RNA–Protein interactions for RNA: ENST00000458645.5

LINC01006-207, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 4 BASIC

Gene LINC01006, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-207ENST00000458645 RAPGEF4Q8WZA2 1011 aa10.61□□□□□ -0.71
LINC01006-207ENST00000458645 CARD11Q9BXL7 1154 aa10.61□□□□□ -0.71
LINC01006-207ENST00000458645 GGNBP2Q9H3C7 697 aa10.61□□□□□ -0.71
LINC01006-207ENST00000458645 ASAP1Q9ULH1 1129 aa10.61□□□□□ -0.71
LINC01006-207ENST00000458645 KCPQ6ZWJ8 1503 aa10.61□□□□□ -0.71
LINC01006-207ENST00000458645 PKD1L3Q7Z443 1732 aa10.61□□□□□ -0.71
LINC01006-207ENST00000458645 NSD3Q9BZ95 1437 aa10.6□□□□□ -0.71
LINC01006-207ENST00000458645 LOC102724428A0A0B4J2F2 783 aa10.6□□□□□ -0.71
LINC01006-207ENST00000458645 GNPATO15228 680 aa10.6□□□□□ -0.71
LINC01006-207ENST00000458645 SLC4A2P04920 1241 aa10.6□□□□□ -0.71
LINC01006-207ENST00000458645 KCNA3P22001 575 aa10.6□□□□□ -0.71
LINC01006-207ENST00000458645 SIK1P57059 783 aa10.6□□□□□ -0.71
LINC01006-207ENST00000458645 ARHGAP27Q6ZUM4 889 aa10.6□□□□□ -0.71
LINC01006-207ENST00000458645 SLC4A9Q96Q91 983 aa10.6□□□□□ -0.71
LINC01006-207ENST00000458645 TESK2Q96S53 571 aa10.6□□□□□ -0.71
LINC01006-207ENST00000458645 PCNTO95613 3336 aa10.6□□□□□ -0.71
LINC01006-207ENST00000458645 CGNL1Q0VF96 1302 aa10.59□□□□□ -0.71
LINC01006-207ENST00000458645 FYB1O15117 783 aa10.59□□□□□ -0.71
LINC01006-207ENST00000458645 C9orf131Q5VYM1 1079 aa10.59□□□□□ -0.71
LINC01006-207ENST00000458645 TNS4Q8IZW8 715 aa10.59□□□□□ -0.71
LINC01006-207ENST00000458645 RBM46Q8TBY0 533 aaKnown RBP10.59□□□□□ -0.71
LINC01006-207ENST00000458645 BRCA1P38398 1863 aaKnown RBP10.58□□□□□ -0.72
LINC01006-207ENST00000458645 INSRP06213 1382 aa10.58□□□□□ -0.72
LINC01006-207ENST00000458645 PRELPP51888 382 aa10.58□□□□□ -0.72
LINC01006-207ENST00000458645 NCAPD2Q15021 1401 aa10.58□□□□□ -0.72
LINC01006-207ENST00000458645 KDRP35968 1356 aa10.57□□□□□ -0.72
LINC01006-207ENST00000458645 FCHSD2O94868 740 aa10.57□□□□□ -0.72
LINC01006-207ENST00000458645 NKX1-1Q15270 411 aaPredicted RBP10.57□□□□□ -0.72
LINC01006-207ENST00000458645 SMARCC1Q92922 1105 aaPredicted RBP10.57□□□□□ -0.72
LINC01006-207ENST00000458645 ATG3Q9NT62 314 aa10.57□□□□□ -0.72
LINC01006-207ENST00000458645 EMILIN1Q9Y6C2 1016 aa10.57□□□□□ -0.72
LINC01006-207ENST00000458645 C4AP0C0L4 1744 aa10.57□□□□□ -0.72
LINC01006-207ENST00000458645 GYS1P13807 737 aa10.56□□□□□ -0.72
LINC01006-207ENST00000458645 ATP6V1AP38606 617 aa10.56□□□□□ -0.72
LINC01006-207ENST00000458645 TGFB2P61812 414 aa10.56□□□□□ -0.72
LINC01006-207ENST00000458645 RRAGCQ9HB90 399 aa10.56□□□□□ -0.72
LINC01006-207ENST00000458645 SMG6Q86US8 1419 aaKnown RBP10.56□□□□□ -0.72
LINC01006-207ENST00000458645 ATXN8OSP0DMR3 200 aa10.55□□□□□ -0.72
LINC01006-207ENST00000458645 POTEHQ6S545 545 aa10.55□□□□□ -0.72
LINC01006-207ENST00000458645 ARHGEF1Q92888 912 aaKnown RBP10.55□□□□□ -0.72
LINC01006-207ENST00000458645 PUS7Q96PZ0 661 aaKnown RBP10.55□□□□□ -0.72
LINC01006-207ENST00000458645 FLT4P35916 1363 aa10.54□□□□□ -0.72
LINC01006-207ENST00000458645 ST20-MTHFSA0A0A6YYL1 179 aa10.54□□□□□ -0.72
LINC01006-207ENST00000458645 HSPA1AP0DMV8 641 aaKnown RBP10.54□□□□□ -0.72
LINC01006-207ENST00000458645 HSPA1BP0DMV9 641 aaKnown RBP10.54□□□□□ -0.72
LINC01006-207ENST00000458645 CHRNA5P30532 468 aa10.54□□□□□ -0.72
LINC01006-207ENST00000458645 FSTL1Q12841 308 aa10.54□□□□□ -0.72
LINC01006-207ENST00000458645 PHKG2P15735 406 aa10.53□□□□□ -0.72
LINC01006-207ENST00000458645 TMF1P82094 1093 aa10.53□□□□□ -0.72
LINC01006-207ENST00000458645 RASSF7Q02833 373 aa10.53□□□□□ -0.72
LINC01006-207ENST00000458645 DDR1Q08345 913 aa10.53□□□□□ -0.72
LINC01006-207ENST00000458645 DCAF5Q96JK2 942 aa10.53□□□□□ -0.72
LINC01006-207ENST00000458645 TMOD3Q9NYL9 352 aa10.53□□□□□ -0.72
LINC01006-207ENST00000458645 RNF181Q9P0P0 153 aa10.53□□□□□ -0.72
LINC01006-207ENST00000458645 COL5A3P25940 1745 aaPredicted RBP10.53□□□□□ -0.72
LINC01006-207ENST00000458645 ARFGEF1Q9Y6D6 1849 aa10.52□□□□□ -0.73
LINC01006-207ENST00000458645 TRAPPC3LQ5T215 181 aa10.52□□□□□ -0.73
LINC01006-207ENST00000458645 C16orf71Q8IYS4 520 aaPredicted RBP10.52□□□□□ -0.73
LINC01006-207ENST00000458645 EYA1Q99502 592 aa10.52□□□□□ -0.73
LINC01006-207ENST00000458645 CCDC87Q9NVE4 849 aa10.52□□□□□ -0.73
LINC01006-207ENST00000458645 SRP68Q9UHB9 627 aaKnown RBP10.52□□□□□ -0.73
LINC01006-207ENST00000458645 PLEKHG2Q9H7P9 1386 aa10.52□□□□□ -0.73
LINC01006-207ENST00000458645 KIF20BQ96Q89 1820 aa10.51□□□□□ -0.73
LINC01006-207ENST00000458645 NLGN1Q8N2Q7 840 aa10.51□□□□□ -0.73
LINC01006-207ENST00000458645 CARD14Q9BXL6 1004 aa10.51□□□□□ -0.73
LINC01006-207ENST00000458645 RTCBQ9Y3I0 505 aaKnown RBP10.51□□□□□ -0.73
LINC01006-207ENST00000458645 TNRC6CQ9HCJ0 1690 aaKnown RBP10.5□□□□□ -0.73
LINC01006-207ENST00000458645 RBM42Q9BTD8 480 aaKnown RBP10.5□□□□□ -0.73
LINC01006-207ENST00000458645 PIM2Q9P1W9 311 aa10.5□□□□□ -0.73
LINC01006-207ENST00000458645 ADAMTS7Q9UKP4 1686 aa10.5□□□□□ -0.73
LINC01006-207ENST00000458645 TONSLQ96HA7 1378 aa10.5□□□□□ -0.73
LINC01006-207ENST00000458645 ANKRD26Q9UPS8 1709 aa10.5□□□□□ -0.73
LINC01006-207ENST00000458645 POTECB2RU33 542 aa10.49□□□□□ -0.73
LINC01006-207ENST00000458645 PPM1GO15355 546 aaPredicted RBP10.49□□□□□ -0.73
LINC01006-207ENST00000458645 RPS6KA4O75676 772 aa10.49□□□□□ -0.73
LINC01006-207ENST00000458645 SPG7Q9UQ90 795 aa10.49□□□□□ -0.73
LINC01006-207ENST00000458645 PARP3Q9Y6F1 533 aa10.49□□□□□ -0.73
LINC01006-207ENST00000458645 KDM2BQ8NHM5 1336 aa10.49□□□□□ -0.73
LINC01006-207ENST00000458645 CNTNAP4Q9C0A0 1308 aa10.49□□□□□ -0.73
LINC01006-207ENST00000458645 KIF24Q5T7B8 1368 aa10.49□□□□□ -0.73
LINC01006-207ENST00000458645 KDM6AO15550 1401 aaPredicted RBP10.49□□□□□ -0.73
LINC01006-207ENST00000458645 MYH14Q7Z406 1995 aaKnown RBP10.48□□□□□ -0.73
LINC01006-207ENST00000458645 ZNF831Q5JPB2 1677 aa10.48□□□□□ -0.73
LINC01006-207ENST00000458645 MYCNP04198 464 aaPredicted RBP10.48□□□□□ -0.73
LINC01006-207ENST00000458645 RFC4P35249 363 aa10.48□□□□□ -0.73
LINC01006-207ENST00000458645 DALRD3Q5D0E6 543 aaKnown RBP10.48□□□□□ -0.73
LINC01006-207ENST00000458645 IFNL2Q8IZJ0 200 aa10.48□□□□□ -0.73
LINC01006-207ENST00000458645 SMC1BQ8NDV3 1235 aa10.48□□□□□ -0.73
LINC01006-207ENST00000458645 SBF1O95248 1867 aa10.48□□□□□ -0.73
LINC01006-207ENST00000458645 TJP1Q07157 1748 aa10.47□□□□□ -0.73
LINC01006-207ENST00000458645 RC3H1Q5TC82 1133 aaKnown RBP10.47□□□□□ -0.73
LINC01006-207ENST00000458645 USP42Q9H9J4 1324 aaKnown RBP10.47□□□□□ -0.73
LINC01006-207ENST00000458645 POLRMTO00411 1230 aaKnown RBP10.46□□□□□ -0.73
LINC01006-207ENST00000458645 POTEIP0CG38 1075 aa10.46□□□□□ -0.73
LINC01006-207ENST00000458645 POTEJP0CG39 1038 aa10.46□□□□□ -0.73
LINC01006-207ENST00000458645 HMGB2P26583 209 aaKnown RBP10.46□□□□□ -0.73
LINC01006-207ENST00000458645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.46□□□□□ -0.73
LINC01006-207ENST00000458645 U3KPZ7 1027 aaPredicted RBP10.46□□□□□ -0.73
LINC01006-207ENST00000458645 WASHC2AQ641Q2 1341 aa10.46□□□□□ -0.73
LINC01006-207ENST00000458645 TIAM2Q8IVF5 1701 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms