RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 POLR3GLQ9BT43 218 aa17.12■□□□□ 0.33
TRA2B-206ENST00000456380 SLC4A9Q96Q91 983 aa17.1■□□□□ 0.33
TRA2B-206ENST00000456380 ADCY9O60503 1353 aa17.1■□□□□ 0.33
TRA2B-206ENST00000456380 GPBP1L1Q9HC44 474 aaPredicted RBP17.09■□□□□ 0.33
TRA2B-206ENST00000456380 ERVV-2B6SEH9 535 aa17.07■□□□□ 0.32
TRA2B-206ENST00000456380 MMP10P09238 476 aa17.07■□□□□ 0.32
TRA2B-206ENST00000456380 ZNF526Q8TF50 670 aaPredicted RBP17.07■□□□□ 0.32
TRA2B-206ENST00000456380 KDRP35968 1356 aa17.07■□□□□ 0.32
TRA2B-206ENST00000456380 PLEKHG2Q9H7P9 1386 aa17.07■□□□□ 0.32
TRA2B-206ENST00000456380 TRAPPC3LQ5T215 181 aa17.06■□□□□ 0.32
TRA2B-206ENST00000456380 DCAF5Q96JK2 942 aa17.06■□□□□ 0.32
TRA2B-206ENST00000456380 RBM42Q9BTD8 480 aaKnown RBP17.06■□□□□ 0.32
TRA2B-206ENST00000456380 PANK3Q9H999 370 aa17.06■□□□□ 0.32
TRA2B-206ENST00000456380 RTCBQ9Y3I0 505 aaKnown RBP17.06■□□□□ 0.32
TRA2B-206ENST00000456380 CLSPNQ9HAW4 1339 aa17.04■□□□□ 0.32
TRA2B-206ENST00000456380 PLEKHO1Q53GL0 409 aaPredicted RBP17.04■□□□□ 0.32
TRA2B-206ENST00000456380 ARHGEF1Q92888 912 aaKnown RBP17.04■□□□□ 0.32
TRA2B-206ENST00000456380 HSP90AB1P08238 724 aaKnown RBP17.04■□□□□ 0.32
TRA2B-206ENST00000456380 HSPA5P11021 654 aaKnown RBP17.04■□□□□ 0.32
TRA2B-206ENST00000456380 RC3H1Q5TC82 1133 aaKnown RBP17.04■□□□□ 0.32
TRA2B-206ENST00000456380 NLGN1Q8N2Q7 840 aa17.04■□□□□ 0.32
TRA2B-206ENST00000456380 PCGF6Q9BYE7 350 aa17.04■□□□□ 0.32
TRA2B-206ENST00000456380 ZNF530Q6P9A1 599 aaPredicted RBP17.03■□□□□ 0.32
TRA2B-206ENST00000456380 KDM6AO15550 1401 aaPredicted RBP17.03■□□□□ 0.32
TRA2B-206ENST00000456380 PXDNLA1KZ92 1463 aa17.02■□□□□ 0.32
TRA2B-206ENST00000456380 EIF4G2P78344 907 aaKnown RBP eCLIP17.02■□□□□ 0.32
TRA2B-206ENST00000456380 AMOTQ4VCS5 1084 aa17.02■□□□□ 0.32
TRA2B-206ENST00000456380 CNTNAP4Q9C0A0 1308 aa17.02■□□□□ 0.31
TRA2B-206ENST00000456380 A0A0G2JLW4 131 aa17.01■□□□□ 0.31
TRA2B-206ENST00000456380 GYS1P13807 737 aa17.01■□□□□ 0.31
TRA2B-206ENST00000456380 ADRA2BP18089 450 aa17.01■□□□□ 0.31
TRA2B-206ENST00000456380 CABP4P57796 275 aa17.01■□□□□ 0.31
TRA2B-206ENST00000456380 TGFB2P61812 414 aa17.01■□□□□ 0.31
TRA2B-206ENST00000456380 AEBP1Q8IUX7 1158 aa17.01■□□□□ 0.31
TRA2B-206ENST00000456380 RPS6KA4O75676 772 aa17.01■□□□□ 0.31
TRA2B-206ENST00000456380 HSPA6P17066 643 aa17■□□□□ 0.31
TRA2B-206ENST00000456380 MTHFSP49914 203 aa17■□□□□ 0.31
TRA2B-206ENST00000456380 CICQ96RK0 1608 aaPredicted RBP16.99■□□□□ 0.31
TRA2B-206ENST00000456380 KIF3CO14782 793 aa16.99■□□□□ 0.31
TRA2B-206ENST00000456380 PTCD1O75127 700 aaKnown RBP16.99■□□□□ 0.31
TRA2B-206ENST00000456380 RFC4P35249 363 aa16.99■□□□□ 0.31
TRA2B-206ENST00000456380 MORC1Q86VD1 984 aa16.99■□□□□ 0.31
TRA2B-206ENST00000456380 BCS1LQ9Y276 419 aa16.99■□□□□ 0.31
TRA2B-206ENST00000456380 ZNF831Q5JPB2 1677 aa16.99■□□□□ 0.31
TRA2B-206ENST00000456380 C10orf71Q711Q0 1435 aa16.99■□□□□ 0.31
TRA2B-206ENST00000456380 NFATC2IPQ8NCF5 419 aa16.98■□□□□ 0.31
TRA2B-206ENST00000456380 KIF13BQ9NQT8 1826 aa16.97■□□□□ 0.31
TRA2B-206ENST00000456380 DPEP1P16444 411 aa16.97■□□□□ 0.31
TRA2B-206ENST00000456380 C1orf141Q5JVX7 400 aa16.97■□□□□ 0.31
TRA2B-206ENST00000456380 SULT6B1Q6IMI4 303 aa16.97■□□□□ 0.31
TRA2B-206ENST00000456380 CCDC87Q9NVE4 849 aa16.97■□□□□ 0.31
TRA2B-206ENST00000456380 KIAA1551Q9HCM1 1747 aa16.97■□□□□ 0.31
TRA2B-206ENST00000456380 PARP3Q9Y6F1 533 aa16.97■□□□□ 0.31
TRA2B-206ENST00000456380 MYH14Q7Z406 1995 aaKnown RBP16.96■□□□□ 0.31
TRA2B-206ENST00000456380 COL5A3P25940 1745 aaPredicted RBP16.96■□□□□ 0.31
TRA2B-206ENST00000456380 CRKLP46109 303 aaKnown RBP16.96■□□□□ 0.31
TRA2B-206ENST00000456380 KCNA3P22001 575 aa16.95■□□□□ 0.3
TRA2B-206ENST00000456380 IL13P35225 146 aa16.95■□□□□ 0.3
TRA2B-206ENST00000456380 N4BP2Q86UW6 1770 aaPredicted RBP16.95■□□□□ 0.3
TRA2B-206ENST00000456380 ARHGAP27Q6ZUM4 889 aa16.94■□□□□ 0.3
TRA2B-206ENST00000456380 SRP68Q9UHB9 627 aaKnown RBP16.94■□□□□ 0.3
TRA2B-206ENST00000456380 FCHSD2O94868 740 aa16.94■□□□□ 0.3
TRA2B-206ENST00000456380 IFFO2Q5TF58 517 aa16.94■□□□□ 0.3
TRA2B-206ENST00000456380 C4AP0C0L4 1744 aa16.93■□□□□ 0.3
TRA2B-206ENST00000456380 FKBP8Q14318 412 aa16.93■□□□□ 0.3
TRA2B-206ENST00000456380 KNSTRNQ9Y448 316 aa16.93■□□□□ 0.3
TRA2B-206ENST00000456380 INTS5Q6P9B9 1019 aaKnown RBP16.92■□□□□ 0.3
TRA2B-206ENST00000456380 USP42Q9H9J4 1324 aaKnown RBP16.92■□□□□ 0.3
TRA2B-206ENST00000456380 DDR1Q08345 913 aa16.91■□□□□ 0.3
TRA2B-206ENST00000456380 PCNTO95613 3336 aa16.91■□□□□ 0.3
TRA2B-206ENST00000456380 AKAP4Q5JQC9 854 aa16.91■□□□□ 0.3
TRA2B-206ENST00000456380 AMER1Q5JTC6 1135 aaPredicted RBP16.91■□□□□ 0.3
TRA2B-206ENST00000456380 LGR6Q9HBX8 967 aa16.91■□□□□ 0.3
TRA2B-206ENST00000456380 PIM2Q9P1W9 311 aa16.9■□□□□ 0.3
TRA2B-206ENST00000456380 DNAJC10Q8IXB1 793 aa16.89■□□□□ 0.29
TRA2B-206ENST00000456380 SLC52A2Q9HAB3 445 aa16.89■□□□□ 0.29
TRA2B-206ENST00000456380 NMRK2Q9NPI5 230 aa16.89■□□□□ 0.29
TRA2B-206ENST00000456380 TOMM70O94826 608 aa16.88■□□□□ 0.29
TRA2B-206ENST00000456380 TM4SF1P30408 202 aa16.88■□□□□ 0.29
TRA2B-206ENST00000456380 C9orf131Q5VYM1 1079 aa16.88■□□□□ 0.29
TRA2B-206ENST00000456380 TJP1Q07157 1748 aa16.88■□□□□ 0.29
TRA2B-206ENST00000456380 POLRMTO00411 1230 aaKnown RBP16.88■□□□□ 0.29
TRA2B-206ENST00000456380 BRCA1P38398 1863 aaKnown RBP16.87■□□□□ 0.29
TRA2B-206ENST00000456380 HMOX1P09601 288 aa16.87■□□□□ 0.29
TRA2B-206ENST00000456380 CHRNA5P30532 468 aa16.87■□□□□ 0.29
TRA2B-206ENST00000456380 SLC39A6Q13433 755 aa16.87■□□□□ 0.29
TRA2B-206ENST00000456380 DALRD3Q5D0E6 543 aaKnown RBP16.87■□□□□ 0.29
TRA2B-206ENST00000456380 RNMTO43148 476 aaKnown RBP16.86■□□□□ 0.29
TRA2B-206ENST00000456380 CYP19A1P11511 503 aaPredicted RBP16.86■□□□□ 0.29
TRA2B-206ENST00000456380 USPL1Q5W0Q7 1092 aa16.86■□□□□ 0.29
TRA2B-206ENST00000456380 SCN11AQ9UI33 1791 aa16.86■□□□□ 0.29
TRA2B-206ENST00000456380 SOS1Q07889 1333 aaPredicted RBP16.85■□□□□ 0.29
TRA2B-206ENST00000456380 ZPR1O75312 459 aa16.85■□□□□ 0.29
TRA2B-206ENST00000456380 APLP1P51693 650 aa16.85■□□□□ 0.29
TRA2B-206ENST00000456380 CCER1Q8TC90 406 aaPredicted RBP16.85■□□□□ 0.29
TRA2B-206ENST00000456380 ADAMTS7Q9UKP4 1686 aa16.84■□□□□ 0.29
TRA2B-206ENST00000456380 MTHFSDQ2M296 383 aaKnown RBP16.84■□□□□ 0.29
TRA2B-206ENST00000456380 DNAJC5GQ8N7S2 189 aa16.84■□□□□ 0.29
TRA2B-206ENST00000456380 KIF7Q2M1P5 1343 aa16.83■□□□□ 0.29
TRA2B-206ENST00000456380 MRC1P22897 1456 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms