RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 ATL3Q6DD88 541 aa4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 C10orf67Q8IYJ2 551 aa4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 KCNH5Q8NCM2 988 aa4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 YEATS4O95619 227 aa4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 NKTRP30414 1462 aaKnown RBP4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 FGD5Q6ZNL6 1462 aa4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 SURF6O75683 361 aaKnown RBP4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 CCDC175P0C221 793 aa4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 ZNF652Q9Y2D9 606 aa4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 PRPF40AO75400 957 aaKnown RBP4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 SPAG1Q07617 926 aa4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 TWISTNBQ3B726 338 aaPredicted RBP4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 TDRD9Q8NDG6 1382 aaKnown RBP4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 AIMP1Q12904 312 aaKnown RBP4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 GRIPAP1Q4V328 841 aa4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 LNPKQ9C0E8 428 aa4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 A0A087WZG4 1122 aa4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 TATP17735 454 aaPredicted RBP4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 CHD1LQ86WJ1 897 aa4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 KIF1BPQ96EK5 621 aa4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 NEUROD6Q96NK8 337 aa4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 FERP16591 822 aa4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 TTF1Q15361 905 aaPredicted RBP4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 SEPT11Q9NVA2 429 aaKnown RBP4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.67□□□□□ -1.66
PPP1R9A-208ENST00000456331 JAKMIP2Q96AA8 810 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 UBAC1Q9BSL1 405 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 TIAM1Q13009 1591 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 RBM26Q5T8P6 1007 aaKnown RBP4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 TMTC2Q8N394 836 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 ANKS4BQ8N8V4 417 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 CCDC94Q9BW85 323 aaPredicted RBP4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 EIF2S2P20042 333 aaKnown RBP4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 MCM4P33991 863 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 EIF5P55010 431 aaKnown RBP4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 AMOTQ4VCS5 1084 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 ARFGAP2Q8N6H7 521 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 KIAA1524Q8TCG1 905 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 IL16Q14005 1332 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 ARID4AP29374 1257 aaPredicted RBP4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 FAM193AP78312 1265 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 STK24Q9Y6E0 443 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 THOC2Q8NI27 1593 aaKnown RBP4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 HMGXB3Q12766 1538 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 UQCRHLA0A096LP55 91 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 NEBLO76041 1014 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 UQCRHP07919 91 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 SETSIPP0DME0 302 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 PDRG1Q9NUG6 133 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 SEC63Q9UGP8 760 aaKnown RBP4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 TOP2BQ02880 1626 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 TMEM132AQ24JP5 1023 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 CC2D2AQ9P2K1 1620 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 ANAPC15P60006 121 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 PIP4K2BP78356 416 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 CCDC110Q8TBZ0 833 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 TSNARE1Q96NA8 513 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 ARID3AQ99856 593 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 TEX13AQ9BXU3 409 aaPredicted RBP4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 CEP83Q9Y592 693 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 ANKRD62A6NC57 917 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 CCDC27Q2M243 656 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 THEMISQ8N1K5 641 aaPredicted RBP4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 IQCDQ96DY2 449 aa4.66□□□□□ -1.66
PPP1R9A-208ENST00000456331 ERBINQ96RT1 1412 aa4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 IKQ13123 557 aaPredicted RBP4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 LMBR1Q8WVP7 490 aa4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 CCDC102AQ96A19 550 aa4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 DNAJC5Q9H3Z4 198 aa4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 EIF2AK4Q9P2K8 1649 aaKnown RBP4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 OPA1O60313 960 aa4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 GABPB2Q8TAK5 448 aaPredicted RBP4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 PIBF1Q8WXW3 757 aa4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 TANGO6Q9C0B7 1094 aa4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 RALGAPBQ86X10 1494 aa4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 FSD2A1L4K1 749 aa4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 BAG4O95429 457 aaKnown RBP4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 FOXD4L5Q5VV16 416 aaPredicted RBP4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 CCDC155Q8N6L0 562 aa4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 PAF1Q8N7H5 531 aa4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 FOXD4L4Q8WXT5 416 aaPredicted RBP4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 SWAP70Q9UH65 585 aa4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 EPRSP07814 1512 aaKnown RBP4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 CCDC50Q8IVM0 306 aa4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 CEP112Q8N8E3 955 aa4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 CCDC77Q9BR77 488 aa4.65□□□□□ -1.66
PPP1R9A-208ENST00000456331 IFT140Q96RY7 1462 aa4.65□□□□□ -1.67
PPP1R9A-208ENST00000456331 ATP2A1O14983 1001 aa4.65□□□□□ -1.67
PPP1R9A-208ENST00000456331 USP5P45974 858 aa4.65□□□□□ -1.67
PPP1R9A-208ENST00000456331 STX1AQ16623 288 aa4.65□□□□□ -1.67
PPP1R9A-208ENST00000456331 CNNM1Q9NRU3 951 aa4.65□□□□□ -1.67
PPP1R9A-208ENST00000456331 RASAL2Q9UJF2 1139 aa4.65□□□□□ -1.67
PPP1R9A-208ENST00000456331 WDR97A6NE52 1622 aa4.65□□□□□ -1.67
PPP1R9A-208ENST00000456331 TOP1P11387 765 aaKnown RBP4.65□□□□□ -1.67
PPP1R9A-208ENST00000456331 KIF5BP33176 963 aa4.65□□□□□ -1.67
PPP1R9A-208ENST00000456331 SELENOOQ9BVL4 669 aa4.65□□□□□ -1.67
PPP1R9A-208ENST00000456331 MYO1BO43795 1136 aa4.65□□□□□ -1.67
PPP1R9A-208ENST00000456331 CEP63Q96MT8 703 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms