RNA–Protein interactions for RNA: ENST00000460945.5

APTX-210, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-210ENST00000460945 LINC00116Q8NCU8 138 aa22.34■■□□□ 1.17
APTX-210ENST00000460945 CABP4P57796 275 aa22.33■■□□□ 1.17
APTX-210ENST00000460945 ITPK1Q13572 414 aa22.33■■□□□ 1.17
APTX-210ENST00000460945 SYT17Q9BSW7 474 aa22.33■■□□□ 1.17
APTX-210ENST00000460945 ATP6V1AP38606 617 aa22.32■■□□□ 1.16
APTX-210ENST00000460945 AK7Q96M32 723 aa22.31■■□□□ 1.16
APTX-210ENST00000460945 SLC4A9Q96Q91 983 aa22.31■■□□□ 1.16
APTX-210ENST00000460945 ZNF831Q5JPB2 1677 aa22.3■■□□□ 1.16
APTX-210ENST00000460945 AKAP4Q5JQC9 854 aa22.3■■□□□ 1.16
APTX-210ENST00000460945 MSL1Q68DK7 614 aa22.3■■□□□ 1.16
APTX-210ENST00000460945 NFATC2IPQ8NCF5 419 aa22.3■■□□□ 1.16
APTX-210ENST00000460945 COL5A3P25940 1745 aaPredicted RBP22.29■■□□□ 1.16
APTX-210ENST00000460945 U2SURPO15042 1029 aaKnown RBP22.29■■□□□ 1.16
APTX-210ENST00000460945 PHF14O94880 888 aa22.29■■□□□ 1.16
APTX-210ENST00000460945 HMGB2P26583 209 aaKnown RBP22.29■■□□□ 1.16
APTX-210ENST00000460945 POLD1P28340 1107 aa22.29■■□□□ 1.16
APTX-210ENST00000460945 MTHFSDQ2M296 383 aaKnown RBP22.29■■□□□ 1.16
APTX-210ENST00000460945 RBM42Q9BTD8 480 aaKnown RBP22.29■■□□□ 1.16
APTX-210ENST00000460945 LGR6Q9HBX8 967 aa22.28■■□□□ 1.16
APTX-210ENST00000460945 MYH14Q7Z406 1995 aaKnown RBP22.27■■□□□ 1.16
APTX-210ENST00000460945 PPP2R1AP30153 589 aa22.27■■□□□ 1.16
APTX-210ENST00000460945 KLHL34Q8N239 644 aa22.27■■□□□ 1.16
APTX-210ENST00000460945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.26■■□□□ 1.15
APTX-210ENST00000460945 FLAD1Q8NFF5 587 aa22.26■■□□□ 1.15
APTX-210ENST00000460945 ADAMTS7Q9UKP4 1686 aa22.25■■□□□ 1.15
APTX-210ENST00000460945 TJP1Q07157 1748 aa22.24■■□□□ 1.15
APTX-210ENST00000460945 DCAF8L1A6NGE4 600 aa22.24■■□□□ 1.15
APTX-210ENST00000460945 GNPATO15228 680 aa22.24■■□□□ 1.15
APTX-210ENST00000460945 RNMTO43148 476 aaKnown RBP22.24■■□□□ 1.15
APTX-210ENST00000460945 MAP3K5Q99683 1374 aa22.24■■□□□ 1.15
APTX-210ENST00000460945 UTRNP46939 3433 aa22.23■■□□□ 1.15
APTX-210ENST00000460945 PTCD1O75127 700 aaKnown RBP22.23■■□□□ 1.15
APTX-210ENST00000460945 CFAP53Q96M91 514 aa22.23■■□□□ 1.15
APTX-210ENST00000460945 SLC52A2Q9HAB3 445 aa22.23■■□□□ 1.15
APTX-210ENST00000460945 SSFA2P28290 1259 aa22.22■■□□□ 1.15
APTX-210ENST00000460945 MRC1P22897 1456 aa22.22■■□□□ 1.15
APTX-210ENST00000460945 GOLGB1Q14789 3259 aaKnown RBP22.19■■□□□ 1.14
APTX-210ENST00000460945 SLC39A6Q13433 755 aa22.19■■□□□ 1.14
APTX-210ENST00000460945 NLGN2Q8NFZ4 835 aa22.19■■□□□ 1.14
APTX-210ENST00000460945 CICQ96RK0 1608 aaPredicted RBP22.18■■□□□ 1.14
APTX-210ENST00000460945 PHACTR3Q96KR7 559 aa22.18■■□□□ 1.14
APTX-210ENST00000460945 RSPH6AQ9H0K4 717 aa22.18■■□□□ 1.14
APTX-210ENST00000460945 SIPA1L3O60292 1781 aaPredicted RBP22.17■■□□□ 1.14
APTX-210ENST00000460945 C4AP0C0L4 1744 aa22.17■■□□□ 1.14
APTX-210ENST00000460945 PRKAR2BP31323 418 aa22.17■■□□□ 1.14
APTX-210ENST00000460945 RC3H1Q5TC82 1133 aaKnown RBP22.17■■□□□ 1.14
APTX-210ENST00000460945 NUDCQ9Y266 331 aa22.17■■□□□ 1.14
APTX-210ENST00000460945 RTCBQ9Y3I0 505 aaKnown RBP22.17■■□□□ 1.14
APTX-210ENST00000460945 CHD4Q14839 1912 aa22.16■■□□□ 1.14
APTX-210ENST00000460945 CNTNAP4Q9C0A0 1308 aa22.16■■□□□ 1.14
APTX-210ENST00000460945 U2AF1L5P0DN76 240 aaPredicted RBP22.16■■□□□ 1.14
APTX-210ENST00000460945 U2AF1Q01081 240 aaKnown RBP eCLIP22.16■■□□□ 1.14
APTX-210ENST00000460945 GAS2L2Q8NHY3 880 aa22.16■■□□□ 1.14
APTX-210ENST00000460945 UBR2Q8IWV8 1755 aa22.15■■□□□ 1.14
APTX-210ENST00000460945 KCPQ6ZWJ8 1503 aa22.15■■□□□ 1.14
APTX-210ENST00000460945 GNAT3A8MTJ3 354 aa22.14■■□□□ 1.13
APTX-210ENST00000460945 RPS6KA4O75676 772 aa22.14■■□□□ 1.13
APTX-210ENST00000460945 YY1P25490 414 aa22.14■■□□□ 1.13
APTX-210ENST00000460945 TRAPPC3LQ5T215 181 aa22.14■■□□□ 1.13
APTX-210ENST00000460945 IL17REQ8NFR9 667 aa22.14■■□□□ 1.13
APTX-210ENST00000460945 CRKLP46109 303 aaKnown RBP22.13■■□□□ 1.13
APTX-210ENST00000460945 DNAJC10Q8IXB1 793 aa22.13■■□□□ 1.13
APTX-210ENST00000460945 ARHGEF1Q92888 912 aaKnown RBP22.13■■□□□ 1.13
APTX-210ENST00000460945 DDX10Q13206 875 aaKnown RBP22.11■■□□□ 1.13
APTX-210ENST00000460945 GPR162Q16538 588 aa22.11■■□□□ 1.13
APTX-210ENST00000460945 PELP1Q8IZL8 1130 aaKnown RBP22.11■■□□□ 1.13
APTX-210ENST00000460945 DLG5Q8TDM6 1919 aa22.1■■□□□ 1.13
APTX-210ENST00000460945 ADRA2BP18089 450 aa22.1■■□□□ 1.13
APTX-210ENST00000460945 INTS5Q6P9B9 1019 aaKnown RBP22.1■■□□□ 1.13
APTX-210ENST00000460945 FCHSD2O94868 740 aa22.09■■□□□ 1.13
APTX-210ENST00000460945 RFC4P35249 363 aa22.09■■□□□ 1.13
APTX-210ENST00000460945 CD2APQ9Y5K6 639 aa22.09■■□□□ 1.13
APTX-210ENST00000460945 TEFQ10587 303 aa22.08■■□□□ 1.13
APTX-210ENST00000460945 MMP10P09238 476 aa22.07■■□□□ 1.12
APTX-210ENST00000460945 CYP19A1P11511 503 aaPredicted RBP22.07■■□□□ 1.12
APTX-210ENST00000460945 GYS1P13807 737 aa22.07■■□□□ 1.12
APTX-210ENST00000460945 CEMIPQ8WUJ3 1361 aa22.07■■□□□ 1.12
APTX-210ENST00000460945 CCDC87Q9NVE4 849 aa22.06■■□□□ 1.12
APTX-210ENST00000460945 SRP68Q9UHB9 627 aaKnown RBP22.06■■□□□ 1.12
APTX-210ENST00000460945 YBX3P16989 372 aaKnown RBP eCLIP22.05■■□□□ 1.12
APTX-210ENST00000460945 TTC5Q8N0Z6 440 aa22.05■■□□□ 1.12
APTX-210ENST00000460945 KIF13BQ9NQT8 1826 aa22.05■■□□□ 1.12
APTX-210ENST00000460945 VSIG10Q8N0Z9 540 aa22.04■■□□□ 1.12
APTX-210ENST00000460945 NLGN1Q8N2Q7 840 aa22.04■■□□□ 1.12
APTX-210ENST00000460945 N4BP2Q86UW6 1770 aaPredicted RBP22.04■■□□□ 1.12
APTX-210ENST00000460945 KCNQ3O43525 872 aa22.03■■□□□ 1.12
APTX-210ENST00000460945 ZNF790Q6PG37 636 aa22.03■■□□□ 1.12
APTX-210ENST00000460945 MCM10Q7L590 875 aa22.03■■□□□ 1.12
APTX-210ENST00000460945 ZNF496Q96IT1 587 aaPredicted RBP22.03■■□□□ 1.12
APTX-210ENST00000460945 SOS1Q07889 1333 aaPredicted RBP22.03■■□□□ 1.12
APTX-210ENST00000460945 DCTN1Q14203 1278 aa22.02■■□□□ 1.12
APTX-210ENST00000460945 ZBTB1Q9Y2K1 713 aa22.02■■□□□ 1.12
APTX-210ENST00000460945 KIAA1551Q9HCM1 1747 aa22.02■■□□□ 1.12
APTX-210ENST00000460945 USP42Q9H9J4 1324 aaKnown RBP22.02■■□□□ 1.12
APTX-210ENST00000460945 FKBP8Q14318 412 aa22.01■■□□□ 1.11
APTX-210ENST00000460945 RALBP1Q15311 655 aa22.01■■□□□ 1.11
APTX-210ENST00000460945 WWC3Q9ULE0 1092 aa22.01■■□□□ 1.11
APTX-210ENST00000460945 HEG1Q9ULI3 1381 aa22■■□□□ 1.11
APTX-210ENST00000460945 BTBD11A6QL63 1104 aa22■■□□□ 1.11
APTX-210ENST00000460945 RTF1Q92541 710 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms