RNA–Protein interactions for RNA: ENST00000461283.5

RBM39-221, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 2,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-221	ENST00000461283	NAA30	Q147X3	362 aa	Predicted RBP	4.21	□□□□□ -1.74
RBM39-221	ENST00000461283	ECM1	Q16610	540 aa		4.21	□□□□□ -1.74
RBM39-221	ENST00000461283	TUSC1	Q2TAM9	212 aa		4.21	□□□□□ -1.74
RBM39-221	ENST00000461283	NLGN1	Q8N2Q7	840 aa		4.21	□□□□□ -1.74
RBM39-221	ENST00000461283	TRIM52	Q96A61	297 aa		4.21	□□□□□ -1.74
RBM39-221	ENST00000461283	ACBD3	Q9H3P7	528 aa		4.21	□□□□□ -1.74
RBM39-221	ENST00000461283	PRKAG2	Q9UGJ0	569 aa		4.21	□□□□□ -1.74
RBM39-221	ENST00000461283	WASHC2C	Q9Y4E1	1318 aa		4.2	□□□□□ -1.74
RBM39-221	ENST00000461283	ATP10B	O94823	1461 aa		4.2	□□□□□ -1.74
RBM39-221	ENST00000461283	ERCC3	P19447	782 aa		4.2	□□□□□ -1.74
RBM39-221	ENST00000461283	ELOA	Q14241	798 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-221	ENST00000461283	SAMD9	Q5K651	1589 aa		4.2	□□□□□ -1.74
RBM39-221	ENST00000461283	PRPF38B	Q5VTL8	546 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-221	ENST00000461283	SULF1	Q8IWU6	871 aa		4.2	□□□□□ -1.74
RBM39-221	ENST00000461283	OGFOD1	Q8N543	542 aa		4.2	□□□□□ -1.74
RBM39-221	ENST00000461283	SLC52A1	Q9NWF4	448 aa		4.2	□□□□□ -1.74
RBM39-221	ENST00000461283	FAM196B	A6NMK8	535 aa		4.2	□□□□□ -1.74
RBM39-221	ENST00000461283	P4HB	P07237	508 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-221	ENST00000461283	EIF4G2	P78344	907 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
RBM39-221	ENST00000461283	GTF3C2	Q8WUA4	911 aa	Predicted RBP	4.2	□□□□□ -1.74
RBM39-221	ENST00000461283	CAPN10	Q9HC96	672 aa		4.2	□□□□□ -1.74
RBM39-221	ENST00000461283	ZC3H4	Q9UPT8	1303 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	KDM5C	P41229	1560 aa		4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	SLC10A3	P09131	477 aa		4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	NCL	P19338	710 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	ARHGAP4	P98171	946 aa		4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	FUT2	Q10981	343 aa		4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	SF3A1	Q15459	793 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	ANKMY2	Q8IV38	441 aa		4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	TMEM87A	Q8NBN3	555 aa		4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	CLP1	Q92989	425 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	TMEM134	Q9H6X4	195 aa		4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	PCDHGB7	Q9Y5F8	929 aa		4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	ZNF518A	Q6AHZ1	1483 aa		4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	SYNM	O15061	1565 aa		4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	MLH3	Q9UHC1	1453 aa		4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	LARP1	Q6PKG0	1096 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	SLF2	Q8IX21	1173 aa		4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	ZSWIM4	Q9H7M6	989 aa		4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	DMGDH	Q9UI17	866 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	WWC3	Q9ULE0	1092 aa		4.19	□□□□□ -1.74
RBM39-221	ENST00000461283	HECW1	Q76N89	1606 aa		4.18	□□□□□ -1.74
RBM39-221	ENST00000461283	MYO5C	Q9NQX4	1742 aa		4.18	□□□□□ -1.74
RBM39-221	ENST00000461283	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	4.18	□□□□□ -1.74
RBM39-221	ENST00000461283	PEX14	O75381	377 aa		4.18	□□□□□ -1.74
RBM39-221	ENST00000461283	POTEJ	P0CG39	1038 aa		4.18	□□□□□ -1.74
RBM39-221	ENST00000461283	OCLN	Q16625	522 aa		4.18	□□□□□ -1.74
RBM39-221	ENST00000461283	EAPP	Q56P03	285 aa	Predicted RBP	4.18	□□□□□ -1.74
RBM39-221	ENST00000461283	METTL16	Q86W50	562 aa	Known RBP	4.18	□□□□□ -1.74
RBM39-221	ENST00000461283	SPACA7	Q96KW9	195 aa		4.18	□□□□□ -1.74
RBM39-221	ENST00000461283	PNMA3	Q9UL41	463 aa		4.18	□□□□□ -1.74
RBM39-221	ENST00000461283	C3	P01024	1663 aa		4.18	□□□□□ -1.74
RBM39-221	ENST00000461283	SFI1	A8K8P3	1242 aa		4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	CCER2	I3L3R5	266 aa		4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	NUDT7	P0C024	238 aa		4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	IPO9	Q96P70	1041 aa	Known RBP	4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	TINF2	Q9BSI4	451 aa		4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	PRDM16	Q9HAZ2	1276 aa		4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	PPME1	Q9Y570	386 aa		4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	PLCH2	O75038	1416 aa		4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	MAPK8	P45983	427 aa		4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	MRPL58	Q14197	206 aa	Known RBP	4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	BMS1	Q14692	1282 aa	Known RBP	4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	TCEAL1	Q15170	157 aa		4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	PROX2	Q3B8N5	592 aa		4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	LARGE2	Q8N3Y3	721 aa		4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	ZDHHC16	Q969W1	377 aa		4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	PSMD1	Q99460	953 aa		4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	PPP4R2	Q9NY27	417 aa		4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	PCDHGA4	Q9Y5G9	962 aa		4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	DEPDC5	O75140	1603 aa		4.17	□□□□□ -1.74
RBM39-221	ENST00000461283	PLEKHD1	A6NEE1	506 aa		4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	POTEB2	H3BUK9	544 aa		4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	ICMT	O60725	284 aa		4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	CANX	P27824	592 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	SOX11	P35716	441 aa		4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	GCGR	P47871	477 aa		4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	PUS10	Q3MIT2	529 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	ZNF394	Q53GI3	561 aa		4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	ASB16	Q96NS5	453 aa		4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	MAP10	Q9P2G4	905 aa		4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	RBM27	Q9P2N5	1060 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	MRPL42	Q9Y6G3	142 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	TCOF1	Q13428	1488 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	LOC102724159	A0A0B4J2E5	919 aa		4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	PARN	O95453	639 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	VAMP1	P23763	118 aa		4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	DNAJB2	P25686	324 aa		4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	GJA5	P36382	358 aa		4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	DDX10	Q13206	875 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	PWP2	Q15269	919 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	TMC7	Q7Z402	723 aa		4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	POLR1A	O95602	1720 aa	Predicted RBP	4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	SUPT6H	Q7KZ85	1726 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-221	ENST00000461283	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	4.15	□□□□□ -1.74
RBM39-221	ENST00000461283	EEA1	Q15075	1411 aa		4.15	□□□□□ -1.74
RBM39-221	ENST00000461283	SCAMP3	O14828	347 aa	Known RBP	4.15	□□□□□ -1.74
RBM39-221	ENST00000461283	MAP4K4	O95819	1239 aa	Predicted RBP	4.15	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms