RNA–Protein interactions for RNA: ENST00000455814.2

LYRM4-202, Transcript of LYR motif containing 4, humanhuman

TSL 3

Gene LYRM4, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-202ENST00000455814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.71□□□□□ -0.53
LYRM4-202ENST00000455814 HMOX1P09601 288 aa11.71□□□□□ -0.53
LYRM4-202ENST00000455814 ADRA2BP18089 450 aa11.71□□□□□ -0.53
LYRM4-202ENST00000455814 AEBP1Q8IUX7 1158 aa11.71□□□□□ -0.53
LYRM4-202ENST00000455814 NFATC2IPQ8NCF5 419 aa11.71□□□□□ -0.53
LYRM4-202ENST00000455814 DOT1LQ8TEK3 1739 aa11.71□□□□□ -0.54
LYRM4-202ENST00000455814 GNPATO15228 680 aa11.7□□□□□ -0.54
LYRM4-202ENST00000455814 GRIN3BO60391 1043 aa11.7□□□□□ -0.54
LYRM4-202ENST00000455814 NLGN1Q8N2Q7 840 aa11.7□□□□□ -0.54
LYRM4-202ENST00000455814 PNNQ9H307 717 aaKnown RBP11.7□□□□□ -0.54
LYRM4-202ENST00000455814 CD2APQ9Y5K6 639 aa11.7□□□□□ -0.54
LYRM4-202ENST00000455814 PHF14O94880 888 aa11.69□□□□□ -0.54
LYRM4-202ENST00000455814 RFC4P35249 363 aa11.69□□□□□ -0.54
LYRM4-202ENST00000455814 CASZ1Q86V15 1759 aa11.69□□□□□ -0.54
LYRM4-202ENST00000455814 PKD1L3Q7Z443 1732 aa11.69□□□□□ -0.54
LYRM4-202ENST00000455814 TEFQ10587 303 aa11.68□□□□□ -0.54
LYRM4-202ENST00000455814 NPM2Q86SE8 214 aaKnown RBP11.68□□□□□ -0.54
LYRM4-202ENST00000455814 TTC5Q8N0Z6 440 aa11.68□□□□□ -0.54
LYRM4-202ENST00000455814 SLC52A2Q9HAB3 445 aa11.68□□□□□ -0.54
LYRM4-202ENST00000455814 PAPPAQ13219 1627 aa11.68□□□□□ -0.54
LYRM4-202ENST00000455814 LY75O60449 1722 aa11.67□□□□□ -0.54
LYRM4-202ENST00000455814 GNAT3A8MTJ3 354 aa11.67□□□□□ -0.54
LYRM4-202ENST00000455814 RNMTO43148 476 aaKnown RBP11.67□□□□□ -0.54
LYRM4-202ENST00000455814 PTCD1O75127 700 aaKnown RBP11.67□□□□□ -0.54
LYRM4-202ENST00000455814 RPS6KA4O75676 772 aa11.67□□□□□ -0.54
LYRM4-202ENST00000455814 MTHFSDQ2M296 383 aaKnown RBP11.67□□□□□ -0.54
LYRM4-202ENST00000455814 PELP1Q8IZL8 1130 aaKnown RBP11.67□□□□□ -0.54
LYRM4-202ENST00000455814 LINC00116Q8NCU8 138 aa11.67□□□□□ -0.54
LYRM4-202ENST00000455814 RTF1Q92541 710 aaKnown RBP11.67□□□□□ -0.54
LYRM4-202ENST00000455814 TEX13AQ9BXU3 409 aaPredicted RBP11.67□□□□□ -0.54
LYRM4-202ENST00000455814 SHANK3Q9BYB0 1731 aa11.66□□□□□ -0.54
LYRM4-202ENST00000455814 CNTNAP4Q9C0A0 1308 aa11.66□□□□□ -0.54
LYRM4-202ENST00000455814 FCHSD2O94868 740 aa11.66□□□□□ -0.54
LYRM4-202ENST00000455814 U2AF1L5P0DN76 240 aaPredicted RBP11.66□□□□□ -0.54
LYRM4-202ENST00000455814 U2AF1Q01081 240 aaKnown RBP eCLIP11.66□□□□□ -0.54
LYRM4-202ENST00000455814 ITPK1Q13572 414 aa11.66□□□□□ -0.54
LYRM4-202ENST00000455814 MSL1Q68DK7 614 aa11.66□□□□□ -0.54
LYRM4-202ENST00000455814 STARD3NLO95772 234 aa11.65□□□□□ -0.54
LYRM4-202ENST00000455814 PPP2R1AP30153 589 aa11.65□□□□□ -0.54
LYRM4-202ENST00000455814 VSIG10Q8N0Z9 540 aa11.65□□□□□ -0.54
LYRM4-202ENST00000455814 ZPR1O75312 459 aa11.64□□□□□ -0.55
LYRM4-202ENST00000455814 CCDC87Q9NVE4 849 aa11.64□□□□□ -0.55
LYRM4-202ENST00000455814 PARP3Q9Y6F1 533 aa11.64□□□□□ -0.55
LYRM4-202ENST00000455814 QSER1Q2KHR3 1735 aa11.63□□□□□ -0.55
LYRM4-202ENST00000455814 A0A087WZG4 1122 aa11.63□□□□□ -0.55
LYRM4-202ENST00000455814 HTATSF1O43719 755 aaKnown RBP11.63□□□□□ -0.55
LYRM4-202ENST00000455814 RALBP1Q15311 655 aa11.63□□□□□ -0.55
LYRM4-202ENST00000455814 ARHGEF1Q92888 912 aaKnown RBP11.63□□□□□ -0.55
LYRM4-202ENST00000455814 LGR6Q9HBX8 967 aa11.63□□□□□ -0.55
LYRM4-202ENST00000455814 KDM6AO15550 1401 aaPredicted RBP11.62□□□□□ -0.55
LYRM4-202ENST00000455814 PRKAR2BP31323 418 aa11.62□□□□□ -0.55
LYRM4-202ENST00000455814 TGFB2P61812 414 aa11.62□□□□□ -0.55
LYRM4-202ENST00000455814 ZNF316A6NFI3 1004 aaPredicted RBP11.61□□□□□ -0.55
LYRM4-202ENST00000455814 MMP10P09238 476 aa11.61□□□□□ -0.55
LYRM4-202ENST00000455814 CRKLP46109 303 aaKnown RBP11.61□□□□□ -0.55
LYRM4-202ENST00000455814 C5P01031 1676 aa11.61□□□□□ -0.55
LYRM4-202ENST00000455814 C4BP0C0L5 1744 aa11.6□□□□□ -0.55
LYRM4-202ENST00000455814 ITGB4P16144 1822 aa11.6□□□□□ -0.55
LYRM4-202ENST00000455814 FMNL2Q96PY5 1086 aa11.6□□□□□ -0.55
LYRM4-202ENST00000455814 SLC4A9Q96Q91 983 aa11.6□□□□□ -0.55
LYRM4-202ENST00000455814 BTBD11A6QL63 1104 aa11.59□□□□□ -0.55
LYRM4-202ENST00000455814 ZNF790Q6PG37 636 aa11.59□□□□□ -0.55
LYRM4-202ENST00000455814 DNAJC10Q8IXB1 793 aa11.59□□□□□ -0.55
LYRM4-202ENST00000455814 PNISRQ8TF01 805 aaKnown RBP11.59□□□□□ -0.55
LYRM4-202ENST00000455814 RSPH6AQ9H0K4 717 aa11.59□□□□□ -0.55
LYRM4-202ENST00000455814 MAPK8IP3Q9UPT6 1336 aa11.59□□□□□ -0.55
LYRM4-202ENST00000455814 TOGARAM1Q9Y4F4 1720 aa11.58□□□□□ -0.56
LYRM4-202ENST00000455814 SLC39A6Q13433 755 aa11.58□□□□□ -0.56
LYRM4-202ENST00000455814 IL17REQ8NFR9 667 aa11.58□□□□□ -0.56
LYRM4-202ENST00000455814 NLGN2Q8NFZ4 835 aa11.58□□□□□ -0.56
LYRM4-202ENST00000455814 CYP19A1P11511 503 aaPredicted RBP11.57□□□□□ -0.56
LYRM4-202ENST00000455814 GYS1P13807 737 aa11.57□□□□□ -0.56
LYRM4-202ENST00000455814 INTS5Q6P9B9 1019 aaKnown RBP11.57□□□□□ -0.56
LYRM4-202ENST00000455814 NARFQ9UHQ1 456 aa11.57□□□□□ -0.56
LYRM4-202ENST00000455814 CANXP27824 592 aaKnown RBP11.56□□□□□ -0.56
LYRM4-202ENST00000455814 TAF7Q15545 349 aaPredicted RBP11.56□□□□□ -0.56
LYRM4-202ENST00000455814 PHACTR3Q96KR7 559 aa11.56□□□□□ -0.56
LYRM4-202ENST00000455814 USP42Q9H9J4 1324 aaKnown RBP11.56□□□□□ -0.56
LYRM4-202ENST00000455814 ZNF831Q5JPB2 1677 aa11.55□□□□□ -0.56
LYRM4-202ENST00000455814 SNRPA1P09661 255 aaKnown RBP11.55□□□□□ -0.56
LYRM4-202ENST00000455814 IL6STP40189 918 aaPredicted RBP11.55□□□□□ -0.56
LYRM4-202ENST00000455814 DDX10Q13206 875 aaKnown RBP11.55□□□□□ -0.56
LYRM4-202ENST00000455814 SMIM5Q71RC9 77 aa11.55□□□□□ -0.56
LYRM4-202ENST00000455814 AMIGO3Q86WK7 504 aa11.55□□□□□ -0.56
LYRM4-202ENST00000455814 PDZRN3Q9UPQ7 1066 aa11.55□□□□□ -0.56
LYRM4-202ENST00000455814 SOS1Q07889 1333 aaPredicted RBP11.55□□□□□ -0.56
LYRM4-202ENST00000455814 HEG1Q9ULI3 1381 aa11.54□□□□□ -0.56
LYRM4-202ENST00000455814 TAF1LQ8IZX4 1826 aa11.54□□□□□ -0.56
LYRM4-202ENST00000455814 LMOD3Q0VAK6 560 aa11.54□□□□□ -0.56
LYRM4-202ENST00000455814 ZNF784Q8NCA9 323 aaPredicted RBP11.54□□□□□ -0.56
LYRM4-202ENST00000455814 ZNF496Q96IT1 587 aaPredicted RBP11.54□□□□□ -0.56
LYRM4-202ENST00000455814 PIM2Q9P1W9 311 aa11.54□□□□□ -0.56
LYRM4-202ENST00000455814 COL3A1P02461 1466 aaPredicted RBP11.54□□□□□ -0.56
LYRM4-202ENST00000455814 NPHP1O15259 732 aa11.53□□□□□ -0.56
LYRM4-202ENST00000455814 FKBP8Q14318 412 aa11.53□□□□□ -0.56
LYRM4-202ENST00000455814 USPL1Q5W0Q7 1092 aa11.53□□□□□ -0.56
LYRM4-202ENST00000455814 DIEXFQ68CQ4 756 aaKnown RBP11.53□□□□□ -0.56
LYRM4-202ENST00000455814 BCS1LQ9Y276 419 aa11.53□□□□□ -0.56
LYRM4-202ENST00000455814 ZNF652Q9Y2D9 606 aa11.53□□□□□ -0.56
LYRM4-202ENST00000455814 ZNF330Q9Y3S2 320 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms