RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 TNS4Q8IZW8 715 aa9.09□□□□□ -0.95
HMGB1P26-201ENST00000452520 MEIOBQ8N635 442 aa9.09□□□□□ -0.95
HMGB1P26-201ENST00000452520 CNKSR1Q969H4 720 aa9.09□□□□□ -0.95
HMGB1P26-201ENST00000452520 ZNF395Q9H8N7 513 aaPredicted RBP9.09□□□□□ -0.95
HMGB1P26-201ENST00000452520 NRG2O14511 850 aaPredicted RBP9.08□□□□□ -0.96
HMGB1P26-201ENST00000452520 LGR5O75473 907 aa9.08□□□□□ -0.96
HMGB1P26-201ENST00000452520 DGAT1O75907 488 aa9.08□□□□□ -0.96
HMGB1P26-201ENST00000452520 SSFA2P28290 1259 aa9.08□□□□□ -0.96
HMGB1P26-201ENST00000452520 PHLDB3Q6NSJ2 640 aa9.08□□□□□ -0.96
HMGB1P26-201ENST00000452520 AEBP1Q8IUX7 1158 aa9.08□□□□□ -0.96
HMGB1P26-201ENST00000452520 ESYT1Q9BSJ8 1104 aa9.08□□□□□ -0.96
HMGB1P26-201ENST00000452520 TSEN34Q9BSV6 310 aaKnown RBP9.08□□□□□ -0.96
HMGB1P26-201ENST00000452520 HRH3Q9Y5N1 445 aa9.08□□□□□ -0.96
HMGB1P26-201ENST00000452520 PRMT3O60678 531 aa9.07□□□□□ -0.96
HMGB1P26-201ENST00000452520 SMTNP53814 917 aa9.07□□□□□ -0.96
HMGB1P26-201ENST00000452520 PRIMPOLQ96LW4 560 aa9.07□□□□□ -0.96
HMGB1P26-201ENST00000452520 A6NJY4 79 aa9.06□□□□□ -0.96
HMGB1P26-201ENST00000452520 MEN1O00255 615 aa9.06□□□□□ -0.96
HMGB1P26-201ENST00000452520 ATP2B4P23634 1241 aa9.06□□□□□ -0.96
HMGB1P26-201ENST00000452520 EPHA4P54764 986 aa9.06□□□□□ -0.96
HMGB1P26-201ENST00000452520 CENPCQ03188 943 aa9.06□□□□□ -0.96
HMGB1P26-201ENST00000452520 TRIM26Q12899 539 aaPredicted RBP9.06□□□□□ -0.96
HMGB1P26-201ENST00000452520 OCLNQ16625 522 aa9.06□□□□□ -0.96
HMGB1P26-201ENST00000452520 NLRP3Q96P20 1036 aa9.06□□□□□ -0.96
HMGB1P26-201ENST00000452520 WEE1P30291 646 aa9.05□□□□□ -0.96
HMGB1P26-201ENST00000452520 MTFR1Q15390 333 aa9.05□□□□□ -0.96
HMGB1P26-201ENST00000452520 PKDCCQ504Y2 493 aa9.05□□□□□ -0.96
HMGB1P26-201ENST00000452520 B4GALNT3Q6L9W6 998 aa9.05□□□□□ -0.96
HMGB1P26-201ENST00000452520 CDK2AP1O14519 115 aa9.04□□□□□ -0.96
HMGB1P26-201ENST00000452520 SMCPP49901 116 aaPredicted RBP9.04□□□□□ -0.96
HMGB1P26-201ENST00000452520 SCHIP1Q9P0W5 487 aaPredicted RBP9.04□□□□□ -0.96
HMGB1P26-201ENST00000452520 ATAD2Q6PL18 1390 aa9.03□□□□□ -0.96
HMGB1P26-201ENST00000452520 SPINT1O43278 529 aa9.03□□□□□ -0.96
HMGB1P26-201ENST00000452520 UPP2O95045 317 aa9.03□□□□□ -0.96
HMGB1P26-201ENST00000452520 FOXK2Q01167 660 aa9.03□□□□□ -0.96
HMGB1P26-201ENST00000452520 KCNA1Q09470 495 aa9.03□□□□□ -0.96
HMGB1P26-201ENST00000452520 LAPTM4AQ15012 233 aa9.03□□□□□ -0.96
HMGB1P26-201ENST00000452520 TLR1Q15399 786 aa9.03□□□□□ -0.96
HMGB1P26-201ENST00000452520 CTC1Q2NKJ3 1217 aa9.03□□□□□ -0.96
HMGB1P26-201ENST00000452520 LINC00528Q8N1L1 170 aa9.03□□□□□ -0.96
HMGB1P26-201ENST00000452520 SCG3Q8WXD2 468 aaKnown RBP9.03□□□□□ -0.96
HMGB1P26-201ENST00000452520 INSM2Q96T92 566 aaPredicted RBP9.03□□□□□ -0.96
HMGB1P26-201ENST00000452520 FHDC1Q9C0D6 1143 aaPredicted RBP9.03□□□□□ -0.96
HMGB1P26-201ENST00000452520 TSPAN10Q9H1Z9 355 aaPredicted RBP9.03□□□□□ -0.96
HMGB1P26-201ENST00000452520 CXXC1Q9P0U4 656 aaPredicted RBP9.03□□□□□ -0.96
HMGB1P26-201ENST00000452520 ZBTB7CA1YPR0 619 aa9.02□□□□□ -0.97
HMGB1P26-201ENST00000452520 C21orf2O43822 256 aa9.02□□□□□ -0.97
HMGB1P26-201ENST00000452520 MRPL14Q6P1L8 145 aaKnown RBP9.02□□□□□ -0.97
HMGB1P26-201ENST00000452520 GAS2L2Q8NHY3 880 aa9.02□□□□□ -0.97
HMGB1P26-201ENST00000452520 C1orf216Q8TAB5 229 aa9.02□□□□□ -0.97
HMGB1P26-201ENST00000452520 BMP2P12643 396 aa9.01□□□□□ -0.97
HMGB1P26-201ENST00000452520 IGFBP4P22692 258 aa9.01□□□□□ -0.97
HMGB1P26-201ENST00000452520 RNF144AP50876 292 aaPredicted RBP9.01□□□□□ -0.97
HMGB1P26-201ENST00000452520 TBCELQ5QJ74 424 aa9.01□□□□□ -0.97
HMGB1P26-201ENST00000452520 TAS1R3Q7RTX0 852 aa9.01□□□□□ -0.97
HMGB1P26-201ENST00000452520 SLC9A9Q8IVB4 645 aa9.01□□□□□ -0.97
HMGB1P26-201ENST00000452520 GRIP2Q9C0E4 1043 aa9.01□□□□□ -0.97
HMGB1P26-201ENST00000452520 IQSEC3Q9UPP2 1182 aaPredicted RBP9.01□□□□□ -0.97
HMGB1P26-201ENST00000452520 PATL2C9JE40 543 aaKnown RBP9□□□□□ -0.97
HMGB1P26-201ENST00000452520 AXIN1O15169 862 aa9□□□□□ -0.97
HMGB1P26-201ENST00000452520 ARID4AP29374 1257 aaPredicted RBP9□□□□□ -0.97
HMGB1P26-201ENST00000452520 GPC1P35052 558 aa9□□□□□ -0.97
HMGB1P26-201ENST00000452520 CTSOP43234 321 aaPredicted RBP9□□□□□ -0.97
HMGB1P26-201ENST00000452520 C6orf118Q5T5N4 469 aa9□□□□□ -0.97
HMGB1P26-201ENST00000452520 CRIPAKQ8N1N5 446 aa9□□□□□ -0.97
HMGB1P26-201ENST00000452520 SCNN1AP37088 669 aa8.99□□□□□ -0.97
HMGB1P26-201ENST00000452520 PPARGC1BQ86YN6 1023 aaKnown RBP8.99□□□□□ -0.97
HMGB1P26-201ENST00000452520 PURBQ96QR8 312 aaKnown RBP8.99□□□□□ -0.97
HMGB1P26-201ENST00000452520 ZSCAN10Q96SZ4 725 aaPredicted RBP8.99□□□□□ -0.97
HMGB1P26-201ENST00000452520 POLMQ9NP87 494 aaPredicted RBP8.99□□□□□ -0.97
HMGB1P26-201ENST00000452520 USP3Q9Y6I4 520 aa8.99□□□□□ -0.97
HMGB1P26-201ENST00000452520 PPP1R12BO60237 982 aaPredicted RBP8.98□□□□□ -0.97
HMGB1P26-201ENST00000452520 BMP1P13497 986 aa8.98□□□□□ -0.97
HMGB1P26-201ENST00000452520 FKBP5Q13451 457 aaPredicted RBP8.98□□□□□ -0.97
HMGB1P26-201ENST00000452520 SCARF1Q14162 830 aa8.98□□□□□ -0.97
HMGB1P26-201ENST00000452520 SLC27A3Q5K4L6 730 aa8.98□□□□□ -0.97
HMGB1P26-201ENST00000452520 TMEM214Q6NUQ4 689 aaKnown RBP8.98□□□□□ -0.97
HMGB1P26-201ENST00000452520 TRIM46Q7Z4K8 759 aa8.98□□□□□ -0.97
HMGB1P26-201ENST00000452520 TXNDC2Q86VQ3 553 aa8.98□□□□□ -0.97
HMGB1P26-201ENST00000452520 STAG2Q8N3U4 1231 aa8.98□□□□□ -0.97
HMGB1P26-201ENST00000452520 CHMP7Q8WUX9 453 aaPredicted RBP8.98□□□□□ -0.97
HMGB1P26-201ENST00000452520 FOXO3O43524 673 aa8.97□□□□□ -0.97
HMGB1P26-201ENST00000452520 FOXD4L5Q5VV16 416 aaPredicted RBP8.97□□□□□ -0.97
HMGB1P26-201ENST00000452520 ZNF295-AS1Q8N0V1 137 aa8.97□□□□□ -0.97
HMGB1P26-201ENST00000452520 AAASQ9NRG9 546 aa8.97□□□□□ -0.97
HMGB1P26-201ENST00000452520 GNEQ9Y223 722 aaKnown RBP8.97□□□□□ -0.97
HMGB1P26-201ENST00000452520 GTF2E1P29083 439 aaPredicted RBP8.96□□□□□ -0.98
HMGB1P26-201ENST00000452520 TEAD4Q15561 434 aa8.96□□□□□ -0.98
HMGB1P26-201ENST00000452520 CAPN12Q6ZSI9 719 aa8.96□□□□□ -0.98
HMGB1P26-201ENST00000452520 NBPF15Q8N660 670 aa8.96□□□□□ -0.98
HMGB1P26-201ENST00000452520 CCER1Q8TC90 406 aaPredicted RBP8.96□□□□□ -0.98
HMGB1P26-201ENST00000452520 C2orf49Q9BVC5 232 aaPredicted RBP8.96□□□□□ -0.98
HMGB1P26-201ENST00000452520 IRX2Q9BZI1 471 aaPredicted RBP8.96□□□□□ -0.98
HMGB1P26-201ENST00000452520 NOS2P35228 1153 aa8.95□□□□□ -0.98
HMGB1P26-201ENST00000452520 PSMA6P60900 246 aaKnown RBP8.95□□□□□ -0.98
HMGB1P26-201ENST00000452520 RHBDD1Q8TEB9 315 aa8.95□□□□□ -0.98
HMGB1P26-201ENST00000452520 COL26A1Q96A83 441 aa8.95□□□□□ -0.98
HMGB1P26-201ENST00000452520 ZFP42Q96MM3 310 aa8.95□□□□□ -0.98
HMGB1P26-201ENST00000452520 NIFKQ9BYG3 293 aaKnown RBP8.95□□□□□ -0.98
HMGB1P26-201ENST00000452520 CABP1Q9NZU7 370 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms