RNA–Protein interactions for RNA: ENST00000454035.5

MDH1-208, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-208ENST00000454035 OCEL1Q9H607 264 aa8.19□□□□□ -1.1
MDH1-208ENST00000454035 PRDM11Q9NQV5 511 aa8.19□□□□□ -1.1
MDH1-208ENST00000454035 ANKRD36BQ8N2N9 1353 aa8.19□□□□□ -1.1
MDH1-208ENST00000454035 KIAA0232Q92628 1395 aa8.19□□□□□ -1.1
MDH1-208ENST00000454035 SLIT3O75094 1523 aa8.19□□□□□ -1.1
MDH1-208ENST00000454035 GLI3P10071 1580 aa8.18□□□□□ -1.1
MDH1-208ENST00000454035 NRKQ7Z2Y5 1582 aa8.18□□□□□ -1.1
MDH1-208ENST00000454035 PIK3C2AO00443 1686 aa8.18□□□□□ -1.1
MDH1-208ENST00000454035 MON2Q7Z3U7 1717 aa8.18□□□□□ -1.1
MDH1-208ENST00000454035 PRIM1P49642 420 aaKnown RBP8.18□□□□□ -1.1
MDH1-208ENST00000454035 TTLL12Q14166 644 aaPredicted RBP8.18□□□□□ -1.1
MDH1-208ENST00000454035 VPS72Q15906 364 aa8.18□□□□□ -1.1
MDH1-208ENST00000454035 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.18□□□□□ -1.1
MDH1-208ENST00000454035 OXER1Q8TDS5 423 aa8.18□□□□□ -1.1
MDH1-208ENST00000454035 GJD4Q96KN9 370 aaPredicted RBP8.18□□□□□ -1.1
MDH1-208ENST00000454035 C1orf115Q9H7X2 142 aa8.18□□□□□ -1.1
MDH1-208ENST00000454035 BTG4Q9NY30 223 aa8.18□□□□□ -1.1
MDH1-208ENST00000454035 PHRF1Q9P1Y6 1649 aaKnown RBP8.18□□□□□ -1.1
MDH1-208ENST00000454035 C11orf95C9JLR9 678 aaPredicted RBP8.17□□□□□ -1.1
MDH1-208ENST00000454035 ONECUT3O60422 494 aaPredicted RBP8.17□□□□□ -1.1
MDH1-208ENST00000454035 CHRNA2Q15822 529 aa8.17□□□□□ -1.1
MDH1-208ENST00000454035 ARHGEF25Q86VW2 580 aa8.17□□□□□ -1.1
MDH1-208ENST00000454035 NME9Q86XW9 330 aa8.17□□□□□ -1.1
MDH1-208ENST00000454035 KCNH5Q8NCM2 988 aa8.17□□□□□ -1.1
MDH1-208ENST00000454035 CARD14Q9BXL6 1004 aa8.17□□□□□ -1.1
MDH1-208ENST00000454035 PLCH1Q4KWH8 1693 aa8.17□□□□□ -1.1
MDH1-208ENST00000454035 NWD2Q9ULI1 1742 aa8.17□□□□□ -1.1
MDH1-208ENST00000454035 COL14A1Q05707 1796 aaKnown RBP8.17□□□□□ -1.1
MDH1-208ENST00000454035 PSDA5PKW4 1024 aaPredicted RBP8.16□□□□□ -1.1
MDH1-208ENST00000454035 SNPHO15079 494 aa8.16□□□□□ -1.1
MDH1-208ENST00000454035 FYB1O15117 783 aa8.16□□□□□ -1.1
MDH1-208ENST00000454035 AATKQ6ZMQ8 1374 aa8.16□□□□□ -1.1
MDH1-208ENST00000454035 USP54Q70EL1 1684 aa8.15□□□□□ -1.1
MDH1-208ENST00000454035 OVOS2A0A0J9YW53 1432 aa8.15□□□□□ -1.1
MDH1-208ENST00000454035 OVOS2Q6IE36 1432 aa8.15□□□□□ -1.1
MDH1-208ENST00000454035 TBC1D12O60347 775 aa8.15□□□□□ -1.1
MDH1-208ENST00000454035 PTGDRQ13258 359 aa8.15□□□□□ -1.1
MDH1-208ENST00000454035 TMEM92Q6UXU6 159 aa8.15□□□□□ -1.1
MDH1-208ENST00000454035 PODXL2Q9NZ53 605 aa8.15□□□□□ -1.1
MDH1-208ENST00000454035 NRAPQ86VF7 1730 aa8.15□□□□□ -1.11
MDH1-208ENST00000454035 CAMTA1Q9Y6Y1 1673 aa8.14□□□□□ -1.11
MDH1-208ENST00000454035 NFAT5O94916 1531 aa8.14□□□□□ -1.11
MDH1-208ENST00000454035 BLMP54132 1417 aaPredicted RBP8.14□□□□□ -1.11
MDH1-208ENST00000454035 SPATA31A5Q5VU36 1347 aa8.14□□□□□ -1.11
MDH1-208ENST00000454035 SPATA31A7Q8IWB4 1347 aa8.14□□□□□ -1.11
MDH1-208ENST00000454035 EVI5O60447 810 aa8.14□□□□□ -1.11
MDH1-208ENST00000454035 FLIIQ13045 1269 aa8.14□□□□□ -1.11
MDH1-208ENST00000454035 IER5LQ5T953 404 aa8.14□□□□□ -1.11
MDH1-208ENST00000454035 GIGYF2Q6Y7W6 1299 aaKnown RBP8.14□□□□□ -1.11
MDH1-208ENST00000454035 CCDC125Q86Z20 511 aa8.14□□□□□ -1.11
MDH1-208ENST00000454035 KRTAP3-3Q9BYR6 98 aa8.14□□□□□ -1.11
MDH1-208ENST00000454035 KRTAP3-2Q9BYR7 98 aa8.14□□□□□ -1.11
MDH1-208ENST00000454035 AXIN2Q9Y2T1 843 aa8.14□□□□□ -1.11
MDH1-208ENST00000454035 MYOM1P52179 1685 aa8.14□□□□□ -1.11
MDH1-208ENST00000454035 LMO7Q8WWI1 1683 aa8.14□□□□□ -1.11
MDH1-208ENST00000454035 SPATA31A1Q5TZJ5 1347 aa8.13□□□□□ -1.11
MDH1-208ENST00000454035 APBB1O00213 710 aa8.13□□□□□ -1.11
MDH1-208ENST00000454035 MS4A1P11836 297 aa8.13□□□□□ -1.11
MDH1-208ENST00000454035 EVA1CP58658 441 aa8.13□□□□□ -1.11
MDH1-208ENST00000454035 COG3Q96JB2 828 aa8.13□□□□□ -1.11
MDH1-208ENST00000454035 REPIN1Q9BWE0 567 aaKnown RBP8.13□□□□□ -1.11
MDH1-208ENST00000454035 GOPCQ9HD26 462 aa8.13□□□□□ -1.11
MDH1-208ENST00000454035 COL18A1P39060 1754 aa8.12□□□□□ -1.11
MDH1-208ENST00000454035 RGPD1P0DJD0 1748 aa8.12□□□□□ -1.11
MDH1-208ENST00000454035 KIF7Q2M1P5 1343 aa8.12□□□□□ -1.11
MDH1-208ENST00000454035 SF3B2Q13435 895 aaKnown RBP8.12□□□□□ -1.11
MDH1-208ENST00000454035 LARP1Q6PKG0 1096 aaKnown RBP8.12□□□□□ -1.11
MDH1-208ENST00000454035 SEPT12Q8IYM1 358 aa8.12□□□□□ -1.11
MDH1-208ENST00000454035 POLR3GLQ9BT43 218 aa8.12□□□□□ -1.11
MDH1-208ENST00000454035 GGNBP2Q9H3C7 697 aa8.12□□□□□ -1.11
MDH1-208ENST00000454035 PANK3Q9H999 370 aa8.12□□□□□ -1.11
MDH1-208ENST00000454035 STRN4Q9NRL3 753 aa8.12□□□□□ -1.11
MDH1-208ENST00000454035 CCDC9Q9Y3X0 531 aaKnown RBP8.12□□□□□ -1.11
MDH1-208ENST00000454035 COL5A2P05997 1499 aaPredicted RBP8.12□□□□□ -1.11
MDH1-208ENST00000454035 NSD3Q9BZ95 1437 aa8.12□□□□□ -1.11
MDH1-208ENST00000454035 PLCG2P16885 1265 aa8.11□□□□□ -1.11
MDH1-208ENST00000454035 FAM98CQ17RN3 349 aaKnown RBP8.11□□□□□ -1.11
MDH1-208ENST00000454035 L3MBTL3Q96JM7 780 aaPredicted RBP8.11□□□□□ -1.11
MDH1-208ENST00000454035 THRAP3Q9Y2W1 955 aaKnown RBP8.11□□□□□ -1.11
MDH1-208ENST00000454035 ABCC6O95255 1503 aa8.11□□□□□ -1.11
MDH1-208ENST00000454035 TNS1Q9HBL0 1735 aaKnown RBP8.11□□□□□ -1.11
MDH1-208ENST00000454035 CGNL1Q0VF96 1302 aa8.1□□□□□ -1.11
MDH1-208ENST00000454035 WDR17Q8IZU2 1322 aa8.1□□□□□ -1.11
MDH1-208ENST00000454035 ZBTB7CA1YPR0 619 aa8.1□□□□□ -1.11
MDH1-208ENST00000454035 FBLN1P23142 703 aa8.1□□□□□ -1.11
MDH1-208ENST00000454035 TCP11L2Q8N4U5 519 aa8.1□□□□□ -1.11
MDH1-208ENST00000454035 IP6K1Q92551 441 aa8.1□□□□□ -1.11
MDH1-208ENST00000454035 MAP3K19Q56UN5 1328 aa8.09□□□□□ -1.11
MDH1-208ENST00000454035 WASHC2AQ641Q2 1341 aa8.09□□□□□ -1.11
MDH1-208ENST00000454035 PER1O15534 1290 aaPredicted RBP8.09□□□□□ -1.11
MDH1-208ENST00000454035 PCMTD1Q96MG8 357 aaPredicted RBP8.09□□□□□ -1.11
MDH1-208ENST00000454035 CARD10Q9BWT7 1032 aa8.09□□□□□ -1.11
MDH1-208ENST00000454035 CRB1P82279 1406 aa8.09□□□□□ -1.11
MDH1-208ENST00000454035 CCDC7Q96M83 1385 aa8.09□□□□□ -1.12
MDH1-208ENST00000454035 ERBB3P21860 1342 aa8.08□□□□□ -1.12
MDH1-208ENST00000454035 A0A0G2JS52 829 aa8.08□□□□□ -1.12
MDH1-208ENST00000454035 HOXC9P31274 260 aa8.08□□□□□ -1.12
MDH1-208ENST00000454035 EMP3P54852 163 aa8.08□□□□□ -1.12
MDH1-208ENST00000454035 MYT1Q01538 1121 aa8.08□□□□□ -1.12
MDH1-208ENST00000454035 TOM1L2Q6ZVM7 507 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms