RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 ASAP1Q9ULH1 1129 aa12.23□□□□□ -0.45
DEPDC1B-202ENST00000453022 KDRP35968 1356 aa12.23□□□□□ -0.45
DEPDC1B-202ENST00000453022 HMGB2P26583 209 aaKnown RBP12.22□□□□□ -0.45
DEPDC1B-202ENST00000453022 ITPK1Q13572 414 aa12.22□□□□□ -0.45
DEPDC1B-202ENST00000453022 TMOD3Q9NYL9 352 aa12.22□□□□□ -0.45
DEPDC1B-202ENST00000453022 MYH14Q7Z406 1995 aaKnown RBP12.22□□□□□ -0.45
DEPDC1B-202ENST00000453022 ADCY9O60503 1353 aa12.22□□□□□ -0.45
DEPDC1B-202ENST00000453022 BRCA1P38398 1863 aaKnown RBP12.22□□□□□ -0.45
DEPDC1B-202ENST00000453022 CICQ96RK0 1608 aaPredicted RBP12.22□□□□□ -0.45
DEPDC1B-202ENST00000453022 PLEKHG2Q9H7P9 1386 aa12.22□□□□□ -0.45
DEPDC1B-202ENST00000453022 ATP10DQ9P241 1426 aa12.22□□□□□ -0.45
DEPDC1B-202ENST00000453022 SSFA2P28290 1259 aa12.22□□□□□ -0.45
DEPDC1B-202ENST00000453022 TNNT2P45379 298 aaPredicted RBP12.22□□□□□ -0.45
DEPDC1B-202ENST00000453022 IGSF1Q8N6C5 1336 aa12.21□□□□□ -0.45
DEPDC1B-202ENST00000453022 SCN11AQ9UI33 1791 aa12.21□□□□□ -0.45
DEPDC1B-202ENST00000453022 IFNL2Q8IZJ0 200 aa12.21□□□□□ -0.46
DEPDC1B-202ENST00000453022 POLR3GLQ9BT43 218 aa12.21□□□□□ -0.46
DEPDC1B-202ENST00000453022 CLSPNQ9HAW4 1339 aa12.21□□□□□ -0.46
DEPDC1B-202ENST00000453022 KDM6AO15550 1401 aaPredicted RBP12.2□□□□□ -0.46
DEPDC1B-202ENST00000453022 TJP1Q07157 1748 aa12.2□□□□□ -0.46
DEPDC1B-202ENST00000453022 ATG3Q9NT62 314 aa12.2□□□□□ -0.46
DEPDC1B-202ENST00000453022 GNPATO15228 680 aa12.19□□□□□ -0.46
DEPDC1B-202ENST00000453022 ATP6V1AP38606 617 aa12.19□□□□□ -0.46
DEPDC1B-202ENST00000453022 SLC4A9Q96Q91 983 aa12.18□□□□□ -0.46
DEPDC1B-202ENST00000453022 WWC3Q9ULE0 1092 aa12.18□□□□□ -0.46
DEPDC1B-202ENST00000453022 PXDNLA1KZ92 1463 aa12.18□□□□□ -0.46
DEPDC1B-202ENST00000453022 ADAMTS7Q9UKP4 1686 aa12.17□□□□□ -0.46
DEPDC1B-202ENST00000453022 HSPA5P11021 654 aaKnown RBP12.17□□□□□ -0.46
DEPDC1B-202ENST00000453022 PANK3Q9H999 370 aa12.17□□□□□ -0.46
DEPDC1B-202ENST00000453022 ARFGEF1Q9Y6D6 1849 aa12.16□□□□□ -0.46
DEPDC1B-202ENST00000453022 PCGF6Q9BYE7 350 aa12.16□□□□□ -0.46
DEPDC1B-202ENST00000453022 C10orf71Q711Q0 1435 aa12.15□□□□□ -0.46
DEPDC1B-202ENST00000453022 ERVV-2B6SEH9 535 aa12.15□□□□□ -0.46
DEPDC1B-202ENST00000453022 MMP10P09238 476 aa12.15□□□□□ -0.46
DEPDC1B-202ENST00000453022 EIF4G2P78344 907 aaKnown RBP eCLIP12.15□□□□□ -0.46
DEPDC1B-202ENST00000453022 AEBP1Q8IUX7 1158 aa12.15□□□□□ -0.46
DEPDC1B-202ENST00000453022 DCAF5Q96JK2 942 aa12.15□□□□□ -0.46
DEPDC1B-202ENST00000453022 ZNF530Q6P9A1 599 aaPredicted RBP12.14□□□□□ -0.47
DEPDC1B-202ENST00000453022 CNTNAP4Q9C0A0 1308 aa12.14□□□□□ -0.47
DEPDC1B-202ENST00000453022 ZNF526Q8TF50 670 aaPredicted RBP12.13□□□□□ -0.47
DEPDC1B-202ENST00000453022 RBM42Q9BTD8 480 aaKnown RBP12.13□□□□□ -0.47
DEPDC1B-202ENST00000453022 GPBP1L1Q9HC44 474 aaPredicted RBP12.13□□□□□ -0.47
DEPDC1B-202ENST00000453022 RTCBQ9Y3I0 505 aaKnown RBP12.13□□□□□ -0.47
DEPDC1B-202ENST00000453022 HSP90AB1P08238 724 aaKnown RBP12.13□□□□□ -0.47
DEPDC1B-202ENST00000453022 PLEKHO1Q53GL0 409 aaPredicted RBP12.13□□□□□ -0.47
DEPDC1B-202ENST00000453022 ARHGEF1Q92888 912 aaKnown RBP12.13□□□□□ -0.47
DEPDC1B-202ENST00000453022 TRAPPC3LQ5T215 181 aa12.12□□□□□ -0.47
DEPDC1B-202ENST00000453022 RC3H1Q5TC82 1133 aaKnown RBP12.12□□□□□ -0.47
DEPDC1B-202ENST00000453022 AFDNP55196 1824 aaKnown RBP12.11□□□□□ -0.47
DEPDC1B-202ENST00000453022 RPS6KA4O75676 772 aa12.11□□□□□ -0.47
DEPDC1B-202ENST00000453022 GYS1P13807 737 aa12.11□□□□□ -0.47
DEPDC1B-202ENST00000453022 CABP4P57796 275 aa12.11□□□□□ -0.47
DEPDC1B-202ENST00000453022 AMOTQ4VCS5 1084 aa12.11□□□□□ -0.47
DEPDC1B-202ENST00000453022 UBR2Q8IWV8 1755 aa12.11□□□□□ -0.47
DEPDC1B-202ENST00000453022 MRC1P22897 1456 aa12.11□□□□□ -0.47
DEPDC1B-202ENST00000453022 MORC1Q86VD1 984 aa12.1□□□□□ -0.47
DEPDC1B-202ENST00000453022 NLGN1Q8N2Q7 840 aa12.1□□□□□ -0.47
DEPDC1B-202ENST00000453022 A0A0G2JLW4 131 aa12.09□□□□□ -0.47
DEPDC1B-202ENST00000453022 PTCD1O75127 700 aaKnown RBP12.09□□□□□ -0.47
DEPDC1B-202ENST00000453022 NPM3O75607 178 aaKnown RBP12.09□□□□□ -0.47
DEPDC1B-202ENST00000453022 IL13P35225 146 aa12.09□□□□□ -0.47
DEPDC1B-202ENST00000453022 MTHFSP49914 203 aa12.09□□□□□ -0.47
DEPDC1B-202ENST00000453022 SULT6B1Q6IMI4 303 aa12.09□□□□□ -0.47
DEPDC1B-202ENST00000453022 CNKSR2Q8WXI2 1034 aa12.09□□□□□ -0.47
DEPDC1B-202ENST00000453022 SBF1O95248 1867 aa12.09□□□□□ -0.47
DEPDC1B-202ENST00000453022 RFC4P35249 363 aa12.09□□□□□ -0.47
DEPDC1B-202ENST00000453022 CRKLP46109 303 aaKnown RBP12.09□□□□□ -0.47
DEPDC1B-202ENST00000453022 TGFB2P61812 414 aa12.09□□□□□ -0.47
DEPDC1B-202ENST00000453022 C1orf141Q5JVX7 400 aa12.09□□□□□ -0.47
DEPDC1B-202ENST00000453022 NFATC2IPQ8NCF5 419 aa12.09□□□□□ -0.47
DEPDC1B-202ENST00000453022 DLEC1Q9Y238 1755 aa12.08□□□□□ -0.48
DEPDC1B-202ENST00000453022 KCPQ6ZWJ8 1503 aa12.08□□□□□ -0.48
DEPDC1B-202ENST00000453022 NRXN2Q9P2S2 1712 aa12.08□□□□□ -0.48
DEPDC1B-202ENST00000453022 KIF3CO14782 793 aa12.08□□□□□ -0.48
DEPDC1B-202ENST00000453022 AMER1Q5JTC6 1135 aaPredicted RBP12.08□□□□□ -0.48
DEPDC1B-202ENST00000453022 CCDC87Q9NVE4 849 aa12.08□□□□□ -0.48
DEPDC1B-202ENST00000453022 SRP68Q9UHB9 627 aaKnown RBP12.08□□□□□ -0.48
DEPDC1B-202ENST00000453022 USP42Q9H9J4 1324 aaKnown RBP12.07□□□□□ -0.48
DEPDC1B-202ENST00000453022 SIPA1L3O60292 1781 aaPredicted RBP12.07□□□□□ -0.48
DEPDC1B-202ENST00000453022 DPEP1P16444 411 aa12.07□□□□□ -0.48
DEPDC1B-202ENST00000453022 BCS1LQ9Y276 419 aa12.07□□□□□ -0.48
DEPDC1B-202ENST00000453022 HSPA6P17066 643 aa12.06□□□□□ -0.48
DEPDC1B-202ENST00000453022 KCNA3P22001 575 aa12.06□□□□□ -0.48
DEPDC1B-202ENST00000453022 DDR1Q08345 913 aa12.06□□□□□ -0.48
DEPDC1B-202ENST00000453022 KNSTRNQ9Y448 316 aa12.06□□□□□ -0.48
DEPDC1B-202ENST00000453022 PARP3Q9Y6F1 533 aa12.06□□□□□ -0.48
DEPDC1B-202ENST00000453022 FKBP8Q14318 412 aa12.05□□□□□ -0.48
DEPDC1B-202ENST00000453022 INTS5Q6P9B9 1019 aaKnown RBP12.05□□□□□ -0.48
DEPDC1B-202ENST00000453022 KIF7Q2M1P5 1343 aa12.05□□□□□ -0.48
DEPDC1B-202ENST00000453022 AKAP4Q5JQC9 854 aa12.05□□□□□ -0.48
DEPDC1B-202ENST00000453022 LGR6Q9HBX8 967 aa12.05□□□□□ -0.48
DEPDC1B-202ENST00000453022 WDR90Q96KV7 1748 aa12.04□□□□□ -0.48
DEPDC1B-202ENST00000453022 COL3A1P02461 1466 aaPredicted RBP12.04□□□□□ -0.48
DEPDC1B-202ENST00000453022 TNRC6CQ9HCJ0 1690 aaKnown RBP12.04□□□□□ -0.48
DEPDC1B-202ENST00000453022 CCDC88AQ3V6T2 1871 aa12.04□□□□□ -0.48
DEPDC1B-202ENST00000453022 FCHSD2O94868 740 aa12.04□□□□□ -0.48
DEPDC1B-202ENST00000453022 ARHGAP27Q6ZUM4 889 aa12.04□□□□□ -0.48
DEPDC1B-202ENST00000453022 DNAJC10Q8IXB1 793 aa12.04□□□□□ -0.48
DEPDC1B-202ENST00000453022 SLC52A2Q9HAB3 445 aa12.04□□□□□ -0.48
DEPDC1B-202ENST00000453022 SCN7AQ01118 1682 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms