RNA–Protein interactions for RNA: ENST00000454289.7

TSFM-204, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSFM, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-204ENST00000454289 CCDC30Q5VVM6 783 aa16.53■□□□□ 0.24
TSFM-204ENST00000454289 PRDM11Q9NQV5 511 aa16.53■□□□□ 0.24
TSFM-204ENST00000454289 NECTIN2Q92692 538 aa16.53■□□□□ 0.24
TSFM-204ENST00000454289 STK31Q9BXU1 1019 aa16.53■□□□□ 0.24
TSFM-204ENST00000454289 BTBD11A6QL63 1104 aa16.52■□□□□ 0.24
TSFM-204ENST00000454289 PKD1L3Q7Z443 1732 aa16.51■□□□□ 0.23
TSFM-204ENST00000454289 SMC5Q8IY18 1101 aa16.51■□□□□ 0.23
TSFM-204ENST00000454289 SCN11AQ9UI33 1791 aa16.51■□□□□ 0.23
TSFM-204ENST00000454289 C8orf34Q49A92 452 aa16.5■□□□□ 0.23
TSFM-204ENST00000454289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.5■□□□□ 0.23
TSFM-204ENST00000454289 PLEKHG2Q9H7P9 1386 aa16.5■□□□□ 0.23
TSFM-204ENST00000454289 FAM161AQ3B820 660 aa16.5■□□□□ 0.23
TSFM-204ENST00000454289 SPG7Q9UQ90 795 aa16.5■□□□□ 0.23
TSFM-204ENST00000454289 KDM6AO15550 1401 aaPredicted RBP16.5■□□□□ 0.23
TSFM-204ENST00000454289 COL5A2P05997 1499 aaPredicted RBP16.49■□□□□ 0.23
TSFM-204ENST00000454289 LTBP4Q8N2S1 1624 aa16.49■□□□□ 0.23
TSFM-204ENST00000454289 F6X3S4 739 aa16.49■□□□□ 0.23
TSFM-204ENST00000454289 PHKG2P15735 406 aa16.49■□□□□ 0.23
TSFM-204ENST00000454289 FLIIQ13045 1269 aa16.49■□□□□ 0.23
TSFM-204ENST00000454289 HDGFL1Q5TGJ6 251 aa16.49■□□□□ 0.23
TSFM-204ENST00000454289 WDR17Q8IZU2 1322 aa16.49■□□□□ 0.23
TSFM-204ENST00000454289 SIRT2Q8IXJ6 389 aa16.48■□□□□ 0.23
TSFM-204ENST00000454289 ROBO1Q9Y6N7 1651 aa16.48■□□□□ 0.23
TSFM-204ENST00000454289 HOXB7P09629 217 aa16.48■□□□□ 0.23
TSFM-204ENST00000454289 CYP27B1O15528 508 aa16.46■□□□□ 0.23
TSFM-204ENST00000454289 EIF2S2P20042 333 aaKnown RBP16.46■□□□□ 0.23
TSFM-204ENST00000454289 IFNL2Q8IZJ0 200 aa16.46■□□□□ 0.23
TSFM-204ENST00000454289 PARP4Q9UKK3 1724 aaKnown RBP16.46■□□□□ 0.22
TSFM-204ENST00000454289 FKBP5Q13451 457 aaPredicted RBP16.45■□□□□ 0.22
TSFM-204ENST00000454289 SLC4A10Q6U841 1118 aa16.45■□□□□ 0.22
TSFM-204ENST00000454289 TOM1L2Q6ZVM7 507 aa16.45■□□□□ 0.22
TSFM-204ENST00000454289 MEIS3Q99687 375 aa16.45■□□□□ 0.22
TSFM-204ENST00000454289 HEG1Q9ULI3 1381 aa16.45■□□□□ 0.22
TSFM-204ENST00000454289 CCT4P50991 539 aaKnown RBP16.45■□□□□ 0.22
TSFM-204ENST00000454289 ATP10DQ9P241 1426 aa16.45■□□□□ 0.22
TSFM-204ENST00000454289 AHDC1Q5TGY3 1603 aaPredicted RBP16.45■□□□□ 0.22
TSFM-204ENST00000454289 N4BP2Q86UW6 1770 aaPredicted RBP16.45■□□□□ 0.22
TSFM-204ENST00000454289 MSH5O43196 834 aa16.44■□□□□ 0.22
TSFM-204ENST00000454289 SLC52A2Q9HAB3 445 aa16.44■□□□□ 0.22
TSFM-204ENST00000454289 NUCB1Q02818 461 aa16.44■□□□□ 0.22
TSFM-204ENST00000454289 PHAXQ9H814 394 aaKnown RBP16.44■□□□□ 0.22
TSFM-204ENST00000454289 MRC1P22897 1456 aa16.43■□□□□ 0.22
TSFM-204ENST00000454289 GIGYF1O75420 1035 aaPredicted RBP16.43■□□□□ 0.22
TSFM-204ENST00000454289 CHPF2Q9P2E5 772 aa16.43■□□□□ 0.22
TSFM-204ENST00000454289 ANP32AP39687 249 aaKnown RBP16.43■□□□□ 0.22
TSFM-204ENST00000454289 NPM2Q86SE8 214 aaKnown RBP16.43■□□□□ 0.22
TSFM-204ENST00000454289 GCC1Q96CN9 775 aa16.43■□□□□ 0.22
TSFM-204ENST00000454289 LARP1Q6PKG0 1096 aaKnown RBP16.42■□□□□ 0.22
TSFM-204ENST00000454289 ANKRD44Q8N8A2 993 aa16.42■□□□□ 0.22
TSFM-204ENST00000454289 DCAF5Q96JK2 942 aa16.42■□□□□ 0.22
TSFM-204ENST00000454289 CARD10Q9BWT7 1032 aa16.42■□□□□ 0.22
TSFM-204ENST00000454289 STRN4Q9NRL3 753 aa16.42■□□□□ 0.22
TSFM-204ENST00000454289 PXDNLA1KZ92 1463 aa16.42■□□□□ 0.22
TSFM-204ENST00000454289 PRAMEF22A3QJZ6 481 aa16.41■□□□□ 0.22
TSFM-204ENST00000454289 SLC39A6Q13433 755 aa16.41■□□□□ 0.22
TSFM-204ENST00000454289 NFATC2IPQ8NCF5 419 aa16.41■□□□□ 0.22
TSFM-204ENST00000454289 CHMP4AQ9BY43 222 aa16.41■□□□□ 0.22
TSFM-204ENST00000454289 CEP85Q6P2H3 762 aa16.41■□□□□ 0.22
TSFM-204ENST00000454289 ANXA1P04083 346 aa16.4■□□□□ 0.22
TSFM-204ENST00000454289 ZNF790Q6PG37 636 aa16.4■□□□□ 0.22
TSFM-204ENST00000454289 CHD1LQ86WJ1 897 aa16.4■□□□□ 0.22
TSFM-204ENST00000454289 LNPKQ9C0E8 428 aa16.4■□□□□ 0.22
TSFM-204ENST00000454289 COL22A1Q8NFW1 1626 aaPredicted RBP16.4■□□□□ 0.22
TSFM-204ENST00000454289 HSP90AB1P08238 724 aaKnown RBP16.4■□□□□ 0.22
TSFM-204ENST00000454289 EVA1CP58658 441 aa16.4■□□□□ 0.22
TSFM-204ENST00000454289 RPAP2Q8IXW5 612 aaPredicted RBP16.4■□□□□ 0.22
TSFM-204ENST00000454289 ZCRB1Q8TBF4 217 aaKnown RBP16.4■□□□□ 0.22
TSFM-204ENST00000454289 C5P01031 1676 aa16.39■□□□□ 0.21
TSFM-204ENST00000454289 SHANK3Q9BYB0 1731 aa16.39■□□□□ 0.21
TSFM-204ENST00000454289 ANKRD45Q5TZF3 282 aa16.38■□□□□ 0.21
TSFM-204ENST00000454289 PCDH11XQ9BZA7 1347 aa16.38■□□□□ 0.21
TSFM-204ENST00000454289 PCDH11YQ9BZA8 1340 aa16.38■□□□□ 0.21
TSFM-204ENST00000454289 IL2RBP14784 551 aa16.38■□□□□ 0.21
TSFM-204ENST00000454289 DCTPP1Q9H773 170 aa16.38■□□□□ 0.21
TSFM-204ENST00000454289 DBF4Q9UBU7 674 aaPredicted RBP16.38■□□□□ 0.21
TSFM-204ENST00000454289 COL16A1Q07092 1604 aaPredicted RBP16.37■□□□□ 0.21
TSFM-204ENST00000454289 PROSER3Q2NL68 480 aa16.37■□□□□ 0.21
TSFM-204ENST00000454289 COL14A1Q05707 1796 aaKnown RBP16.37■□□□□ 0.21
TSFM-204ENST00000454289 BTG4Q9NY30 223 aa16.37■□□□□ 0.21
TSFM-204ENST00000454289 CABP4P57796 275 aa16.36■□□□□ 0.21
TSFM-204ENST00000454289 IPO9Q96P70 1041 aaKnown RBP16.36■□□□□ 0.21
TSFM-204ENST00000454289 ADCY9O60503 1353 aa16.36■□□□□ 0.21
TSFM-204ENST00000454289 GNAI2P04899 355 aa16.36■□□□□ 0.21
TSFM-204ENST00000454289 ZNF496Q96IT1 587 aaPredicted RBP16.36■□□□□ 0.21
TSFM-204ENST00000454289 PI4KAP2A4QPH2 592 aa16.35■□□□□ 0.21
TSFM-204ENST00000454289 GNAI3P08754 354 aa16.35■□□□□ 0.21
TSFM-204ENST00000454289 PI4KAP1Q8N8J0 262 aa16.35■□□□□ 0.21
TSFM-204ENST00000454289 PHLPP1O60346 1717 aa16.35■□□□□ 0.21
TSFM-204ENST00000454289 SEC24BO95487 1268 aa16.34■□□□□ 0.21
TSFM-204ENST00000454289 DNAAF4Q8WXU2 420 aa16.34■□□□□ 0.21
TSFM-204ENST00000454289 USP44Q9H0E7 712 aa16.34■□□□□ 0.21
TSFM-204ENST00000454289 GLI3P10071 1580 aa16.34■□□□□ 0.21
TSFM-204ENST00000454289 PDIA6Q15084 440 aa16.34■□□□□ 0.21
TSFM-204ENST00000454289 NKX1-1Q15270 411 aaPredicted RBP16.34■□□□□ 0.21
TSFM-204ENST00000454289 BEND3Q5T5X7 828 aa16.33■□□□□ 0.2
TSFM-204ENST00000454289 TTC5Q8N0Z6 440 aa16.33■□□□□ 0.2
TSFM-204ENST00000454289 SRCIN1Q9C0H9 1055 aa16.33■□□□□ 0.2
TSFM-204ENST00000454289 DDX21Q9NR30 783 aaKnown RBP eCLIP16.33■□□□□ 0.2
TSFM-204ENST00000454289 HYPKQ9NX55 129 aa16.33■□□□□ 0.2
TSFM-204ENST00000454289 USP35Q9P2H5 1018 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms