461539 ASAP1Q9ULH1 1129 aa12.65□□□□□ -0.38
C9orf78-203ENST00000461539 ELL2O00472 640 aaPredicted RBP12.64□□□□□ -0.39
C9orf78-203ENST00000461539 PTCD1O75127 700 aaKnown RBP12.64□□□□□ -0.39
C9orf78-203ENST00000461539 TRIM37O94972 964 aa12.64□□□□□ -0.39
C9orf78-203ENST00000461539 EIF4A1P60842 406 aaKnown RBP12.64□□□□□ -0.39
C9orf78-203ENST00000461539 BCL11BQ9C0K0 894 aaPredicted RBP12.64□□□□□ -0.39
C9orf78-203ENST00000461539 ATG3Q9NT62 314 aa12.64□□□□□ -0.39
C9orf78-203ENST00000461539 CENPBP07199 599 aaPredicted RBP12.63□□□□□ -0.39
C9orf78-203ENST00000461539 KRT24Q2M2I5 525 aa12.63□□□□□ -0.39
C9orf78-203ENST00000461539 SMARCC1Q92922 1105 aaPredicted RBP12.63□□□□□ -0.39
C9orf78-203ENST00000461539 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
C9orf78-203ENST00000461539 FMNL2Q96PY5 1086 aa12.63□□□□□ -0.39
C9orf78-203ENST00000461539 RBM42Q9BTD8 480 aaKnown RBP12.63□□□□□ -0.39
C9orf78-203ENST00000461539 MRC1P22897 1456 aa12.63□□□□□ -0.39
C9orf78-203ENST00000461539 TSPYL6Q8N831 410 aa12.62□□□□□ -0.39
C9orf78-203ENST00000461539 C8orf58Q8NAV2 365 aa12.62□□□□□ -0.39
C9orf78-203ENST00000461539 TWISTNBQ3B726 338 aaPredicted RBP12.61□□□□□ -0.39
C9orf78-203ENST00000461539 PALLDQ8WX93 1383 aa12.6□□□□□ -0.39
C9orf78-203ENST00000461539 GIGYF1O75420 1035 aaPredicted RBP12.59□□□□□ -0.39
C9orf78-203ENST00000461539 APBA3O96018 575 aa12.59□□□□□ -0.39
C9orf78-203ENST00000461539 SNRPA1P09661 255 aaKnown RBP12.59□□□□□ -0.39
C9orf78-203ENST00000461539 EIF2S2P20042 333 aaKnown RBP12.59□□□□□ -0.39
C9orf78-203ENST00000461539 WNK3Q9BYP7 1800 aa12.59□□□□□ -0.39
C9orf78-203ENST00000461539 LOC102724428A0A0B4J2F2 783 aa12.58□□□□□ -0.4
C9orf78-203ENST00000461539 PRAMEF22A3QJZ6 481 aa12.58□□□□□ -0.4
C9orf78-203ENST00000461539 VAMP4O75379 141 aa12.58□□□□□ -0.4
C9orf78-203ENST00000461539 CT47B1P0C2W7 299 aaPredicted RBP12.58□□□□□ -0.4
C9orf78-203ENST00000461539 SIK1P57059 783 aa12.58□□□□□ -0.4
C9orf78-203ENST00000461539 NECTIN2Q92692 538 aa12.58□□□□□ -0.4
C9orf78-203ENST00000461539 SHANK3Q9BYB0 1731 aa12.58□□□□□ -0.4
C9orf78-203ENST00000461539 ADAMTS7Q9UKP4 1686 aa12.57□□□□□ -0.4
C9orf78-203ENST00000461539 HEG1Q9ULI3 1381 aa12.57□□□□□ -0.4
C9orf78-203ENST00000461539 TCERG1O14776 1098 aaKnown RBP12.57□□□□□ -0.4
C9orf78-203ENST00000461539 HOXB7P09629 217 aa12.57□□□□□ -0.4
C9orf78-203ENST00000461539 ATP6V1AP38606 617 aa12.57□□□□□ -0.4
C9orf78-203ENST00000461539 SF3B2Q13435 895 aaKnown RBP12.57□□□□□ -0.4
C9orf78-203ENST00000461539 HDGFL1Q5TGJ6 251 aa12.57□□□□□ -0.4
C9orf78-203ENST00000461539 DNAJC10Q8IXB1 793 aa12.57□□□□□ -0.4
C9orf78-203ENST00000461539 VSIG10Q8N0Z9 540 aa12.57□□□□□ -0.4
C9orf78-203ENST00000461539 RCAN3Q9UKA8 241 aa12.57□□□□□ -0.4
C9orf78-203ENST00000461539 SOS1Q07889 1333 aaPredicted RBP12.57□□□□□ -0.4
C9orf78-203ENST00000461539 CCDC30Q5VVM6 783 aa12.56□□□□□ -0.4
C9orf78-203ENST00000461539 SLC4A9Q96Q91 983 aa12.56□□□□□ -0.4
C9orf78-203ENST00000461539 TEX13AQ9BXU3 409 aaPredicted RBP12.56□□□□□ -0.4
C9orf78-203ENST00000461539 CHMP4AQ9BY43 222 aa12.56□□□□□ -0.4
C9orf78-203ENST00000461539 CCNL1Q9UK58 526 aaPredicted RBP12.56□□□□□ -0.4
C9orf78-203ENST00000461539 USP16Q9Y5T5 823 aa12.56□□□□□ -0.4
C9orf78-203ENST00000461539 STARD3NLO95772 234 aa12.55□□□□□ -0.4
C9orf78-203ENST00000461539 RARSP54136 660 aaKnown RBP12.55□□□□□ -0.4
C9orf78-203ENST00000461539 KCNQ4P56696 695 aa12.55□□□□□ -0.4
C9orf78-203ENST00000461539 ZNF428Q96B54 188 aa12.55□□□□□ -0.4
C9orf78-203ENST00000461539 BCL2L13Q9BXK5 485 aa12.55□□□□□ -0.4
C9orf78-203ENST00000461539 STK31Q9BXU1 1019 aa12.55□□□□□ -0.4
C9orf78-203ENST00000461539 SMC4Q9NTJ3 1288 aa12.55□□□□□ -0.4
C9orf78-203ENST00000461539 ITPK1Q13572 414 aa12.54□□□□□ -0.4
C9orf78-203ENST00000461539 SSH1Q8WYL5 1049 aa12.54□□□□□ -0.4
C9orf78-203ENST00000461539 TOGARAM1Q9Y4F4 1720 aa12.54□□□□□ -0.4
C9orf78-203ENST00000461539 PLSCR1O15162 318 aa12.53□□□□□ -0.4
C9orf78-203ENST00000461539 TXNRD1Q16881 649 aa12.53□□□□□ -0.4
C9orf78-203ENST00000461539 ALDH1L2Q3SY69 923 aa12.53□□□□□ -0.4
C9orf78-203ENST00000461539 KCPQ6ZWJ8 1503 aa12.52□□□□□ -0.4
C9orf78-203ENST00000461539 BCAR3O75815 825 aa12.52□□□□□ -0.41
C9orf78-203ENST00000461539 A1BGP04217 495 aa12.52□□□□□ -0.41
C9orf78-203ENST00000461539 SLC4A2P04920 1241 aa12.52□□□□□ -0.41
C9orf78-203ENST00000461539 CYP19A1P11511 503 aaPredicted RBP12.52□□□□□ -0.41
C9orf78-203ENST00000461539 BAG6P46379 1132 aa12.52□□□□□ -0.41
C9orf78-203ENST00000461539 PIP4K2AP48426 406 aaPredicted RBP12.52□□□□□ -0.41
C9orf78-203ENST00000461539 SLC27A3Q5K4L6 730 aa12.52□□□□□ -0.41
C9orf78-203ENST00000461539 CHPF2Q9P2E5 772 aa12.52□□□□□ -0.41
C9orf78-203ENST00000461539 DBF4Q9UBU7 674 aaPredicted RBP12.52□□□□□ -0.41
C9orf78-203ENST00000461539 DOT1LQ8TEK3 1739 aa12.51□□□□□ -0.41
C9orf78-203ENST00000461539 ANXA1P04083 346 aa12.51□□□□□ -0.41
C9orf78-203ENST00000461539 EN1Q05925 392 aaPredicted RBP12.51□□□□□ -0.41
C9orf78-203ENST00000461539 ILDR2Q71H61 639 aa12.51□□□□□ -0.41
C9orf78-203ENST00000461539 CCDC125Q86Z20 511 aa12.51□□□□□ -0.41
C9orf78-203ENST00000461539 MRPL50Q8N5N7 158 aaKnown RBP12.51□□□□□ -0.41
C9orf78-203ENST00000461539 LINC00116Q8NCU8 138 aa12.51□□□□□ -0.41
C9orf78-203ENST00000461539 LRRC4BQ9NT99 713 aa12.51□□□□□ -0.41
C9orf78-203ENST00000461539 SCN11AQ9UI33 1791 aa12.51□□□□□ -0.41
C9orf78-203ENST00000461539 DLG5Q8TDM6 1919 aa12.5□□□□□ -0.41
C9orf78-203ENST00000461539 MYL6BP14649 208 aa12.5□□□□□ -0.41
C9orf78-203ENST00000461539 CANXP27824 592 aaKnown RBP12.5□□□□□ -0.41
C9orf78-203ENST00000461539 CRKLP46109 303 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms