RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 ADRA2BP18089 450 aa20.16■□□□□ 0.82
DNMT3A-207ENST00000461228 LINC00116Q8NCU8 138 aa20.16■□□□□ 0.82
DNMT3A-207ENST00000461228 TJP1Q07157 1748 aa20.16■□□□□ 0.82
DNMT3A-207ENST00000461228 POLKQ9UBT6 870 aa20.15■□□□□ 0.82
DNMT3A-207ENST00000461228 N4BP2Q86UW6 1770 aaPredicted RBP20.15■□□□□ 0.82
DNMT3A-207ENST00000461228 MYH14Q7Z406 1995 aaKnown RBP20.15■□□□□ 0.82
DNMT3A-207ENST00000461228 CNTNAP4Q9C0A0 1308 aa20.14■□□□□ 0.81
DNMT3A-207ENST00000461228 GPBP1L1Q9HC44 474 aaPredicted RBP20.14■□□□□ 0.81
DNMT3A-207ENST00000461228 ADAMTS7Q9UKP4 1686 aa20.13■□□□□ 0.81
DNMT3A-207ENST00000461228 KDM6AO15550 1401 aaPredicted RBP20.13■□□□□ 0.81
DNMT3A-207ENST00000461228 HSP90AB1P08238 724 aaKnown RBP20.13■□□□□ 0.81
DNMT3A-207ENST00000461228 VIRMAQ69YN4 1812 aaKnown RBP20.13■□□□□ 0.81
DNMT3A-207ENST00000461228 MRC1P22897 1456 aa20.12■□□□□ 0.81
DNMT3A-207ENST00000461228 ERVV-2B6SEH9 535 aa20.12■□□□□ 0.81
DNMT3A-207ENST00000461228 GNPATO15228 680 aa20.11■□□□□ 0.81
DNMT3A-207ENST00000461228 PHF14O94880 888 aa20.11■□□□□ 0.81
DNMT3A-207ENST00000461228 ITPK1Q13572 414 aa20.11■□□□□ 0.81
DNMT3A-207ENST00000461228 TRIM26Q12899 539 aaPredicted RBP20.1■□□□□ 0.81
DNMT3A-207ENST00000461228 EIF4A2Q14240 407 aaKnown RBP20.1■□□□□ 0.81
DNMT3A-207ENST00000461228 RC3H1Q5TC82 1133 aaKnown RBP20.1■□□□□ 0.81
DNMT3A-207ENST00000461228 DCAF5Q96JK2 942 aa20.1■□□□□ 0.81
DNMT3A-207ENST00000461228 ASAP1Q9ULH1 1129 aa20.1■□□□□ 0.81
DNMT3A-207ENST00000461228 ATP6V1AP38606 617 aa20.09■□□□□ 0.81
DNMT3A-207ENST00000461228 TGFB2P61812 414 aa20.09■□□□□ 0.81
DNMT3A-207ENST00000461228 ATG3Q9NT62 314 aa20.09■□□□□ 0.81
DNMT3A-207ENST00000461228 DLEC1Q9Y238 1755 aa20.08■□□□□ 0.81
DNMT3A-207ENST00000461228 TNRC6CQ9HCJ0 1690 aaKnown RBP20.07■□□□□ 0.8
DNMT3A-207ENST00000461228 PPM1GO15355 546 aaPredicted RBP20.07■□□□□ 0.8
DNMT3A-207ENST00000461228 HSPA6P17066 643 aa20.07■□□□□ 0.8
DNMT3A-207ENST00000461228 AMOTQ4VCS5 1084 aa20.07■□□□□ 0.8
DNMT3A-207ENST00000461228 NLGN1Q8N2Q7 840 aa20.07■□□□□ 0.8
DNMT3A-207ENST00000461228 MMP10P09238 476 aa20.06■□□□□ 0.8
DNMT3A-207ENST00000461228 NRXN2Q9P2S2 1712 aa20.06■□□□□ 0.8
DNMT3A-207ENST00000461228 RTCBQ9Y3I0 505 aaKnown RBP20.06■□□□□ 0.8
DNMT3A-207ENST00000461228 UBR2Q8IWV8 1755 aa20.06■□□□□ 0.8
DNMT3A-207ENST00000461228 WDR90Q96KV7 1748 aa20.03■□□□□ 0.8
DNMT3A-207ENST00000461228 IFFO2Q5TF58 517 aa20.03■□□□□ 0.8
DNMT3A-207ENST00000461228 TRAPPC3LQ5T215 181 aa20.02■□□□□ 0.8
DNMT3A-207ENST00000461228 SLC4A9Q96Q91 983 aa20.02■□□□□ 0.8
DNMT3A-207ENST00000461228 KIF3CO14782 793 aa20.01■□□□□ 0.79
DNMT3A-207ENST00000461228 RPS6KA4O75676 772 aa20.01■□□□□ 0.79
DNMT3A-207ENST00000461228 PLEKHO1Q53GL0 409 aaPredicted RBP20.01■□□□□ 0.79
DNMT3A-207ENST00000461228 CCDC87Q9NVE4 849 aa20.01■□□□□ 0.79
DNMT3A-207ENST00000461228 GYS1P13807 737 aa20■□□□□ 0.79
DNMT3A-207ENST00000461228 SBF1O95248 1867 aa20■□□□□ 0.79
DNMT3A-207ENST00000461228 AFDNP55196 1824 aaKnown RBP19.98■□□□□ 0.79
DNMT3A-207ENST00000461228 USP42Q9H9J4 1324 aaKnown RBP19.98■□□□□ 0.79
DNMT3A-207ENST00000461228 SCN7AQ01118 1682 aa19.97■□□□□ 0.79
DNMT3A-207ENST00000461228 EIF4G2P78344 907 aaKnown RBP eCLIP19.97■□□□□ 0.79
DNMT3A-207ENST00000461228 ZNF530Q6P9A1 599 aaPredicted RBP19.97■□□□□ 0.79
DNMT3A-207ENST00000461228 ARHGEF1Q92888 912 aaKnown RBP19.97■□□□□ 0.79
DNMT3A-207ENST00000461228 KCPQ6ZWJ8 1503 aa19.97■□□□□ 0.79
DNMT3A-207ENST00000461228 RFC4P35249 363 aa19.96■□□□□ 0.79
DNMT3A-207ENST00000461228 SMIM5Q71RC9 77 aa19.96■□□□□ 0.79
DNMT3A-207ENST00000461228 ZC3H4Q9UPT8 1303 aaKnown RBP19.96■□□□□ 0.79
DNMT3A-207ENST00000461228 CABP4P57796 275 aa19.95■□□□□ 0.78
DNMT3A-207ENST00000461228 C1orf141Q5JVX7 400 aa19.95■□□□□ 0.78
DNMT3A-207ENST00000461228 PARP3Q9Y6F1 533 aa19.95■□□□□ 0.78
DNMT3A-207ENST00000461228 TIAM2Q8IVF5 1701 aa19.94■□□□□ 0.78
DNMT3A-207ENST00000461228 SIPA1L3O60292 1781 aaPredicted RBP19.94■□□□□ 0.78
DNMT3A-207ENST00000461228 TOMM70O94826 608 aa19.94■□□□□ 0.78
DNMT3A-207ENST00000461228 APLP1P51693 650 aa19.94■□□□□ 0.78
DNMT3A-207ENST00000461228 ZNF526Q8TF50 670 aaPredicted RBP19.93■□□□□ 0.78
DNMT3A-207ENST00000461228 RBM42Q9BTD8 480 aaKnown RBP19.93■□□□□ 0.78
DNMT3A-207ENST00000461228 CRKLP46109 303 aaKnown RBP19.92■□□□□ 0.78
DNMT3A-207ENST00000461228 MTHFSP49914 203 aa19.92■□□□□ 0.78
DNMT3A-207ENST00000461228 BCS1LQ9Y276 419 aa19.92■□□□□ 0.78
DNMT3A-207ENST00000461228 TNNT2P45379 298 aaPredicted RBP19.91■□□□□ 0.78
DNMT3A-207ENST00000461228 PANK3Q9H999 370 aa19.91■□□□□ 0.78
DNMT3A-207ENST00000461228 DPEP1P16444 411 aa19.9■□□□□ 0.78
DNMT3A-207ENST00000461228 KCNA3P22001 575 aa19.89■□□□□ 0.77
DNMT3A-207ENST00000461228 IL13P35225 146 aa19.89■□□□□ 0.77
DNMT3A-207ENST00000461228 AKAP4Q5JQC9 854 aa19.89■□□□□ 0.77
DNMT3A-207ENST00000461228 AEBP1Q8IUX7 1158 aa19.89■□□□□ 0.77
DNMT3A-207ENST00000461228 RBM46Q8TBY0 533 aaKnown RBP19.89■□□□□ 0.77
DNMT3A-207ENST00000461228 PIM2Q9P1W9 311 aa19.89■□□□□ 0.77
DNMT3A-207ENST00000461228 PCNTO95613 3336 aa19.89■□□□□ 0.77
DNMT3A-207ENST00000461228 ARFGEF2Q9Y6D5 1785 aa19.88■□□□□ 0.77
DNMT3A-207ENST00000461228 SOS1Q07889 1333 aaPredicted RBP19.88■□□□□ 0.77
DNMT3A-207ENST00000461228 A0A0G2JLW4 131 aa19.88■□□□□ 0.77
DNMT3A-207ENST00000461228 HSPA5P11021 654 aaKnown RBP19.88■□□□□ 0.77
DNMT3A-207ENST00000461228 MORC1Q86VD1 984 aa19.88■□□□□ 0.77
DNMT3A-207ENST00000461228 COL15A1P39059 1388 aa19.87■□□□□ 0.77
DNMT3A-207ENST00000461228 FCHSD2O94868 740 aa19.87■□□□□ 0.77
DNMT3A-207ENST00000461228 DDR1Q08345 913 aa19.87■□□□□ 0.77
DNMT3A-207ENST00000461228 SLC52A2Q9HAB3 445 aa19.87■□□□□ 0.77
DNMT3A-207ENST00000461228 BCORQ6W2J9 1755 aa19.87■□□□□ 0.77
DNMT3A-207ENST00000461228 DICER1Q9UPY3 1922 aaKnown RBP19.86■□□□□ 0.77
DNMT3A-207ENST00000461228 KDM2BQ8NHM5 1336 aa19.86■□□□□ 0.77
DNMT3A-207ENST00000461228 POLRMTO00411 1230 aaKnown RBP19.86■□□□□ 0.77
DNMT3A-207ENST00000461228 SULT6B1Q6IMI4 303 aa19.86■□□□□ 0.77
DNMT3A-207ENST00000461228 VSIG10Q8N0Z9 540 aa19.86■□□□□ 0.77
DNMT3A-207ENST00000461228 NFATC2IPQ8NCF5 419 aa19.86■□□□□ 0.77
DNMT3A-207ENST00000461228 WWC3Q9ULE0 1092 aa19.86■□□□□ 0.77
DNMT3A-207ENST00000461228 COL3A1P02461 1466 aaPredicted RBP19.86■□□□□ 0.77
DNMT3A-207ENST00000461228 NPC1L1Q9UHC9 1359 aa19.85■□□□□ 0.77
DNMT3A-207ENST00000461228 PTCD1O75127 700 aaKnown RBP19.85■□□□□ 0.77
DNMT3A-207ENST00000461228 FSTL1Q12841 308 aa19.85■□□□□ 0.77
DNMT3A-207ENST00000461228 DALRD3Q5D0E6 543 aaKnown RBP19.85■□□□□ 0.77
DNMT3A-207ENST00000461228 AMER1Q5JTC6 1135 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms